FFCP PHASE1:Hg19::chr12:52585791..52585806,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=144501|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=27056|TSSclassifier=S|UniProt=Q6KB66|association_with_transcript=-7bp_to_ENST00000313234,ENST00000394815,NM_001081492,NM_182507,uc001rzx.2,uc001rzy.2_5end|description=CAGE_peak_1_at_KRT80_5end|id=chr12:52585791..52585806,-|ontology_enrichment_celltype=CL:0000066!7.95e-53!254;CL:0000076!5.98e-16!62;CL:0000223!3.30e-14!59;CL:0002076!1.75e-13!43;CL:0000077!6.11e-10!19;CL:0000220!3.92e-09!246;CL:0002321!5.76e-09!248|ontology_enrichment_celltype_v019=CL:0000077;7.45e-12;19!CL:0002076;5.39e-10;42!CL:1000507;1.54e-08;10!CL:1000494;1.54e-08;10!CL:0000076;3.31e-08;63!CL:1000497;4.87e-08;17!CL:0002518;4.87e-08;17!CL:0002368;1.15e-07;13!CL:1000449;5.67e-07;15|ontology_enrichment_celltype_v019_2=CL:0000066,2.03e-56,253;CL:0000076,4.15e-17,63;CL:0000223,5.92e-15,58;CL:0002076,1.91e-14,42;CL:0000077,7.73e-12,19;CL:1000507,1.61e-08,10;CL:1000494,1.61e-08,10;CL:1000497,3.81e-08,17;CL:0002518,3.81e-08,17;CL:0002368,1.41e-07,13;CL:0002321,2.57e-07,250;CL:1000449,5.07e-07,15|ontology_enrichment_development_v019=UBERON:0008947;1.13e-09;29!UBERON:0006595;4.98e-08;86!CL:0000223;6.16e-08;58|ontology_enrichment_disease=DOID:305!3.36e-31!106;DOID:0050687!5.62e-25!143;DOID:162!3.87e-17!235;DOID:14566!4.97e-16!239;DOID:299!2.44e-10!25;DOID:1749!2.44e-09!14;DOID:7!1.10e-07!39|ontology_enrichment_disease_v019=DOID:299;8.85e-14;25!DOID:1749;1.03e-11;14!DOID:305;1.44e-09;106|ontology_enrichment_disease_v019_2=DOID:305,1.20e-37,106;DOID:0050687,6.55e-28,143;DOID:162,7.70e-22,235;DOID:14566,1.33e-20,239;DOID:299,9.08e-14,25;DOID:1749,9.87e-12,14;DOID:7,6.29e-07,39|ontology_enrichment_uberon=UBERON:0004119!2.11e-20!169;UBERON:0000925!2.11e-20!169;UBERON:0006595!2.11e-20!169;UBERON:0001007!1.11e-17!155;UBERON:0001555!1.11e-17!155;UBERON:0007026!1.11e-17!155;UBERON:0001041!2.00e-17!98;UBERON:0000077!3.70e-17!130;UBERON:0004921!6.62e-17!129;UBERON:0004185!6.62e-17!129;UBERON:0000466!5.86e-16!126;UBERON:0001004!7.66e-16!72;UBERON:0000464!1.88e-13!104;UBERON:0005177!2.78e-13!107;UBERON:0001048!8.15e-13!168;UBERON:0005911!1.38e-12!82;UBERON:0000065!2.10e-12!53;UBERON:0003104!3.07e-11!238;UBERON:0009142!3.07e-11!238;UBERON:0000072!6.15e-11!46;UBERON:0008947!1.12e-10!38;UBERON:0003258!1.12e-10!38;UBERON:0009569!3.30e-10!113;UBERON:0000062!9.84e-09!511;UBERON:0000481!1.00e-08!347;UBERON:0000058!1.18e-08!26;UBERON:0002553!1.52e-08!70;UBERON:0001008!2.72e-08!45;UBERON:0000475!2.74e-08!365;UBERON:0006554!5.70e-08!44;UBERON:0000161!1.14e-07!35;UBERON:0003064!1.83e-07!37;UBERON:0002100!3.62e-07!216;UBERON:0005153!3.71e-07!37;UBERON:0000063!5.62e-07!97|ontology_enrichment_uberon_v019=UBERON:0000072;2.41e-09;37!UBERON:0006554;4.56e-09;30!UBERON:0001008;4.56e-09;30!UBERON:0001004;8.14e-09;65!UBERON:0000065;9.29e-09;44!UBERON:0004211;1.54e-08;10!UBERON:0009773;1.54e-08;10!UBERON:0001231;1.54e-08;10!UBERON:0004810;1.54e-08;10!UBERON:0000020;2.86e-07;23!UBERON:0004807;4.93e-07;22!UBERON:0006555;5.67e-07;15!UBERON:0004819;5.67e-07;15!UBERON:0001285;5.67e-07;15!UBERON:0007684;5.67e-07;15!UBERON:0001737;6.40e-07;9!UBERON:0001557;6.40e-07;9!UBERON:0005911;7.48e-07;36!UBERON:0007625;8.41e-07;11!UBERON:0001032;9.31e-07;24!UBERON:0004456;9.31e-07;24|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.38e-16,160;UBERON:0000925,2.38e-16,160;UBERON:0006595,2.38e-16,160;UBERON:0001004,4.00e-16,74;UBERON:0005177,5.92e-16,101;UBERON:0001041,4.51e-15,87;UBERON:0001007,3.99e-14,145;UBERON:0001555,3.99e-14,145;UBERON:0007026,3.99e-14,145;UBERON:0004921,9.10e-14,118;UBERON:0000065,1.47e-12,54;UBERON:0000072,7.95e-12,47;UBERON:0008947,1.16e-11,38;UBERON:0003258,1.16e-11,38;UBERON:0005911,1.16e-09,82;UBERON:0009569,1.72e-09,112;UBERON:0001008,3.75e-09,48;UBERON:0006554,9.34e-09,47;UBERON:0004810,1.61e-08,10;UBERON:0001048,1.76e-08,160;UBERON:0000161,1.08e-07,36;UBERON:0006555,1.98e-07,16;UBERON:0004819,1.98e-07,16;UBERON:0002113,3.41e-07,26;UBERON:0003918,3.41e-07,26;UBERON:0011143,3.41e-07,26;UBERON:0005095,3.41e-07,26;UBERON:0007687,3.41e-07,26;UBERON:0002100,4.09e-07,199;UBERON:0001444,4.60e-07,49;UBERON:0000153,4.96e-07,62;UBERON:0007811,4.96e-07,62;UBERON:0004211,5.07e-07,15;UBERON:0009773,5.07e-07,15;UBERON:0001231,5.07e-07,15;UBERON:0001285,5.07e-07,15;UBERON:0007684,5.07e-07,15;UBERON:0004208,5.07e-07,15;UBERON:0001737,6.26e-07,9;UBERON:0000033,6.91e-07,56;UBERON:0005172,7.22e-07,54;UBERON:0005173,7.22e-07,54;UBERON:0007625,7.42e-07,11;UBERON:0000020,8.80e-07,24;UBERON:0001032,8.80e-07,24;UBERON:0004456,8.80e-07,24;UBERON:0000489,9.02e-07,31|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,110.82600536218,244.23040879035,0.655324116390517,0,0.123766352960047,0,0,0,0,0,0.492484232307152,0.408001382488506,1.56727360739044,1.71741592278634,5.74872585306114,0.87879847716362,0,0,0,0,0,0.154816123316076,3.67768489791571,1.50602959389125,8.13458822366933,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0.242584061187816,0,0.411167888021826,0.619412741790207,0,0.25616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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=144501 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27056 | |||
|TSSclassifier=S | |||
|UniProt=Q6KB66 | |||
|association_with_transcript=-7bp_to_ENST00000313234,ENST00000394815,NM_001081492,NM_182507,uc001rzx.2,uc001rzy.2_5end | |||
|description=CAGE_peak_1_at_KRT80_5end | |||
|id=chr12:52585791..52585806,- | |||
|ontology_enrichment_celltype=CL:0000066!7.95e-53!254;CL:0000076!5.98e-16!62;CL:0000223!3.30e-14!59;CL:0002076!1.75e-13!43;CL:0000077!6.11e-10!19;CL:0000220!3.92e-09!246;CL:0002321!5.76e-09!248 | |||
|ontology_enrichment_celltype_v019=CL:0000077;7.45e-12;19!CL:0002076;5.39e-10;42!CL:1000507;1.54e-08;10!CL:1000494;1.54e-08;10!CL:0000076;3.31e-08;63!CL:1000497;4.87e-08;17!CL:0002518;4.87e-08;17!CL:0002368;1.15e-07;13!CL:1000449;5.67e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.03e-56,253;CL:0000076,4.15e-17,63;CL:0000223,5.92e-15,58;CL:0002076,1.91e-14,42;CL:0000077,7.73e-12,19;CL:1000507,1.61e-08,10;CL:1000494,1.61e-08,10;CL:1000497,3.81e-08,17;CL:0002518,3.81e-08,17;CL:0002368,1.41e-07,13;CL:0002321,2.57e-07,250;CL:1000449,5.07e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.13e-09;29!UBERON:0006595;4.98e-08;86!CL:0000223;6.16e-08;58 | |||
|ontology_enrichment_disease=DOID:305!3.36e-31!106;DOID:0050687!5.62e-25!143;DOID:162!3.87e-17!235;DOID:14566!4.97e-16!239;DOID:299!2.44e-10!25;DOID:1749!2.44e-09!14;DOID:7!1.10e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:299;8.85e-14;25!DOID:1749;1.03e-11;14!DOID:305;1.44e-09;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.20e-37,106;DOID:0050687,6.55e-28,143;DOID:162,7.70e-22,235;DOID:14566,1.33e-20,239;DOID:299,9.08e-14,25;DOID:1749,9.87e-12,14;DOID:7,6.29e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.11e-20!169;UBERON:0000925!2.11e-20!169;UBERON:0006595!2.11e-20!169;UBERON:0001007!1.11e-17!155;UBERON:0001555!1.11e-17!155;UBERON:0007026!1.11e-17!155;UBERON:0001041!2.00e-17!98;UBERON:0000077!3.70e-17!130;UBERON:0004921!6.62e-17!129;UBERON:0004185!6.62e-17!129;UBERON:0000466!5.86e-16!126;UBERON:0001004!7.66e-16!72;UBERON:0000464!1.88e-13!104;UBERON:0005177!2.78e-13!107;UBERON:0001048!8.15e-13!168;UBERON:0005911!1.38e-12!82;UBERON:0000065!2.10e-12!53;UBERON:0003104!3.07e-11!238;UBERON:0009142!3.07e-11!238;UBERON:0000072!6.15e-11!46;UBERON:0008947!1.12e-10!38;UBERON:0003258!1.12e-10!38;UBERON:0009569!3.30e-10!113;UBERON:0000062!9.84e-09!511;UBERON:0000481!1.00e-08!347;UBERON:0000058!1.18e-08!26;UBERON:0002553!1.52e-08!70;UBERON:0001008!2.72e-08!45;UBERON:0000475!2.74e-08!365;UBERON:0006554!5.70e-08!44;UBERON:0000161!1.14e-07!35;UBERON:0003064!1.83e-07!37;UBERON:0002100!3.62e-07!216;UBERON:0005153!3.71e-07!37;UBERON:0000063!5.62e-07!97 | |||
|ontology_enrichment_uberon_v019=UBERON:0000072;2.41e-09;37!UBERON:0006554;4.56e-09;30!UBERON:0001008;4.56e-09;30!UBERON:0001004;8.14e-09;65!UBERON:0000065;9.29e-09;44!UBERON:0004211;1.54e-08;10!UBERON:0009773;1.54e-08;10!UBERON:0001231;1.54e-08;10!UBERON:0004810;1.54e-08;10!UBERON:0000020;2.86e-07;23!UBERON:0004807;4.93e-07;22!UBERON:0006555;5.67e-07;15!UBERON:0004819;5.67e-07;15!UBERON:0001285;5.67e-07;15!UBERON:0007684;5.67e-07;15!UBERON:0001737;6.40e-07;9!UBERON:0001557;6.40e-07;9!UBERON:0005911;7.48e-07;36!UBERON:0007625;8.41e-07;11!UBERON:0001032;9.31e-07;24!UBERON:0004456;9.31e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.38e-16,160;UBERON:0000925,2.38e-16,160;UBERON:0006595,2.38e-16,160;UBERON:0001004,4.00e-16,74;UBERON:0005177,5.92e-16,101;UBERON:0001041,4.51e-15,87;UBERON:0001007,3.99e-14,145;UBERON:0001555,3.99e-14,145;UBERON:0007026,3.99e-14,145;UBERON:0004921,9.10e-14,118;UBERON:0000065,1.47e-12,54;UBERON:0000072,7.95e-12,47;UBERON:0008947,1.16e-11,38;UBERON:0003258,1.16e-11,38;UBERON:0005911,1.16e-09,82;UBERON:0009569,1.72e-09,112;UBERON:0001008,3.75e-09,48;UBERON:0006554,9.34e-09,47;UBERON:0004810,1.61e-08,10;UBERON:0001048,1.76e-08,160;UBERON:0000161,1.08e-07,36;UBERON:0006555,1.98e-07,16;UBERON:0004819,1.98e-07,16;UBERON:0002113,3.41e-07,26;UBERON:0003918,3.41e-07,26;UBERON:0011143,3.41e-07,26;UBERON:0005095,3.41e-07,26;UBERON:0007687,3.41e-07,26;UBERON:0002100,4.09e-07,199;UBERON:0001444,4.60e-07,49;UBERON:0000153,4.96e-07,62;UBERON:0007811,4.96e-07,62;UBERON:0004211,5.07e-07,15;UBERON:0009773,5.07e-07,15;UBERON:0001231,5.07e-07,15;UBERON:0001285,5.07e-07,15;UBERON:0007684,5.07e-07,15;UBERON:0004208,5.07e-07,15;UBERON:0001737,6.26e-07,9;UBERON:0000033,6.91e-07,56;UBERON:0005172,7.22e-07,54;UBERON:0005173,7.22e-07,54;UBERON:0007625,7.42e-07,11;UBERON:0000020,8.80e-07,24;UBERON:0001032,8.80e-07,24;UBERON:0004456,8.80e-07,24;UBERON:0000489,9.02e-07,31 | |||
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| |||
|short_description=p1@KRT80 | |||
}} |
Revision as of 23:07, 10 September 2013
Short description: | p1@KRT80 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_KRT80_5end |
Coexpression cluster: | NA |
Association with transcript: | -7bp_to_ENST00000313234, ENST00000394815, NM_001081492, NM_182507, uc001rzx.2, uc001rzy.2_5end |
EntrezGene: | KRT80 |
HGNC: | 27056 |
UniProt: | Q6KB66 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.03e-56 | 253 |
squamous epithelial cell | 4.15e-17 | 63 |
endodermal cell | 5.92e-15 | 58 |
endo-epithelial cell | 1.91e-14 | 42 |
mesothelial cell | 7.73e-12 | 19 |
kidney tubule cell | 1.61e-08 | 10 |
nephron tubule epithelial cell | 1.61e-08 | 10 |
kidney cell | 3.81e-08 | 17 |
kidney epithelial cell | 3.81e-08 | 17 |
respiratory epithelial cell | 1.41e-07 | 13 |
embryonic cell | 2.57e-07 | 250 |
epithelial cell of nephron | 5.07e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.20e-37 | 106 |
cell type cancer | 6.55e-28 | 143 |
cancer | 7.70e-22 | 235 |
disease of cellular proliferation | 1.33e-20 | 239 |
adenocarcinoma | 9.08e-14 | 25 |
squamous cell carcinoma | 9.87e-12 | 14 |
disease of anatomical entity | 6.29e-07 | 39 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.