FFCP PHASE1:Hg19::chr11:8739473..8739489,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6764|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11350|TSSclassifier=S|UniProt=|association_with_transcript=-90bp_to_ENST00000531060_5end|description=CAGE_peak_8_at_ST5_5end|id=chr11:8739473..8739489,-|ontology_enrichment_celltype=CL:0000055!2.78e-19!180;CL:0000057!3.09e-13!75;CL:0002620!1.68e-09!23;CL:0000222!1.68e-08!119;CL:0000243!3.22e-08!15;CL:0000125!3.22e-08!15;CL:0000030!3.22e-08!15;CL:0000339!3.22e-08!15;CL:0000220!7.84e-07!246;CL:0000128!9.68e-07!7;CL:0000126!9.68e-07!7;CL:0000127!9.68e-07!7;CL:0002453!9.68e-07!7|ontology_enrichment_celltype_v019=CL:0000128;4.08e-15;7!CL:0000126;4.08e-15;7!CL:0000127;4.08e-15;7!CL:0002620;1.06e-09;23!CL:0002603;1.18e-07;3!CL:0000243;2.19e-07;15!CL:0000125;2.19e-07;15!CL:0002605;2.91e-07;3|ontology_enrichment_celltype_v019_2=CL:0000128,2.43e-16,7;CL:0000126,2.43e-16,7;CL:0000127,2.43e-16,7;CL:0002453,2.43e-16,7;CL:0002620,1.22e-09,23;CL:0002603,4.94e-08,3;CL:0000243,6.43e-08,15;CL:0000125,6.43e-08,15;CL:0000030,6.43e-08,15;CL:0000339,6.43e-08,15;CL:0002605,7.91e-08,3;CL:0000095,6.31e-07,17;CL:0000123,6.31e-07,17|ontology_enrichment_development_v019=CL:0000339;2.19e-07;15|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:17;2.63e-07;5!DOID:450;2.63e-07;5!DOID:66;2.63e-07;5!DOID:423;2.63e-07;5!DOID:0080000;2.63e-07;5!DOID:11722;2.63e-07;5|ontology_enrichment_disease_v019_2=DOID:17,2.63e-07,5;DOID:450,2.63e-07,5;DOID:66,2.63e-07,5;DOID:423,2.63e-07,5;DOID:0080000,2.63e-07,5;DOID:11722,2.63e-07,5|ontology_enrichment_uberon=UBERON:0000475!2.84e-14!365;UBERON:0005256!5.66e-12!143;UBERON:0000490!6.49e-10!138;UBERON:0002100!9.46e-10!216;UBERON:0000119!2.68e-08!312;UBERON:0000481!3.21e-08!347;UBERON:0000483!1.11e-07!309;UBERON:0000477!1.17e-07!286;UBERON:0000468!8.24e-07!659|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=1.09007027562334,1.07050261945492,1.12763523276777,0,0,0.872338524100369,5.06599756336621,0,0,0.245733936501509,2.79120467188971,0,0,1.48519623552056,0.662794751455832,0,0.602694528023977,0,0.487932798790507,1.84681587115182,1.42800483870977,2.82109249330279,1.43117993565528,1.77936752594749,1.88313959392204,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.383587685530591,0,1.00267582127178,0.289693037921647,0,0.486634870302636,0.567208902984407,0.665188192387692,0.351339142772504,0.327447688744282,0,0,0,0,0,0,0,0,0.79504962946682,0,0.347140501607594,0.56530794192401,0,0,0.835979866147242,0,0,0,1.20848795132744,0,0.24406205754817,0.367663080345869,0,0.982297011124877,1.34717623575702,0.788280363383256,1.53316637465883,0.949265659568129,0.916008719652036,0,0,0.436094052142534,0,0.25326102332916,0,0.573673241497627,0,0,0,0,0.622422070799533,0.67355336034844,0.653847612453835,0.454072282934794,0.576175924479999,0.468642863667593,0,0.570471821544449,0.149448680551801,0.352303495931295,0.809364721840658,0.842704840213491,0.204154171254893,0.859840221182376,0.516628905878827,1.18800285728205,0.494533858557114,4.55080680969013,1.43723628363248,0.168336113954066,1.12606667884768,0.831192346452549,0.438977620880838,0.919463387397059,0.751190294532984,0.567160915800105,1.25572744982203,1.70845911054854,1.05965950579781,0.600182192168805,1.64884046781502,2.06112432036503,1.30281799432113,0.337552664482532,1.16924406193438,1.7670364197088,3.31379635112278,0.323292113637624,1.77504796258307,1.0075209822764,0.67824236924195,0.193260853163297,0,0,0,0,0.232387885739037,0.310983165046111,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,2.80483547606892,1.2347220339942,0,0,0,0,0,0.122988438543114,0.857839051492628,0,0,0,0.185176890317059,0,0,0,1.27523445472584,0.352226082707465,0.433099343283221,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672786506072164,0.43596006883328,1.10007428731425,0.775630294546667,10.7296933755565,0.845302752556,0.797814349754612,0,0.514414748524284,0,0.266422179016099,0.714889968290738,1.62786481617433,3.29296134712308,0.325736184293735,1.42156779497018,0.791951872933429,0,0,0,0,0,0,0.239624855491583,0,0,0.289562613335158,1.02738161275192,0.895304816199478,0,0,0,0,0.254094624222463,1.30139853857622,0,0,0,0,0,0,1.2269149171914,1.50051156317903,0,3.11956292296211,1.60586089917446,1.26161932027148,1.99140405487612,0.300946099727719,0,1.03473071292505,0.664225598535437,0,0.60818530127658,1.76221041716467,0.686286847621712,0,0,0,0,0,0.30239029332968,0.496215615637554,0.61384789315225,0.841980283299221,0.384417447767103,0,0.321707842287215,0,0.154209693802656,0,0.246381468041427,0.519254429183621,0.116210378459959,0.241718899183244,0,0,0.229628896329213,0.364182336013434,0.262248829918848,0.902399225814824,0.0770153371044148,0,1.46139224653261,0.527758144464379,2.27466768141793,0.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6764 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11350 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-90bp_to_ENST00000531060_5end | |||
|description=CAGE_peak_8_at_ST5_5end | |||
|id=chr11:8739473..8739489,- | |||
|ontology_enrichment_celltype=CL:0000055!2.78e-19!180;CL:0000057!3.09e-13!75;CL:0002620!1.68e-09!23;CL:0000222!1.68e-08!119;CL:0000243!3.22e-08!15;CL:0000125!3.22e-08!15;CL:0000030!3.22e-08!15;CL:0000339!3.22e-08!15;CL:0000220!7.84e-07!246;CL:0000128!9.68e-07!7;CL:0000126!9.68e-07!7;CL:0000127!9.68e-07!7;CL:0002453!9.68e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000128;4.08e-15;7!CL:0000126;4.08e-15;7!CL:0000127;4.08e-15;7!CL:0002620;1.06e-09;23!CL:0002603;1.18e-07;3!CL:0000243;2.19e-07;15!CL:0000125;2.19e-07;15!CL:0002605;2.91e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,2.43e-16,7;CL:0000126,2.43e-16,7;CL:0000127,2.43e-16,7;CL:0002453,2.43e-16,7;CL:0002620,1.22e-09,23;CL:0002603,4.94e-08,3;CL:0000243,6.43e-08,15;CL:0000125,6.43e-08,15;CL:0000030,6.43e-08,15;CL:0000339,6.43e-08,15;CL:0002605,7.91e-08,3;CL:0000095,6.31e-07,17;CL:0000123,6.31e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000339;2.19e-07;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;2.63e-07;5!DOID:450;2.63e-07;5!DOID:66;2.63e-07;5!DOID:423;2.63e-07;5!DOID:0080000;2.63e-07;5!DOID:11722;2.63e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.63e-07,5;DOID:450,2.63e-07,5;DOID:66,2.63e-07,5;DOID:423,2.63e-07,5;DOID:0080000,2.63e-07,5;DOID:11722,2.63e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000475!2.84e-14!365;UBERON:0005256!5.66e-12!143;UBERON:0000490!6.49e-10!138;UBERON:0002100!9.46e-10!216;UBERON:0000119!2.68e-08!312;UBERON:0000481!3.21e-08!347;UBERON:0000483!1.11e-07!309;UBERON:0000477!1.17e-07!286;UBERON:0000468!8.24e-07!659 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p8@ST5 | |||
}} |
Revision as of 20:05, 10 September 2013
Short description: | p8@ST5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_ST5_5end |
Coexpression cluster: | NA |
Association with transcript: | -90bp_to_ENST00000531060_5end |
EntrezGene: | ST5 |
HGNC: | 11350 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 2.43e-16 | 7 |
macroglial cell | 2.43e-16 | 7 |
astrocyte | 2.43e-16 | 7 |
oligodendrocyte precursor cell | 2.43e-16 | 7 |
skin fibroblast | 1.22e-09 | 23 |
astrocyte of the cerebellum | 4.94e-08 | 3 |
glial cell (sensu Vertebrata) | 6.43e-08 | 15 |
glial cell | 6.43e-08 | 15 |
glioblast | 6.43e-08 | 15 |
glioblast (sensu Vertebrata) | 6.43e-08 | 15 |
astrocyte of the cerebral cortex | 7.91e-08 | 3 |
neuron associated cell | 6.31e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 6.31e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.63e-07 | 5 |
myotonic disease | 2.63e-07 | 5 |
muscle tissue disease | 2.63e-07 | 5 |
myopathy | 2.63e-07 | 5 |
muscular disease | 2.63e-07 | 5 |
myotonic dystrophy | 2.63e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.