FFCP PHASE1:Hg19::chr12:50135333..50135346,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7009|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11723|TSSclassifier=S|UniProt=P55061,B7Z984,F8W201,F8W1G3,F8VR05,F8W034|association_with_transcript=0bp_to_ENST00000267115,ENST00000541612,ENST00000546914,ENST00000548894,ENST00000552635,ENST00000552699_5end|description=CAGE_peak_1_at_TMBIM6_5end|id=chr12:50135333..50135346,+|ontology_enrichment_celltype=CL:0002194!1.23e-16!63;CL:0000576!1.23e-16!63;CL:0000040!1.23e-16!63;CL:0000559!1.23e-16!63;CL:0000766!2.00e-16!76;CL:0002009!2.28e-16!65;CL:0000860!1.24e-14!45;CL:0002057!1.32e-14!42;CL:0000839!2.41e-14!70;CL:0000063!2.64e-13!578;CL:0000557!3.06e-13!71;CL:0000548!3.10e-12!679;CL:0000004!3.10e-12!679;CL:0000255!3.10e-12!679;CL:0000003!1.27e-11!722;CL:0000012!1.71e-11!682;CL:0000144!1.12e-08!625;CL:0002371!1.71e-08!591|ontology_enrichment_celltype_v019=CL:0000473;1.25e-14;39!CL:0000234;1.25e-14;39!CL:0000860;2.81e-14;33!CL:0002057;2.81e-14;33!CL:0000576;2.45e-09;48!CL:0000766;3.27e-07;69|ontology_enrichment_celltype_v019_2=CL:0000473,6.17e-18,48;CL:0000234,6.17e-18,48;CL:0002194,4.00e-17,59;CL:0000576,4.00e-17,59;CL:0000040,4.00e-17,59;CL:0000559,4.00e-17,59;CL:0002009,8.08e-17,61;CL:0000766,9.11e-17,72;CL:0000839,1.17e-14,66;CL:0000860,1.32e-14,42;CL:0002057,1.32e-14,42;CL:0000557,1.66e-13,67;CL:0000066,9.82e-07,253|ontology_enrichment_development_v019=CL:0002057;8.25e-11;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!4.16e-13!80;UBERON:0002390!5.43e-12!102;UBERON:0003061!5.43e-12!102;UBERON:0001474!1.20e-11!86;UBERON:0002405!1.22e-11!115;UBERON:0002193!1.98e-11!112;UBERON:0004765!2.94e-10!101;UBERON:0001434!2.94e-10!101;UBERON:0000926!5.15e-10!448;UBERON:0004120!5.15e-10!448;UBERON:0006603!5.15e-10!448;UBERON:0000062!1.86e-07!511;UBERON:0000467!2.56e-07!625;UBERON:0000468!2.61e-07!659;UBERON:0000480!2.91e-07!626|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.62e-13,76;UBERON:0004765,1.61e-12,90;UBERON:0002390,4.50e-12,98;UBERON:0003061,4.50e-12,98;UBERON:0001474,8.95e-12,82;UBERON:0002193,1.79e-11,108;UBERON:0002405,7.47e-11,93;UBERON:0001434,4.38e-10,100|phase1_expression=753.783595593539,599.053265846971,874.199214203213,558.409004810468,623.957687820494,657.743247171678,582.589719787114,769.43480583388,651.135771102197,736.464607695022,411.702689103732,674.765398510102,499.83842374292,621.059559153514,341.339296999753,564.08079787304,564.122078230442,586.439002581061,480.613806808649,603.908789866645,306.613038940112,408.431502085948,626.570575829883,383.522139054222,440.905750256947,241.007881729038,228.568041028649,220.547609240929,582.179129736378,409.162138371629,429.924374448743,353.977171424387,365.663985396796,488.445047430326,230.077585723496,171.45609437983,285.379627033471,334.059231344722,332.903782800435,286.454349344924,1118.23387835418,974.596041051109,904.862969098897,647.749153762961,629.541322185557,501.906422597592,712.162569079018,741.335702103352,790.680364895199,837.184861657458,642.451051974984,1032.00845123379,734.997791330471,615.146903455386,719.114643815955,778.193831669128,851.194282030421,1031.70551708738,1026.91145890438,1103.03306606053,897.629324621854,623.418957352893,647.060105324574,560.911771701025,1117.01535948142,814.765182656477,1023.91977734873,685.155110155139,653.939579698933,880.049198745133,923.839641018521,1218.63069748285,1277.55865809885,751.435053411577,697.554708185308,682.229232484255,644.991000043175,711.988648961581,599.345712793412,447.184994930019,592.970614730488,613.020900034111,323.833089808834,368.097423990677,358.472229307013,328.582271376211,376.772623800888,332.781662733646,372.168263377877,342.505297878196,243.053937809734,298.903729389808,269.502625828286,189.004999868007,315.005812395623,286.825268320059,244.903663791722,212.618822647298,260.497099232378,377.005547105979,296.915184903201,289.276609303922,303.929696316342,525.857356498019,394.182704201332,423.129738654716,496.654286145039,317.538381599949,322.677241296058,310.952077605552,332.725421414161,466.87277111917,335.720778998905,328.807677722257,315.69728189103,469.667225481412,305.809953894333,362.183327538692,477.448158840802,353.289044485423,348.98073126704,345.01409213476,375.23319674181,463.055559156686,429.76169934007,394.707679157376,336.662478737629,307.248676674492,201.115027229198,187.692427432107,199.921630377449,394.372105505738,561.188783931255,437.341374385325,462.734891516926,396.734615433696,540.794443994747,310.959682123384,423.043306809204,301.330251151624,305.225880283613,704.143509875703,688.153799584612,508.345471057453,1014.53515256454,1015.00223871743,714.781995749419,618.167698199446,543.395165241122,603.246982159213,391.164417697676,267.532959078005,364.150386186366,262.30288505274,338.955544457604,276.493632149768,342.751745120369,453.521412342172,482.063285940492,511.118375691651,553.084652390859,428.0331955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807,453.188587642529,606.366045159336,378.310135818147,255.053837386053,277.284013182272,229.320095221164,112.171904818665,416.534131591984,300.667652166507,217.009518793915,647.087908077262,553.160032777555,590.823515838328,560.761583493742,409.604370531738,176.732141071386,352.280629367923,433.737963590167,265.040460276425,647.875115312234,497.884626209184,500.486979910856,902.809262441278,351.195440015652,253.069303950887,304.656338042745,373.455706231917,160.263619042338,841.575672125775,279.366893433173,260.113570407879,427.109795599167,180.531518690983,283.487177830469,255.532519383622,243.82620693724,522.279555517617,359.184339211364,483.939162632395,399.797969369724,367.801349763452,520.407481412112,316.564569784829,421.50790860726,254.055908894175,277.749713843965,91.3158720509496,787.487925174312,934.960053194957,486.32640657797,184.401884892092,241.433440489596,181.855752828498,137.092643368873,359.312828658706,310.195472879707,99.5413913012292,1230.88047358481,492.852783042805,566.413501434121,468.689464561358,538.630247947062,710.372623171293,571.412285508505,788.916360469829,1313.44642623918,1027.03660005064,100.351469764124,256.554354333761,175.131979132068,305.02650364114,420.857094768328,162.542783306838,318.586923193106,473.244083743242,426.569204972265,317.021971490014,983.275948453323,488.262058165841,695.128964022331,235.832685527257,217.293776427699,365.133748833798,560.823603817538,383.348744918144,295.503252442114,424.525357514999,407.438309880981,482.316018493707,532.626398860677,347.601448639956,612.6428346718,198.651497603053,550.016410802044,482.194357721482,291.246303808619,417.943690203553,137.450467457219,585.103685610033,494.753374161779,580.954765189693,583.613232304991,274.664306865967,236.23216658551,366.158667923053,514.329668388814,394.680107577233,353.611573410083,298.592679297219,381.166852037744,299.315933384451,382.247111590497,443.934418239254,379.982955747548,253.538619508883,355.497359737378,337.872669912355,260.258053049604,910.727187802262,311.866822562532,342.033010946126,325.463869332102,442.637692411869,652.528624662569,289.414510195032,269.282012565104,367.995888586363,69.5060216232984,557.994155486118,309.72604397256,408.775389347505,213.620493615763,256.982114835608,332.705580805966,247.478876058096|short_description=p1@TMBIM6}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=7009 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11723 | |||
|TSSclassifier=S | |||
|UniProt=P55061,B7Z984,F8W201,F8W1G3,F8VR05,F8W034 | |||
|association_with_transcript=0bp_to_ENST00000267115,ENST00000541612,ENST00000546914,ENST00000548894,ENST00000552635,ENST00000552699_5end | |||
|description=CAGE_peak_1_at_TMBIM6_5end | |||
|id=chr12:50135333..50135346,+ | |||
|ontology_enrichment_celltype=CL:0002194!1.23e-16!63;CL:0000576!1.23e-16!63;CL:0000040!1.23e-16!63;CL:0000559!1.23e-16!63;CL:0000766!2.00e-16!76;CL:0002009!2.28e-16!65;CL:0000860!1.24e-14!45;CL:0002057!1.32e-14!42;CL:0000839!2.41e-14!70;CL:0000063!2.64e-13!578;CL:0000557!3.06e-13!71;CL:0000548!3.10e-12!679;CL:0000004!3.10e-12!679;CL:0000255!3.10e-12!679;CL:0000003!1.27e-11!722;CL:0000012!1.71e-11!682;CL:0000144!1.12e-08!625;CL:0002371!1.71e-08!591 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.25e-14;39!CL:0000234;1.25e-14;39!CL:0000860;2.81e-14;33!CL:0002057;2.81e-14;33!CL:0000576;2.45e-09;48!CL:0000766;3.27e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,6.17e-18,48;CL:0000234,6.17e-18,48;CL:0002194,4.00e-17,59;CL:0000576,4.00e-17,59;CL:0000040,4.00e-17,59;CL:0000559,4.00e-17,59;CL:0002009,8.08e-17,61;CL:0000766,9.11e-17,72;CL:0000839,1.17e-14,66;CL:0000860,1.32e-14,42;CL:0002057,1.32e-14,42;CL:0000557,1.66e-13,67;CL:0000066,9.82e-07,253 | |||
|ontology_enrichment_development_v019=CL:0002057;8.25e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.16e-13!80;UBERON:0002390!5.43e-12!102;UBERON:0003061!5.43e-12!102;UBERON:0001474!1.20e-11!86;UBERON:0002405!1.22e-11!115;UBERON:0002193!1.98e-11!112;UBERON:0004765!2.94e-10!101;UBERON:0001434!2.94e-10!101;UBERON:0000926!5.15e-10!448;UBERON:0004120!5.15e-10!448;UBERON:0006603!5.15e-10!448;UBERON:0000062!1.86e-07!511;UBERON:0000467!2.56e-07!625;UBERON:0000468!2.61e-07!659;UBERON:0000480!2.91e-07!626 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.62e-13,76;UBERON:0004765,1.61e-12,90;UBERON:0002390,4.50e-12,98;UBERON:0003061,4.50e-12,98;UBERON:0001474,8.95e-12,82;UBERON:0002193,1.79e-11,108;UBERON:0002405,7.47e-11,93;UBERON:0001434,4.38e-10,100 | |||
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| |||
|short_description=p1@TMBIM6 | |||
}} |
Revision as of 22:55, 10 September 2013
Short description: | p1@TMBIM6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TMBIM6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000267115, ENST00000541612, ENST00000546914, ENST00000548894, ENST00000552635, ENST00000552699_5end |
EntrezGene: | TMBIM6 |
HGNC: | 11723 |
UniProt: | P55061B7Z984F8W201F8W1G3F8VR05F8W034 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 6.17e-18 | 48 |
phagocyte | 6.17e-18 | 48 |
monopoietic cell | 4.00e-17 | 59 |
monocyte | 4.00e-17 | 59 |
monoblast | 4.00e-17 | 59 |
promonocyte | 4.00e-17 | 59 |
macrophage dendritic cell progenitor | 8.08e-17 | 61 |
myeloid leukocyte | 9.11e-17 | 72 |
myeloid lineage restricted progenitor cell | 1.17e-14 | 66 |
classical monocyte | 1.32e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.32e-14 | 42 |
granulocyte monocyte progenitor cell | 1.66e-13 | 67 |
epithelial cell | 9.82e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.62e-13 | 76 |
skeletal element | 1.61e-12 | 90 |
hematopoietic system | 4.50e-12 | 98 |
blood island | 4.50e-12 | 98 |
bone element | 8.95e-12 | 82 |
hemolymphoid system | 1.79e-11 | 108 |
immune system | 7.47e-11 | 93 |
skeletal system | 4.38e-10 | 100 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.