FFCP PHASE1:Hg19::chr14:105420260..105420274,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=113146|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20125|TSSclassifier=N|UniProt=|association_with_transcript=-19bp_to_ENST00000557457_5end|coexpression_cluster_id=C903|description=CAGE_peak_3_at_AHNAK2_5end|id=chr14:105420260..105420274,-|ontology_enrichment_celltype=CL:0000066!7.44e-23!254;CL:0000220!2.54e-13!246;CL:0002321!5.08e-13!248;CL:0000076!1.07e-12!62;CL:0002076!8.00e-10!43;CL:0000057!1.39e-08!75;CL:0000223!4.67e-07!59;CL:0000077!6.03e-07!19|ontology_enrichment_celltype_v019=CL:0002076;6.92e-07;42|ontology_enrichment_celltype_v019_2=CL:0000066,8.01e-20,253;CL:0000076,3.72e-12,63;CL:0002321,8.49e-11,250;CL:0002076,5.14e-09,42;CL:0000057,3.60e-07,76|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!5.88e-16!659;UBERON:0000467!5.81e-15!625;UBERON:0000480!1.09e-14!626;UBERON:0000475!1.19e-14!365;UBERON:0000062!8.22e-13!511;UBERON:0003102!1.30e-12!95;UBERON:0000922!3.41e-10!612;UBERON:0002050!4.02e-10!605;UBERON:0005423!4.02e-10!605;UBERON:0000481!5.64e-10!347;UBERON:0000923!6.53e-10!604;UBERON:0005291!6.53e-10!604;UBERON:0006598!6.53e-10!604;UBERON:0002532!6.53e-10!604;UBERON:0000064!6.81e-10!219;UBERON:0004121!2.72e-09!169;UBERON:0000119!1.19e-08!312;UBERON:0000924!1.40e-08!173;UBERON:0006601!1.40e-08!173;UBERON:0000483!1.63e-08!309;UBERON:0000033!3.09e-08!123;UBERON:0001444!8.00e-08!48;UBERON:0000153!4.17e-07!129;UBERON:0007811!4.17e-07!129;UBERON:0005156!9.39e-07!59;UBERON:0000990!9.39e-07!59;UBERON:0004119!9.54e-07!169;UBERON:0000925!9.54e-07!169;UBERON:0006595!9.54e-07!169|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.11e-12,99;UBERON:0001444,1.31e-07,49;UBERON:0000033,1.72e-07,56;UBERON:0002199,3.20e-07,46;UBERON:0002416,3.20e-07,46;UBERON:0002097,3.54e-07,41;UBERON:0004121,3.87e-07,171;UBERON:0000924,3.87e-07,171;UBERON:0006601,3.87e-07,171|phase1_expression=0.726713517082227,4.71021152560163,0.422863212287913,7.00513088471913,2.23480547213644,3.48935409640147,2.53299878168311,1.89515962028049,2.08948502559871,0.982935746006035,2.09340350391728,8.30077214094655,12.3970479767373,11.3865044723243,16.2384714106679,3.36162573225888,8.43772339233568,8.76372108464848,8.78279037822912,2.58554221961255,6.12002073732759,5.32873026512749,0.85870796139317,7.93871665422728,2.13422487311165,0,0,0,0,0,0.309632246632152,1.83884244895785,4.2168828628955,6.65557218300218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0.383587685530591,4.69870898099936,0.50133791063589,9.55987025141436,0,1.45990461090791,4.53767122387526,7.76052891118974,10.2766699260957,2.68507104770311,15.6646973965793,18.9100065820059,0,0.174129737299267,0.398873881556595,0,0,0,1.78886166630035,4.30117297553062,6.59566953054429,2.82653970962005,6.71199097935849,8.25354125820202,1.46296476575767,1.29208379584664,1.42306505074684,0.33472061276467,0.805658634218294,0,2.92874469057803,2.94130464276695,8.1014194788176,0.892997282840798,0.898117490504679,1.35133776579987,3.06633274931766,0,2.93122790288652,0,0,33.5792420149751,2.98183171017191,4.17880688493113,10.3279161034311,31.8388649031183,10.2853830837524,3.36406560085384,0,8.88003174301776,0,0.538842688278752,0.163461903113459,0.151357427644931,1.15235184896,0.234321431833797,6.55536161343673,2.2818872861778,14.9448680551801,1.52664848236894,1.29498355494505,1.40450806702248,2.44985005505872,10.1952483368767,5.57959218349133,0,2.47266929278557,0.910161361938026,2.15585442544872,2.69337782326506,4.62938523526267,2.49357703935765,3.07284334616587,1.22595118319608,0.600952235626387,0.567160915800105,20.6298081042191,3.63047560991565,2.7551147150743,14.1042815159669,4.74041634496819,13.3973080823727,3.53622027030021,10.801685263441,3.60516919096435,10.8546522924969,0.920498986422993,2.7479829659198,15.2654124782144,2.92181084860157,4.91725717700414,5.7978255948989,6.2731607735892,4.01526433544605,0.365921118388786,0.132529768321485,0.929551542956147,1.45125477021519,0.504641701751257,0.36497735907583,1.56449532329816,11.5783368874719,0,7.42988684851167,12.271951188383,2.83936320095625,2.69735504124963,3.13314338848527,2.42646740011267,2.17879444092406,4.03360052488864,2.56179485504312,3.53198637225623,1.53898862778556,0,0,2.8810180793198,1.47008711385542,8.87285243752816,0.982827216677626,1.77236972004421,0,0.122988438543114,13.8969926341806,21.401305654682,2.24803506515239,46.1427983369386,17.7769814704377,1.62904152655162,7.27954349695705,7.21656710126366,7.9991979432803,2.11335649624479,0.433099343283221,0.925971025153221,3.23432058798817,0.790204397959275,0.858486162094873,0.246217006087397,0.936017060556951,0.743155811443641,0.93733833986777,28.5569617938061,9.215381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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=113146 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20125 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-19bp_to_ENST00000557457_5end | |||
|coexpression_cluster_id=C903 | |||
|description=CAGE_peak_3_at_AHNAK2_5end | |||
|id=chr14:105420260..105420274,- | |||
|ontology_enrichment_celltype=CL:0000066!7.44e-23!254;CL:0000220!2.54e-13!246;CL:0002321!5.08e-13!248;CL:0000076!1.07e-12!62;CL:0002076!8.00e-10!43;CL:0000057!1.39e-08!75;CL:0000223!4.67e-07!59;CL:0000077!6.03e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0002076;6.92e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.01e-20,253;CL:0000076,3.72e-12,63;CL:0002321,8.49e-11,250;CL:0002076,5.14e-09,42;CL:0000057,3.60e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!5.88e-16!659;UBERON:0000467!5.81e-15!625;UBERON:0000480!1.09e-14!626;UBERON:0000475!1.19e-14!365;UBERON:0000062!8.22e-13!511;UBERON:0003102!1.30e-12!95;UBERON:0000922!3.41e-10!612;UBERON:0002050!4.02e-10!605;UBERON:0005423!4.02e-10!605;UBERON:0000481!5.64e-10!347;UBERON:0000923!6.53e-10!604;UBERON:0005291!6.53e-10!604;UBERON:0006598!6.53e-10!604;UBERON:0002532!6.53e-10!604;UBERON:0000064!6.81e-10!219;UBERON:0004121!2.72e-09!169;UBERON:0000119!1.19e-08!312;UBERON:0000924!1.40e-08!173;UBERON:0006601!1.40e-08!173;UBERON:0000483!1.63e-08!309;UBERON:0000033!3.09e-08!123;UBERON:0001444!8.00e-08!48;UBERON:0000153!4.17e-07!129;UBERON:0007811!4.17e-07!129;UBERON:0005156!9.39e-07!59;UBERON:0000990!9.39e-07!59;UBERON:0004119!9.54e-07!169;UBERON:0000925!9.54e-07!169;UBERON:0006595!9.54e-07!169 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.11e-12,99;UBERON:0001444,1.31e-07,49;UBERON:0000033,1.72e-07,56;UBERON:0002199,3.20e-07,46;UBERON:0002416,3.20e-07,46;UBERON:0002097,3.54e-07,41;UBERON:0004121,3.87e-07,171;UBERON:0000924,3.87e-07,171;UBERON:0006601,3.87e-07,171 | |||
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| |||
|short_description=p3@AHNAK2 | |||
}} |
Revision as of 03:29, 11 September 2013
Short description: | p3@AHNAK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_AHNAK2_5end |
Coexpression cluster: | C903_amniotic_salivary_Prostate_endometrial_epithelioid_gastric_Keratinocyte |
Association with transcript: | -19bp_to_ENST00000557457_5end |
EntrezGene: | AHNAK2 |
HGNC: | 20125 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.01e-20 | 253 |
squamous epithelial cell | 3.72e-12 | 63 |
embryonic cell | 8.49e-11 | 250 |
endo-epithelial cell | 5.14e-09 | 42 |
fibroblast | 3.60e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
surface structure | 1.11e-12 | 99 |
subdivision of head | 1.31e-07 | 49 |
head | 1.72e-07 | 56 |
integument | 3.20e-07 | 46 |
integumental system | 3.20e-07 | 46 |
skin of body | 3.54e-07 | 41 |
ectoderm-derived structure | 3.87e-07 | 171 |
ectoderm | 3.87e-07 | 171 |
presumptive ectoderm | 3.87e-07 | 171 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.