FFCP PHASE1:Hg19::chr12:32974832..32974843,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5318|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9024|TSSclassifier=S|UniProt=|association_with_transcript=-84bp_to_ENST00000549461_5end|coexpression_cluster_id=C380|description=CAGE_peak_9_at_PKP2_5end|id=chr12:32974832..32974843,-|ontology_enrichment_celltype=CL:0000946!6.80e-07!1;CL:0000786!6.80e-07!1;CL:0000980!6.80e-07!1|ontology_enrichment_celltype_v019=CL:0000222;1.11e-25;1|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0010227;3.58e-26;1!UBERON:0010226;3.58e-26;1!UBERON:0005062;5.94e-26;4!UBERON:0007284;5.94e-26;4!UBERON:0004140;7.62e-26;1|ontology_enrichment_disease=DOID:114!3.18e-12!2;DOID:178!6.43e-07!1;DOID:326!6.43e-07!1;DOID:3978!6.43e-07!1;DOID:3394!6.43e-07!1;DOID:5844!6.43e-07!1|ontology_enrichment_disease_v019=DOID:114;1.46e-13;2!DOID:1287;1.98e-07;4|ontology_enrichment_disease_v019_2=DOID:114,1.37e-13,2;DOID:1287,1.92e-07,4|ontology_enrichment_uberon=UBERON:0007100!8.07e-19!27;UBERON:0001893!8.11e-16!34;UBERON:0007023!8.95e-16!115;UBERON:0001950!7.97e-15!20;UBERON:0001869!6.46e-14!32;UBERON:0000200!6.63e-14!6;UBERON:0002791!1.64e-13!33;UBERON:0002619!1.97e-13!22;UBERON:0002780!7.78e-13!41;UBERON:0001890!7.78e-13!41;UBERON:0006240!7.78e-13!41;UBERON:0003080!1.73e-12!42;UBERON:0000956!9.61e-12!25;UBERON:0000203!9.61e-12!25;UBERON:0000955!2.60e-11!69;UBERON:0006238!2.60e-11!69;UBERON:0002020!1.43e-10!34;UBERON:0003528!1.43e-10!34;UBERON:0000948!1.73e-10!24;UBERON:0005498!1.73e-10!24;UBERON:0004140!1.73e-10!24;UBERON:0009881!1.73e-10!24;UBERON:0004141!1.73e-10!24;UBERON:0003084!1.73e-10!24;UBERON:0007005!1.73e-10!24;UBERON:0004139!1.73e-10!24;UBERON:0004291!1.73e-10!24;UBERON:0001049!1.88e-10!57;UBERON:0005068!1.88e-10!57;UBERON:0006241!1.88e-10!57;UBERON:0007135!1.88e-10!57;UBERON:0002616!5.00e-10!59;UBERON:0001017!3.97e-09!82;UBERON:0003075!7.04e-09!86;UBERON:0007284!7.04e-09!86;UBERON:0003978!1.33e-08!3;UBERON:0009751!1.33e-08!3;UBERON:0004151!1.33e-08!3;UBERON:0000946!1.33e-08!3;UBERON:0002523!1.33e-08!3;UBERON:0005983!1.33e-08!3;UBERON:0002165!1.33e-08!3;UBERON:0002062!1.33e-08!3;UBERON:0007280!1.33e-08!3;UBERON:0005743!1.38e-08!86;UBERON:0002346!2.29e-08!90;UBERON:0003056!4.84e-08!61;UBERON:0002771!5.44e-08!3;UBERON:0003103!1.40e-07!69;UBERON:0000073!1.55e-07!94;UBERON:0001016!1.55e-07!94;UBERON:0000025!2.15e-07!194;UBERON:0002146!4.09e-07!1;UBERON:0005623!4.09e-07!1;UBERON:0002084!4.33e-07!1;UBERON:0002082!4.33e-07!1;UBERON:0004706!4.33e-07!1;UBERON:0002079!4.58e-07!1;UBERON:0002135!4.85e-07!1;UBERON:0000989!7.19e-07!1;UBERON:0008811!7.19e-07!1;UBERON:0006258!7.19e-07!1;UBERON:0005876!7.19e-07!1;UBERON:0004874!7.19e-07!1|ontology_enrichment_uberon_v019=UBERON:0007100;2.58e-48;25!UBERON:0003978;3.33e-34;3!UBERON:0000946;3.33e-34;3!UBERON:0004151;4.66e-34;3!UBERON:0000948;1.86e-28;22!UBERON:0002146;2.16e-26;1!UBERON:0005623;2.16e-26;1!UBERON:0002084;3.58e-26;1!UBERON:0002079;3.58e-26;1!UBERON:0002135;3.58e-26;1!UBERON:0002082;3.58e-26;1!UBERON:0002081;8.28e-14;2!UBERON:0002133;8.28e-14;2!UBERON:0010313;5.15e-11;10!UBERON:0003103;2.78e-10;61|ontology_enrichment_uberon_v019_2=UBERON:0007100,8.95e-45,27;UBERON:0003978,3.94e-34,3;UBERON:0009751,3.94e-34,3;UBERON:0004151,3.94e-34,3;UBERON:0000946,3.94e-34,3;UBERON:0002523,3.94e-34,3;UBERON:0005983,3.94e-34,3;UBERON:0002165,3.94e-34,3;UBERON:0002062,3.94e-34,3;UBERON:0007280,3.94e-34,3;UBERON:0002146,2.16e-26,1;UBERON:0005623,2.16e-26,1;UBERON:0002084,2.78e-26,1;UBERON:0002082,2.78e-26,1;UBERON:0010226,2.78e-26,1;UBERON:0002079,3.58e-26,1;UBERON:0000948,4.02e-26,24;UBERON:0005498,4.02e-26,24;UBERON:0004140,4.02e-26,24;UBERON:0009881,4.02e-26,24;UBERON:0004141,4.02e-26,24;UBERON:0003084,4.02e-26,24;UBERON:0007005,4.02e-26,24;UBERON:0004139,4.02e-26,24;UBERON:0004291,4.02e-26,24;UBERON:0002135,4.61e-26,1;UBERON:0003103,6.69e-18,68;UBERON:0004797,2.85e-15,7;UBERON:0002081,8.28e-14,2;UBERON:0010227,8.28e-14,2;UBERON:0002133,9.40e-14,2;UBERON:0010313,5.41e-11,10;UBERON:0002342,5.41e-11,10;UBERON:0005062,5.41e-11,10;UBERON:0001009,6.96e-11,112;UBERON:0007023,6.07e-08,114;UBERON:0004872,9.69e-08,83|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5318 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9024 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-84bp_to_ENST00000549461_5end | |||
|coexpression_cluster_id=C380 | |||
|description=CAGE_peak_9_at_PKP2_5end | |||
|id=chr12:32974832..32974843,- | |||
|ontology_enrichment_celltype=CL:0000946!6.80e-07!1;CL:0000786!6.80e-07!1;CL:0000980!6.80e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000222;1.11e-25;1 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;3.58e-26;1!UBERON:0010226;3.58e-26;1!UBERON:0005062;5.94e-26;4!UBERON:0007284;5.94e-26;4!UBERON:0004140;7.62e-26;1 | |||
|ontology_enrichment_disease=DOID:114!3.18e-12!2;DOID:178!6.43e-07!1;DOID:326!6.43e-07!1;DOID:3978!6.43e-07!1;DOID:3394!6.43e-07!1;DOID:5844!6.43e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:114;1.46e-13;2!DOID:1287;1.98e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.37e-13,2;DOID:1287,1.92e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007100!8.07e-19!27;UBERON:0001893!8.11e-16!34;UBERON:0007023!8.95e-16!115;UBERON:0001950!7.97e-15!20;UBERON:0001869!6.46e-14!32;UBERON:0000200!6.63e-14!6;UBERON:0002791!1.64e-13!33;UBERON:0002619!1.97e-13!22;UBERON:0002780!7.78e-13!41;UBERON:0001890!7.78e-13!41;UBERON:0006240!7.78e-13!41;UBERON:0003080!1.73e-12!42;UBERON:0000956!9.61e-12!25;UBERON:0000203!9.61e-12!25;UBERON:0000955!2.60e-11!69;UBERON:0006238!2.60e-11!69;UBERON:0002020!1.43e-10!34;UBERON:0003528!1.43e-10!34;UBERON:0000948!1.73e-10!24;UBERON:0005498!1.73e-10!24;UBERON:0004140!1.73e-10!24;UBERON:0009881!1.73e-10!24;UBERON:0004141!1.73e-10!24;UBERON:0003084!1.73e-10!24;UBERON:0007005!1.73e-10!24;UBERON:0004139!1.73e-10!24;UBERON:0004291!1.73e-10!24;UBERON:0001049!1.88e-10!57;UBERON:0005068!1.88e-10!57;UBERON:0006241!1.88e-10!57;UBERON:0007135!1.88e-10!57;UBERON:0002616!5.00e-10!59;UBERON:0001017!3.97e-09!82;UBERON:0003075!7.04e-09!86;UBERON:0007284!7.04e-09!86;UBERON:0003978!1.33e-08!3;UBERON:0009751!1.33e-08!3;UBERON:0004151!1.33e-08!3;UBERON:0000946!1.33e-08!3;UBERON:0002523!1.33e-08!3;UBERON:0005983!1.33e-08!3;UBERON:0002165!1.33e-08!3;UBERON:0002062!1.33e-08!3;UBERON:0007280!1.33e-08!3;UBERON:0005743!1.38e-08!86;UBERON:0002346!2.29e-08!90;UBERON:0003056!4.84e-08!61;UBERON:0002771!5.44e-08!3;UBERON:0003103!1.40e-07!69;UBERON:0000073!1.55e-07!94;UBERON:0001016!1.55e-07!94;UBERON:0000025!2.15e-07!194;UBERON:0002146!4.09e-07!1;UBERON:0005623!4.09e-07!1;UBERON:0002084!4.33e-07!1;UBERON:0002082!4.33e-07!1;UBERON:0004706!4.33e-07!1;UBERON:0002079!4.58e-07!1;UBERON:0002135!4.85e-07!1;UBERON:0000989!7.19e-07!1;UBERON:0008811!7.19e-07!1;UBERON:0006258!7.19e-07!1;UBERON:0005876!7.19e-07!1;UBERON:0004874!7.19e-07!1 | |||
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|short_description=p9@PKP2 | |||
}} |
Revision as of 22:30, 10 September 2013
Short description: | p9@PKP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_PKP2_5end |
Coexpression cluster: | C380_heart_left_throat_skeletal_mesothelioma_aorta_Mesothelial |
Association with transcript: | -84bp_to_ENST00000549461_5end |
EntrezGene: | PKP2 |
HGNC: | 9024 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 1.37e-13 | 2 |
cardiovascular system disease | 1.92e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.