FFCP PHASE1:Hg19::chr13:31729140..31729163,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C366|description=CAGE_peak_at_chr13:31729140..31729163,-|id=chr13:31729140..31729163,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000097;1.85e-09;5|ontology_enrichment_celltype_v019_2=CL:0000097,1.41e-09,5;CL:0002028,1.41e-09,5|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.44e-11!115;UBERON:0001049!5.53e-08!57;UBERON:0005068!5.53e-08!57;UBERON:0006241!5.53e-08!57;UBERON:0007135!5.53e-08!57|ontology_enrichment_uberon_v019=UBERON:0002133;1.55e-11;2!UBERON:0003978;5.88e-08;3!UBERON:0000946;5.88e-08;3!UBERON:0006947;2.05e-07;3!UBERON:0004054;2.05e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0002133,1.56e-11,2;UBERON:0003978,5.90e-08,3;UBERON:0009751,5.90e-08,3;UBERON:0000946,5.90e-08,3;UBERON:0002523,5.90e-08,3;UBERON:0005983,5.90e-08,3;UBERON:0002165,5.90e-08,3;UBERON:0002062,5.90e-08,3;UBERON:0007280,5.90e-08,3;UBERON:0007023,2.16e-07,114;UBERON:0006947,2.41e-07,3;UBERON:0004054,2.41e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0,0,0,0,0,0,0,0.309868802321207,0,0,0,0.200544447470142,0,0.223915474239924,0,0,0,0,0.242584061187816,1.16214518452842,0,1.23882548358041,0.863077176966451,0.256160706529101,0.236482229888585,0.689491361473237,0.645484683583826,0,0.188242339542605,0.272906150057846,0,0.306083892370903,0,0.639337125799041,0,0.797854630486527,0,0.290209238628584,0.56738522469114,0.622822248995575,1.7587406567972,1.0429658368404,1.52032191293582,0.605399502633369,0,0.316462387440884,0,0,0,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0.393419540227666,0.393010762749165,1.64481199199607,0,0,0,0,0,0.589211814949674,0,0.270803863765016,0,0.130059347559878,0,0.276350017785848,0,0.296573126324121,0,0,0,0,0.68725489096526,0,0,0,0,0,0,0,0,0,0.80642697289893,0.802320587350522,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0.236613600079688,0,0,0,0,0,0.539325232640658,0.392442930250692,0.769494313892781,0,0,0,0,1.26755034821831,0,3.54473944008842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0.790204397959275,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,1.86595303986695,2.16179930125442,3.40854570251226,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0.560425719967636,0.197030760201927,0.862510299438069,0.513372145118994,0.254094624222463,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.01859945426117,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0.143124886741991,0.744316738719335,0,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,4.33061483573184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0.213425530045242,0.318852545457645,0.399158742865633,0,0.211673582723883,0,0,0,0.156679895773023,0,0,0.1605880751037,0,1.27753871307098,1.03051603426729,0.614481528616916,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0.921482106297696,0.994147647766298,0.844016498463076,0.111308705022906,0,2.74463030566391,2.59022384726391,0.276283915531148,0,0.20453736500431,0.615424027305347,0,0.0898683511473268,0,0,0.394573622547734,0,0,0,0,0,0,0.174919999992391,4.34999745260876,0,0,0,0,0,0,0,0.723578631752448,0,0.221158519862449,0,0,0,0.278847488557207,0,0,0.23056390438806,0,0.108647371922008,0.638002319463839,0.366390373607449,0,0,0,0,0.225595660617181,0,0,0,0,0.632994193584081,0,0,0,1.99052386215701,0.265372693510018,0,0,0.123563938946503,0,0.337005664903385,1.60515529459758,0,0.182454789215666,0,0.485560759068186,1.18375320854817,0,0,0,0.300646838828985,0,1.32930774541437,0,0.313932918407225,0,0,0,0,0.195984794828755,0.261177619741208,0.17472666824203,0,0,0,0,0.290967049465258,0,0,0.137041924646751,0.19871461170299,0.126621591911757,0,0,0,0,0.144090417154106,0.229073192331831,0.514784993585894,0.432164393964449,0.621262677827163,0,0,0.104602846312333,0.407992870545287,0,0.600420288709789,0.410716136675979,0,0,0.262887354279314,5.02708322290058,0,14.3574604915363,0,0,0,0.134366944973453,0,4.65983798109815,0.0787831823072236,0.0824158583811665,0,0.0984274815147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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C366 | |||
|description=CAGE_peak_at_chr13:31729140..31729163,- | |||
|id=chr13:31729140..31729163,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.85e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.41e-09,5;CL:0002028,1.41e-09,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.44e-11!115;UBERON:0001049!5.53e-08!57;UBERON:0005068!5.53e-08!57;UBERON:0006241!5.53e-08!57;UBERON:0007135!5.53e-08!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0002133;1.55e-11;2!UBERON:0003978;5.88e-08;3!UBERON:0000946;5.88e-08;3!UBERON:0006947;2.05e-07;3!UBERON:0004054;2.05e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002133,1.56e-11,2;UBERON:0003978,5.90e-08,3;UBERON:0009751,5.90e-08,3;UBERON:0000946,5.90e-08,3;UBERON:0002523,5.90e-08,3;UBERON:0005983,5.90e-08,3;UBERON:0002165,5.90e-08,3;UBERON:0002062,5.90e-08,3;UBERON:0007280,5.90e-08,3;UBERON:0007023,2.16e-07,114;UBERON:0006947,2.41e-07,3;UBERON:0004054,2.41e-07,3 | |||
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| |||
|short_description=p@chr13:31729140..31729163,- | |||
}} |
Revision as of 02:01, 11 September 2013
Short description: | p@chr13:31729140..31729163, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:31729140..31729163, - |
Coexpression cluster: | C366_heart_vagina_adipose_diaphragm_left_aorta_breast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.41e-09 | 5 |
basophil mast progenitor cell | 1.41e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
atrioventricular valve | 1.56e-11 | 2 |
valve | 5.90e-08 | 3 |
cardiac mesenchyme | 5.90e-08 | 3 |
cardial valve | 5.90e-08 | 3 |
tunica intima | 5.90e-08 | 3 |
heart layer | 5.90e-08 | 3 |
endocardium | 5.90e-08 | 3 |
endocardial cushion | 5.90e-08 | 3 |
presumptive endocardium | 5.90e-08 | 3 |
adult organism | 2.16e-07 | 114 |
male genital duct | 2.41e-07 | 3 |
internal male genitalia | 2.41e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.