FFCP PHASE1:Hg19::chr12:69140414..69140468,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55508|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=20864|TSSclassifier=S|UniProt=|association_with_transcript=257bp_to_CU688882,HQ448512_5end|coexpression_cluster_id=C96|description=CAGE_peak_5_at_SLC35E3_5end|id=chr12:69140414..69140468,+|ontology_enrichment_celltype=CL:0000012!3.32e-09!682;CL:0000548!1.09e-08!679;CL:0000004!1.09e-08!679;CL:0000255!1.09e-08!679;CL:0000055!1.11e-08!180|ontology_enrichment_celltype_v019=CL:0000708;2.19e-07;3|ontology_enrichment_celltype_v019_2=CL:0000708,1.18e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:14566!7.43e-08!239;DOID:162!1.56e-07!235|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0003210;2.19e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0003210,1.18e-07,3|phase1_expression=0,0.214100523890983,0.422863212287913,1.0007329835313,0,0,0,0.631719873426831,0.261185628199839,0.245733936501509,1.39560233594486,0.218441372130172,0,0.123766352960047,0.331397375727916,0.672325146451775,0,0,0,0.984968464614303,0.408001382488506,0.313454721478088,1.43117993565528,1.23186982565596,0.251085279189606,0.152826811495903,0.246301768349837,0.236132343941038,0,0,0,0,0,0.369754010166788,4.5705648342378,3.2698923472107,0.880801318004542,0,0,0,0.223915474239924,0,0,0.145398238779565,0.755751887377619,0.242584061187816,0.464858073811369,0.411167888021826,0,0,0,0,0,0,0,0,0.272906150057846,1.12361742222542,0.306083892370903,0,0,0.329851300186716,0,0,0,0.56738522469114,0.622822248995575,0.251248665256743,0.521482918420201,0.217188844705117,0,0.368277635987565,0,0,0.212604299965044,0,0.112328631146495,0,0,0.285012743741249,0.59675003159727,0,0,0,0,0,0.800791974072025,1.14950487990897,0,0,0,0,0.382273228125229,0,1.12101712596307,2.37045676297569,0,0,0.205601498999509,0,0.32592226663359,0,0,0.111410456885174,0.883817722424512,0.221533894583621,0.812411591295047,0.512365278902701,0.520237390239513,0,0,0,0,0,0,0.113309342697566,0,0,0.253019692019503,0,0.651083453856419,0,0.301150238155546,0,0,0.236777252044017,0.821127996921047,0,0,0,2.43806866313962,0.670700859703636,0.12786256184353,0.722878304769133,0.50133791063589,0.144846518960824,0,0.486634870302636,0.850813354476611,0.443458794925128,0.43917392846563,0.0654895377488563,0,0.741568885568859,0.324547393654683,0.696518949197069,0.26591592103773,0,0,0,0.79504962946682,0,0.347140501607594,0,0,0,0.208994966536811,0,1.06729878806013,0,0.402829317109147,0,0,1.47065232138347,0.81014194788176,0.982297011124877,0.44905874525234,0.450445921933289,0,0.949265659568129,0.366403487860815,0,0,0,0,0.506522046658319,0,0.573673241497627,0,0,0,0,0,0.134710672069688,0.326923806226917,0.302714855289863,0,0,0.624320153660641,0.570471821544449,0.448346041655403,1.52664848236894,1.45685649931318,1.12360645361799,0.408308342509787,1.71968044236475,0.723280468230358,1.18800285728205,0.494533858557114,2.73048408581408,0,2.35670559535693,1.62654075833553,2.21651292387346,0,0.30648779579902,0.751190294532984,1.02088964844019,0.538168907066586,0.213557388818567,0.211931901159562,1.20036438433761,0.412210116953756,0,0.18611685633159,1.18143432568886,0.389748020644795,0.757301322732344,0.0920498986422993,0.161646056818812,0,0.705264687593482,0.339121184620975,0.193260853163297,0,0.286804595389004,1.58565817968474,0.530119073285941,0.348581828608555,0.725627385107593,1.7662459561294,0,0,0,0,0.928735856063958,0.721879481669586,0.591534000199219,0.505754070234305,0.723033089650446,0.330881918197182,0.653638332277218,0.237270619111097,0.674156540800822,1.37355025587742,1.15424147083917,0.738155454624648,0,0,0,1.26755034821831,0.982827216677626,0,0.441463099414651,0.491953754172454,0.343135620597051,0.109750285408626,0,0.502644862058154,0.0925884451585296,0,0,0,0.695582429850461,0.352226082707465,0.866198686566443,0.462985512576611,0.380508304469197,0,0,0,0.468008530278475,0,0,0,0.283550194484773,0.268675568108545,1.45316969256981,0.766765358330422,0.492663237895943,0.352193736052904,0,0,0,0.698476837213859,0.763976851116555,0,0,0.514137463516618,2.10240140490742,0,2.24262168690721,1.30788020649984,1.9067954313447,0.258543431515556,0,0.845302752556,0.26593811658487,0,0.514414748524284,1.41849132023278,0.266422179016099,0.285955987316295,0.542621605391443,0,0.977208552881205,0,0,0,0,0.099972991182057,0,0.502257091432126,2.10833939483032,0,0,1.42636905040718,0.434343920002738,0.410952645100767,0.716243852959582,0.336255431980582,0.591092280605782,0,0,0.76228387266739,0,0,0.670065061337395,0,0,0,0,0.36807447515742,0.500170521059677,0.271265023699736,0.415941723061614,0.178428988797162,0.157702415033935,0,0.902838299183157,0,0,0,0.184369168541703,0.955719759148911,0.195801157462741,0.343143423810856,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0.128139149255701,0,0,0,0.462629081407967,0,1.23190734020714,0.519254429183621,0.929683027679674,0.241718899183244,0.200506470303285,0,0.918515585316854,0.72836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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55508 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=20864 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=257bp_to_CU688882,HQ448512_5end | |||
|coexpression_cluster_id=C96 | |||
|description=CAGE_peak_5_at_SLC35E3_5end | |||
|id=chr12:69140414..69140468,+ | |||
|ontology_enrichment_celltype=CL:0000012!3.32e-09!682;CL:0000548!1.09e-08!679;CL:0000004!1.09e-08!679;CL:0000255!1.09e-08!679;CL:0000055!1.11e-08!180 | |||
|ontology_enrichment_celltype_v019=CL:0000708;2.19e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000708,1.18e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!7.43e-08!239;DOID:162!1.56e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003210;2.19e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003210,1.18e-07,3 | |||
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| |||
|short_description=p5@SLC35E3 | |||
}} |
Revision as of 00:08, 11 September 2013
Short description: | p5@SLC35E3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_SLC35E3_5end |
Coexpression cluster: | C96_non_acute_tonsil_spleen_Burkitt_lymphoma_appendix |
Association with transcript: | 257bp_to_CU688882, HQ448512_5end |
EntrezGene: | SLC35E3 |
HGNC: | 20864 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leptomeningeal cell | 1.18e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood-cerebrospinal fluid barrier | 1.18e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.