FFCP PHASE1:Hg19::chr14:76842457..76842494,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2103|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3473|TSSclassifier=W|UniProt=|association_with_transcript=-205bp_to_ENST00000507951_5end|coexpression_cluster_id=C2311|description=CAGE_peak_1_at_ESRRB_5end|id=chr14:76842457..76842494,+|ontology_enrichment_celltype=CL:0002322!3.55e-10!5|ontology_enrichment_celltype_v019=CL:0000333;1.69e-09;5|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0003056;3.99e-15;3!UBERON:0003918;5.61e-10;10!UBERON:0007687;5.61e-10;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:171;1.09e-26;10!DOID:3095;4.15e-12;22!DOID:2994;4.15e-12;22!DOID:169;4.66e-08;6|ontology_enrichment_disease_v019_2=DOID:171,1.09e-26,10;DOID:3095,4.15e-12,22;DOID:2994,4.15e-12,22;DOID:169,4.66e-08,6|ontology_enrichment_uberon=UBERON:0001049!3.78e-35!57;UBERON:0005068!3.78e-35!57;UBERON:0006241!3.78e-35!57;UBERON:0007135!3.78e-35!57;UBERON:0005743!3.16e-33!86;UBERON:0001017!3.20e-33!82;UBERON:0000073!7.62e-33!94;UBERON:0001016!7.62e-33!94;UBERON:0002346!1.87e-30!90;UBERON:0000955!1.37e-28!69;UBERON:0006238!1.37e-28!69;UBERON:0002616!7.67e-27!59;UBERON:0003075!1.64e-26!86;UBERON:0007284!1.64e-26!86;UBERON:0007023!2.20e-25!115;UBERON:0002780!1.22e-23!41;UBERON:0001890!1.22e-23!41;UBERON:0006240!1.22e-23!41;UBERON:0003080!6.29e-23!42;UBERON:0002020!1.76e-22!34;UBERON:0003528!1.76e-22!34;UBERON:0001893!2.14e-22!34;UBERON:0002791!7.08e-21!33;UBERON:0001869!4.00e-19!32;UBERON:0003056!1.61e-18!61;UBERON:0000924!1.36e-17!173;UBERON:0006601!1.36e-17!173;UBERON:0002619!2.34e-15!22;UBERON:0004121!4.87e-15!169;UBERON:0000033!5.13e-15!123;UBERON:0000153!8.82e-15!129;UBERON:0007811!8.82e-15!129;UBERON:0001950!1.34e-14!20;UBERON:0003076!1.39e-13!15;UBERON:0003057!1.39e-13!15;UBERON:0000956!3.56e-13!25;UBERON:0000203!3.56e-13!25;UBERON:0002308!8.40e-12!9;UBERON:0000125!8.40e-12!9;UBERON:0002298!6.37e-10!8;UBERON:0002420!1.12e-08!9;UBERON:0007245!1.12e-08!9;UBERON:0010009!1.12e-08!9;UBERON:0010011!1.12e-08!9;UBERON:0000454!1.12e-08!9;UBERON:0004733!2.16e-08!12;UBERON:0002028!2.16e-08!12;UBERON:0007277!2.16e-08!12;UBERON:0009663!4.87e-08!7;UBERON:0002240!5.09e-08!3;UBERON:0006331!7.89e-08!3;UBERON:0000988!1.04e-07!3;UBERON:0004732!1.18e-07!13;UBERON:0000025!1.64e-07!194;UBERON:0002021!2.12e-07!5;UBERON:0002106!3.67e-07!3;UBERON:0004854!3.67e-07!3;UBERON:0009034!3.67e-07!3;UBERON:0002095!3.67e-07!3;UBERON:0004782!3.67e-07!3;UBERON:0003281!3.67e-07!3;UBERON:0009664!3.67e-07!3;UBERON:0002296!3.67e-07!3;UBERON:0005602!3.67e-07!3;UBERON:0001179!3.67e-07!3;UBERON:0006293!3.67e-07!3;UBERON:0001871!5.49e-07!7|ontology_enrichment_uberon_v019=UBERON:0002346;8.64e-25;4!UBERON:0000923;8.64e-25;4!UBERON:0010316;8.64e-25;4!UBERON:0005291;8.64e-25;4!UBERON:0002050;5.73e-20;5!UBERON:0005423;5.73e-20;5!UBERON:0000013;1.69e-09;5!UBERON:0002410;1.69e-09;5!UBERON:0000966;1.92e-09;5!UBERON:0005388;1.92e-09;5!UBERON:0001802;1.92e-09;5|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.69e-09,5;UBERON:0002410,1.69e-09,5;UBERON:0000966,5.36e-08,6;UBERON:0005388,5.36e-08,6;UBERON:0001802,5.36e-08,6;UBERON:0002346,8.61e-07,86|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.397589304964456,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0,4.82640722538051,9.03974301488088,0,0,0,0,0.221158519862449,0.591095237907095,0.219385397153973,0,0.41827123283581,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.67401132980677,0,0.234264445725339,0,0,0,0,0,0.61214552326098,0,2.1045278718029,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,53.3314548242057,0,0,0.189932387867636,0,0,0,0.19980960958213,0,0.229073192331831,0,0,0,0,0,0,0,0,1.20084057741958,0.958337652243951,0,0,0,0,0,0,0,0,0,0.0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2103 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3473 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-205bp_to_ENST00000507951_5end | |||
|coexpression_cluster_id=C2311 | |||
|description=CAGE_peak_1_at_ESRRB_5end | |||
|id=chr14:76842457..76842494,+ | |||
|ontology_enrichment_celltype=CL:0002322!3.55e-10!5 | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.69e-09;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;3.99e-15;3!UBERON:0003918;5.61e-10;10!UBERON:0007687;5.61e-10;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;1.09e-26;10!DOID:3095;4.15e-12;22!DOID:2994;4.15e-12;22!DOID:169;4.66e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.09e-26,10;DOID:3095,4.15e-12,22;DOID:2994,4.15e-12,22;DOID:169,4.66e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.78e-35!57;UBERON:0005068!3.78e-35!57;UBERON:0006241!3.78e-35!57;UBERON:0007135!3.78e-35!57;UBERON:0005743!3.16e-33!86;UBERON:0001017!3.20e-33!82;UBERON:0000073!7.62e-33!94;UBERON:0001016!7.62e-33!94;UBERON:0002346!1.87e-30!90;UBERON:0000955!1.37e-28!69;UBERON:0006238!1.37e-28!69;UBERON:0002616!7.67e-27!59;UBERON:0003075!1.64e-26!86;UBERON:0007284!1.64e-26!86;UBERON:0007023!2.20e-25!115;UBERON:0002780!1.22e-23!41;UBERON:0001890!1.22e-23!41;UBERON:0006240!1.22e-23!41;UBERON:0003080!6.29e-23!42;UBERON:0002020!1.76e-22!34;UBERON:0003528!1.76e-22!34;UBERON:0001893!2.14e-22!34;UBERON:0002791!7.08e-21!33;UBERON:0001869!4.00e-19!32;UBERON:0003056!1.61e-18!61;UBERON:0000924!1.36e-17!173;UBERON:0006601!1.36e-17!173;UBERON:0002619!2.34e-15!22;UBERON:0004121!4.87e-15!169;UBERON:0000033!5.13e-15!123;UBERON:0000153!8.82e-15!129;UBERON:0007811!8.82e-15!129;UBERON:0001950!1.34e-14!20;UBERON:0003076!1.39e-13!15;UBERON:0003057!1.39e-13!15;UBERON:0000956!3.56e-13!25;UBERON:0000203!3.56e-13!25;UBERON:0002308!8.40e-12!9;UBERON:0000125!8.40e-12!9;UBERON:0002298!6.37e-10!8;UBERON:0002420!1.12e-08!9;UBERON:0007245!1.12e-08!9;UBERON:0010009!1.12e-08!9;UBERON:0010011!1.12e-08!9;UBERON:0000454!1.12e-08!9;UBERON:0004733!2.16e-08!12;UBERON:0002028!2.16e-08!12;UBERON:0007277!2.16e-08!12;UBERON:0009663!4.87e-08!7;UBERON:0002240!5.09e-08!3;UBERON:0006331!7.89e-08!3;UBERON:0000988!1.04e-07!3;UBERON:0004732!1.18e-07!13;UBERON:0000025!1.64e-07!194;UBERON:0002021!2.12e-07!5;UBERON:0002106!3.67e-07!3;UBERON:0004854!3.67e-07!3;UBERON:0009034!3.67e-07!3;UBERON:0002095!3.67e-07!3;UBERON:0004782!3.67e-07!3;UBERON:0003281!3.67e-07!3;UBERON:0009664!3.67e-07!3;UBERON:0002296!3.67e-07!3;UBERON:0005602!3.67e-07!3;UBERON:0001179!3.67e-07!3;UBERON:0006293!3.67e-07!3;UBERON:0001871!5.49e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;8.64e-25;4!UBERON:0000923;8.64e-25;4!UBERON:0010316;8.64e-25;4!UBERON:0005291;8.64e-25;4!UBERON:0002050;5.73e-20;5!UBERON:0005423;5.73e-20;5!UBERON:0000013;1.69e-09;5!UBERON:0002410;1.69e-09;5!UBERON:0000966;1.92e-09;5!UBERON:0005388;1.92e-09;5!UBERON:0001802;1.92e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.69e-09,5;UBERON:0002410,1.69e-09,5;UBERON:0000966,5.36e-08,6;UBERON:0005388,5.36e-08,6;UBERON:0001802,5.36e-08,6;UBERON:0002346,8.61e-07,86 | |||
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|short_description=p1@ESRRB | |||
}} |
Revision as of 05:38, 11 September 2013
Short description: | p1@ESRRB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ESRRB_5end |
Coexpression cluster: | C2311_neuroectodermal_eye_retina_neuroepithelioma_merkel_carcinoid_neuroblastoma |
Association with transcript: | -205bp_to_ENST00000507951_5end |
EntrezGene: | ESRRB |
HGNC: | 3473 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.69e-09 | 5 |
autonomic nervous system | 1.69e-09 | 5 |
retina | 5.36e-08 | 6 |
photoreceptor array | 5.36e-08 | 6 |
posterior segment of eyeball | 5.36e-08 | 6 |
neurectoderm | 8.61e-07 | 86 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.09e-26 | 10 |
germ cell and embryonal cancer | 4.15e-12 | 22 |
germ cell cancer | 4.15e-12 | 22 |
neuroendocrine tumor | 4.66e-08 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.