FFCP PHASE1:Hg19::chr13:25691769..25691814,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:25691769..25691814,+|id=chr13:25691769..25691814,+|ontology_enrichment_celltype=CL:0000349!1.62e-12!3;CL:0002577!1.62e-12!3;CL:0002178!1.71e-12!3;CL:0000313!8.91e-10!1;CL:0000066!1.36e-07!254|ontology_enrichment_celltype_v019=CL:0002577;1.91e-44;3!CL:1000415;9.87e-18;2!CL:0002178;1.85e-12;3!CL:0000349;6.36e-08;19|ontology_enrichment_celltype_v019_2=CL:0002577,1.91e-44,3;CL:1000415,9.07e-18,2;CL:0002178,1.85e-12,3;CL:0000349,6.36e-08,19|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:299!9.21e-21!25;DOID:5093!4.69e-20!4;DOID:1612!4.69e-20!4;DOID:2152!8.91e-10!1;DOID:0050619!1.62e-09!1;DOID:1357!1.62e-09!1;DOID:305!2.11e-09!106|ontology_enrichment_disease_v019=DOID:5093;7.69e-34;4!DOID:1612;7.69e-34;4!DOID:3493;5.48e-18;2!DOID:299;1.07e-12;25|ontology_enrichment_disease_v019_2=DOID:5093,8.36e-34,4;DOID:1612,8.36e-34,4;DOID:3493,5.48e-18,2;DOID:299,1.09e-12,25|ontology_enrichment_uberon=UBERON:0001987!1.57e-19!4;UBERON:0004340!1.57e-19!4;UBERON:0003124!3.12e-19!7;UBERON:0005631!9.68e-15!14;UBERON:0000158!9.68e-15!14;UBERON:0004911!8.91e-10!1;UBERON:0001301!1.36e-09!1;UBERON:0003112!1.48e-09!1;UBERON:0000032!1.48e-09!1;UBERON:0005253!1.48e-09!1;UBERON:0003128!1.48e-09!1;UBERON:0002241!1.48e-09!1;UBERON:0001703!1.48e-09!1;UBERON:0004761!1.48e-09!1;UBERON:0009617!1.48e-09!1;UBERON:0001764!1.62e-09!1;UBERON:0001825!1.62e-09!1;UBERON:0000478!1.55e-08!24;UBERON:0000310!2.45e-08!10;UBERON:0004175!3.20e-08!25;UBERON:0003133!9.81e-08!48;UBERON:0001443!1.28e-07!11|ontology_enrichment_uberon_v019=UBERON:0001987;1.17e-33;4!UBERON:0000310;3.14e-14;10!UBERON:0001443;4.95e-13;11!UBERON:0002110;2.74e-12;3!UBERON:0000945;5.35e-08;5!UBERON:0010039;5.35e-08;5|ontology_enrichment_uberon_v019_2=UBERON:0001987,1.17e-33,4;UBERON:0004340,1.17e-33,4;UBERON:0003124,9.49e-20,7;UBERON:0000310,3.25e-14,10;UBERON:0001443,5.10e-13,11;UBERON:0002110,2.59e-12,3;UBERON:0006242,2.59e-12,3;UBERON:0005631,2.08e-10,14;UBERON:0000158,2.08e-10,14;UBERON:0000995,2.95e-07,21;UBERON:0005795,5.74e-07,22;UBERON:0003975,5.74e-07,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,2.57545848628462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.99306318531491,1.81434175997808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,5.20855522170466,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,2.93327074102205,0,0,0.599428828746391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.335566295393377,7.45941775475847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr13:25691769..25691814,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:25691769..25691814,+ | |||
|id=chr13:25691769..25691814,+ | |||
|ontology_enrichment_celltype=CL:0000349!1.62e-12!3;CL:0002577!1.62e-12!3;CL:0002178!1.71e-12!3;CL:0000313!8.91e-10!1;CL:0000066!1.36e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002577;1.91e-44;3!CL:1000415;9.87e-18;2!CL:0002178;1.85e-12;3!CL:0000349;6.36e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,1.91e-44,3;CL:1000415,9.07e-18,2;CL:0002178,1.85e-12,3;CL:0000349,6.36e-08,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:299!9.21e-21!25;DOID:5093!4.69e-20!4;DOID:1612!4.69e-20!4;DOID:2152!8.91e-10!1;DOID:0050619!1.62e-09!1;DOID:1357!1.62e-09!1;DOID:305!2.11e-09!106 | |||
|ontology_enrichment_disease_v019=DOID:5093;7.69e-34;4!DOID:1612;7.69e-34;4!DOID:3493;5.48e-18;2!DOID:299;1.07e-12;25 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,8.36e-34,4;DOID:1612,8.36e-34,4;DOID:3493,5.48e-18,2;DOID:299,1.09e-12,25 | |||
|ontology_enrichment_uberon=UBERON:0001987!1.57e-19!4;UBERON:0004340!1.57e-19!4;UBERON:0003124!3.12e-19!7;UBERON:0005631!9.68e-15!14;UBERON:0000158!9.68e-15!14;UBERON:0004911!8.91e-10!1;UBERON:0001301!1.36e-09!1;UBERON:0003112!1.48e-09!1;UBERON:0000032!1.48e-09!1;UBERON:0005253!1.48e-09!1;UBERON:0003128!1.48e-09!1;UBERON:0002241!1.48e-09!1;UBERON:0001703!1.48e-09!1;UBERON:0004761!1.48e-09!1;UBERON:0009617!1.48e-09!1;UBERON:0001764!1.62e-09!1;UBERON:0001825!1.62e-09!1;UBERON:0000478!1.55e-08!24;UBERON:0000310!2.45e-08!10;UBERON:0004175!3.20e-08!25;UBERON:0003133!9.81e-08!48;UBERON:0001443!1.28e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;1.17e-33;4!UBERON:0000310;3.14e-14;10!UBERON:0001443;4.95e-13;11!UBERON:0002110;2.74e-12;3!UBERON:0000945;5.35e-08;5!UBERON:0010039;5.35e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,1.17e-33,4;UBERON:0004340,1.17e-33,4;UBERON:0003124,9.49e-20,7;UBERON:0000310,3.25e-14,10;UBERON:0001443,5.10e-13,11;UBERON:0002110,2.59e-12,3;UBERON:0006242,2.59e-12,3;UBERON:0005631,2.08e-10,14;UBERON:0000158,2.08e-10,14;UBERON:0000995,2.95e-07,21;UBERON:0005795,5.74e-07,22;UBERON:0003975,5.74e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,2.57545848628462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.99306318531491,1.81434175997808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,5.20855522170466,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,2.93327074102205,0,0,0.599428828746391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.335566295393377,7.45941775475847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:25691769..25691814,+ | |||
}} |
Revision as of 01:49, 11 September 2013
Short description: | p@chr13:25691769..25691814, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:25691769..25691814, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 1.91e-44 | 3 |
epithelial cell of gall bladder | 9.07e-18 | 2 |
epithelial cell of stomach | 1.85e-12 | 3 |
extraembryonic cell | 6.36e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
placenta | 1.17e-33 | 4 |
allantois | 1.17e-33 | 4 |
chorion | 9.49e-20 | 7 |
breast | 3.25e-14 | 10 |
chest | 5.10e-13 | 11 |
gallbladder | 2.59e-12 | 3 |
gall bladder primordium | 2.59e-12 | 3 |
extraembryonic membrane | 2.08e-10 | 14 |
membranous layer | 2.08e-10 | 14 |
uterus | 2.95e-07 | 21 |
embryonic uterus | 5.74e-07 | 22 |
internal female genitalia | 5.74e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 8.36e-34 | 4 |
breast cancer | 8.36e-34 | 4 |
signet ring cell adenocarcinoma | 5.48e-18 | 2 |
adenocarcinoma | 1.09e-12 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.