FFCP PHASE1:Hg19::chr14:36983073..36983089,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=253970|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18387|TSSclassifier=S|UniProt=|association_with_transcript=-39bp_to_ENST00000518529_5end|coexpression_cluster_id=C95|description=CAGE_peak_4_at_SFTA3_5end|id=chr14:36983073..36983089,-|ontology_enrichment_celltype=CL:0002553!1.19e-10!1;CL:0000082!6.31e-08!19|ontology_enrichment_celltype_v019=CL:0002553;1.07e-14;1!CL:0000082;2.34e-11;19|ontology_enrichment_celltype_v019_2=CL:0002553,1.07e-14,1;CL:0000082,2.25e-11,19|ontology_enrichment_development_v019=UBERON:0007123;1.25e-24;5!UBERON:0008947;6.20e-22;29!UBERON:0001041;3.45e-21;30|ontology_enrichment_disease=DOID:3112!3.61e-10!1;DOID:1324!5.33e-10!15;DOID:3905!1.05e-09!9;DOID:0050615!2.19e-09!16;DOID:3908!2.73e-08!5|ontology_enrichment_disease_v019=DOID:1324;2.62e-14;15!DOID:3905;1.07e-13;9!DOID:0050615;1.97e-13;16!DOID:3908;1.95e-11;5!DOID:1325;1.99e-08;7!DOID:3904;1.99e-08;7!DOID:3910;7.27e-08;2|ontology_enrichment_disease_v019_2=DOID:1324,2.49e-14,15;DOID:3905,1.00e-13,9;DOID:0050615,1.87e-13,16;DOID:3908,1.58e-11,5;DOID:1325,2.15e-08,7;DOID:3904,2.15e-08,7;DOID:3910,7.03e-08,2|ontology_enrichment_uberon=UBERON:0002046!1.24e-29!5;UBERON:0004117!1.24e-29!5;UBERON:0007689!1.24e-29!5;UBERON:0007123!1.24e-29!5;UBERON:0003091!1.24e-29!5;UBERON:0005383!6.08e-27!3;UBERON:0005382!6.08e-27!3;UBERON:0000369!2.20e-20!4;UBERON:0002435!2.20e-20!4;UBERON:0000204!2.20e-20!4;UBERON:0010082!2.20e-20!4;UBERON:0009663!2.67e-20!7;UBERON:0002048!6.41e-20!22;UBERON:0000117!6.41e-20!22;UBERON:0000171!6.41e-20!22;UBERON:0000170!6.41e-20!22;UBERON:0005597!6.41e-20!22;UBERON:0000118!6.41e-20!22;UBERON:0000341!2.61e-19!2;UBERON:0001873!1.35e-18!2;UBERON:0010122!1.35e-18!2;UBERON:0002308!7.42e-16!9;UBERON:0002420!7.42e-16!9;UBERON:0000125!7.42e-16!9;UBERON:0007245!7.42e-16!9;UBERON:0010009!7.42e-16!9;UBERON:0010011!7.42e-16!9;UBERON:0000454!7.42e-16!9;UBERON:0005153!6.17e-15!37;UBERON:0005911!3.39e-14!82;UBERON:0009722!1.27e-13!11;UBERON:0007690!1.27e-13!11;UBERON:0005178!1.22e-12!34;UBERON:0002224!1.22e-12!34;UBERON:0005181!2.95e-12!35;UBERON:0008947!3.13e-11!38;UBERON:0003258!3.13e-11!38;UBERON:0002171!6.73e-11!1;UBERON:0006518!6.73e-11!1;UBERON:0008949!6.73e-11!1;UBERON:0000101!6.73e-11!1;UBERON:0002167!6.73e-11!1;UBERON:0005157!1.47e-10!51;UBERON:0001874!3.96e-10!1;UBERON:0008814!4.85e-10!15;UBERON:0000915!5.29e-08!52;UBERON:0004802!6.31e-08!19;UBERON:0000115!6.31e-08!19;UBERON:0000065!7.74e-08!53|ontology_enrichment_uberon_v019=UBERON:0002048;4.82e-29;22!UBERON:0000117;4.82e-29;22!UBERON:0000171;4.82e-29;22!UBERON:0000170;4.82e-29;22!UBERON:0000341;1.71e-27;2!UBERON:0002046;1.25e-24;5!UBERON:0005178;5.80e-16;34!UBERON:0002224;5.80e-16;34!UBERON:0002171;4.72e-15;1!UBERON:0006518;4.72e-15;1!UBERON:0008949;4.72e-15;1!UBERON:0000101;4.72e-15;1!UBERON:0002167;4.72e-15;1!UBERON:0005181;1.77e-14;35!UBERON:0004802;2.34e-11;19!UBERON:0000115;2.34e-11;19!UBERON:0000065;8.75e-11;44!UBERON:0004807;7.64e-10;22!UBERON:0000974;7.93e-10;6!UBERON:0000915;7.05e-08;52!UBERON:0004903;7.27e-08;2!UBERON:0002173;7.27e-08;2!UBERON:0002186;7.27e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0002048,4.53e-29,22;UBERON:0000117,4.53e-29,22;UBERON:0000171,4.53e-29,22;UBERON:0000170,4.53e-29,22;UBERON:0005597,4.53e-29,22;UBERON:0000118,4.53e-29,22;UBERON:0000341,3.13e-27,2;UBERON:0002046,1.02e-24,5;UBERON:0004117,1.02e-24,5;UBERON:0007689,1.02e-24,5;UBERON:0007123,1.02e-24,5;UBERON:0003091,1.02e-24,5;UBERON:0005178,1.17e-18,34;UBERON:0002224,1.17e-18,34;UBERON:0005181,4.10e-18,35;UBERON:0005153,4.15e-17,37;UBERON:0008947,1.20e-16,38;UBERON:0003258,1.20e-16,38;UBERON:0005911,3.72e-15,82;UBERON:0002171,4.73e-15,1;UBERON:0006518,4.73e-15,1;UBERON:0008949,4.73e-15,1;UBERON:0000101,4.73e-15,1;UBERON:0002167,4.73e-15,1;UBERON:0005157,2.31e-13,47;UBERON:0000915,5.02e-12,52;UBERON:0009722,1.37e-11,11;UBERON:0007690,1.37e-11,11;UBERON:0000065,1.47e-11,54;UBERON:0004802,2.25e-11,19;UBERON:0000115,2.25e-11,19;UBERON:0001004,2.78e-08,74;UBERON:0001007,5.32e-08,145;UBERON:0001555,5.32e-08,145;UBERON:0007026,5.32e-08,145;UBERON:0004903,7.03e-08,2;UBERON:0002173,7.03e-08,2;UBERON:0002186,7.03e-08,2;UBERON:0004807,8.58e-08,28;UBERON:0008814,2.73e-07,18;UBERON:0001048,3.42e-07,160;UBERON:0004119,3.86e-07,160;UBERON:0000925,3.86e-07,160;UBERON:0006595,3.86e-07,160;UBERON:0001041,5.92e-07,87|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37528029272598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=253970 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18387 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-39bp_to_ENST00000518529_5end | |||
|coexpression_cluster_id=C95 | |||
|description=CAGE_peak_4_at_SFTA3_5end | |||
|id=chr14:36983073..36983089,- | |||
|ontology_enrichment_celltype=CL:0002553!1.19e-10!1;CL:0000082!6.31e-08!19 | |||
|ontology_enrichment_celltype_v019=CL:0002553;1.07e-14;1!CL:0000082;2.34e-11;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.07e-14,1;CL:0000082,2.25e-11,19 | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.25e-24;5!UBERON:0008947;6.20e-22;29!UBERON:0001041;3.45e-21;30 | |||
|ontology_enrichment_disease=DOID:3112!3.61e-10!1;DOID:1324!5.33e-10!15;DOID:3905!1.05e-09!9;DOID:0050615!2.19e-09!16;DOID:3908!2.73e-08!5 | |||
|ontology_enrichment_disease_v019=DOID:1324;2.62e-14;15!DOID:3905;1.07e-13;9!DOID:0050615;1.97e-13;16!DOID:3908;1.95e-11;5!DOID:1325;1.99e-08;7!DOID:3904;1.99e-08;7!DOID:3910;7.27e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1324,2.49e-14,15;DOID:3905,1.00e-13,9;DOID:0050615,1.87e-13,16;DOID:3908,1.58e-11,5;DOID:1325,2.15e-08,7;DOID:3904,2.15e-08,7;DOID:3910,7.03e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0002046!1.24e-29!5;UBERON:0004117!1.24e-29!5;UBERON:0007689!1.24e-29!5;UBERON:0007123!1.24e-29!5;UBERON:0003091!1.24e-29!5;UBERON:0005383!6.08e-27!3;UBERON:0005382!6.08e-27!3;UBERON:0000369!2.20e-20!4;UBERON:0002435!2.20e-20!4;UBERON:0000204!2.20e-20!4;UBERON:0010082!2.20e-20!4;UBERON:0009663!2.67e-20!7;UBERON:0002048!6.41e-20!22;UBERON:0000117!6.41e-20!22;UBERON:0000171!6.41e-20!22;UBERON:0000170!6.41e-20!22;UBERON:0005597!6.41e-20!22;UBERON:0000118!6.41e-20!22;UBERON:0000341!2.61e-19!2;UBERON:0001873!1.35e-18!2;UBERON:0010122!1.35e-18!2;UBERON:0002308!7.42e-16!9;UBERON:0002420!7.42e-16!9;UBERON:0000125!7.42e-16!9;UBERON:0007245!7.42e-16!9;UBERON:0010009!7.42e-16!9;UBERON:0010011!7.42e-16!9;UBERON:0000454!7.42e-16!9;UBERON:0005153!6.17e-15!37;UBERON:0005911!3.39e-14!82;UBERON:0009722!1.27e-13!11;UBERON:0007690!1.27e-13!11;UBERON:0005178!1.22e-12!34;UBERON:0002224!1.22e-12!34;UBERON:0005181!2.95e-12!35;UBERON:0008947!3.13e-11!38;UBERON:0003258!3.13e-11!38;UBERON:0002171!6.73e-11!1;UBERON:0006518!6.73e-11!1;UBERON:0008949!6.73e-11!1;UBERON:0000101!6.73e-11!1;UBERON:0002167!6.73e-11!1;UBERON:0005157!1.47e-10!51;UBERON:0001874!3.96e-10!1;UBERON:0008814!4.85e-10!15;UBERON:0000915!5.29e-08!52;UBERON:0004802!6.31e-08!19;UBERON:0000115!6.31e-08!19;UBERON:0000065!7.74e-08!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0002048;4.82e-29;22!UBERON:0000117;4.82e-29;22!UBERON:0000171;4.82e-29;22!UBERON:0000170;4.82e-29;22!UBERON:0000341;1.71e-27;2!UBERON:0002046;1.25e-24;5!UBERON:0005178;5.80e-16;34!UBERON:0002224;5.80e-16;34!UBERON:0002171;4.72e-15;1!UBERON:0006518;4.72e-15;1!UBERON:0008949;4.72e-15;1!UBERON:0000101;4.72e-15;1!UBERON:0002167;4.72e-15;1!UBERON:0005181;1.77e-14;35!UBERON:0004802;2.34e-11;19!UBERON:0000115;2.34e-11;19!UBERON:0000065;8.75e-11;44!UBERON:0004807;7.64e-10;22!UBERON:0000974;7.93e-10;6!UBERON:0000915;7.05e-08;52!UBERON:0004903;7.27e-08;2!UBERON:0002173;7.27e-08;2!UBERON:0002186;7.27e-08;2 | |||
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|short_description=p4@SFTA3 | |||
}} |
Revision as of 04:28, 11 September 2013
Short description: | p4@SFTA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_SFTA3_5end |
Coexpression cluster: | C95_lung_aorta_trachea_penis_Alveolar_throat_endometrioid |
Association with transcript: | -39bp_to_ENST00000518529_5end |
EntrezGene: | SFTA3 |
HGNC: | 18387 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.07e-14 | 1 |
epithelial cell of lung | 2.25e-11 | 19 |
Ontology term | p-value | n |
---|---|---|
lung cancer | 2.49e-14 | 15 |
lung carcinoma | 1.00e-13 | 9 |
respiratory system cancer | 1.87e-13 | 16 |
non-small cell lung carcinoma | 1.58e-11 | 5 |
bronchus cancer | 2.15e-08 | 7 |
bronchogenic carcinoma | 2.15e-08 | 7 |
lung adenocarcinoma | 7.03e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.