FFCP PHASE1:Hg19::chr14:96180451..96180468,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8115|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11648|TSSclassifier=S|UniProt=G3V4T4|association_with_transcript=0bp_to_ENST00000555202,ENST00000555886_5end|coexpression_cluster_id=C47|description=CAGE_peak_1_at_TCL1A_5end|id=chr14:96180451..96180468,-|ontology_enrichment_celltype=CL:0000945!1.70e-28!24;CL:0000826!1.70e-28!24;CL:0000236!1.93e-21!14;CL:0000738!9.37e-19!140;CL:0002087!1.18e-18!119;CL:0000542!6.35e-14!53;CL:0000051!6.35e-14!53;CL:0002031!1.87e-13!124;CL:0000037!2.40e-13!172;CL:0000566!2.40e-13!172;CL:0000838!5.59e-13!52;CL:0000988!1.10e-11!182;CL:0002032!3.64e-10!165;CL:0000837!3.64e-10!165|ontology_enrichment_celltype_v019=CL:0000945;1.90e-45;24!CL:0000236;1.50e-31;13!CL:0000542;1.10e-13;53!CL:0000784;1.83e-08;3!CL:0000226;1.39e-07;3!CL:0000842;1.39e-07;3|ontology_enrichment_celltype_v019_2=CL:0000945,2.17e-45,24;CL:0000826,2.17e-45,24;CL:0000236,2.10e-33,14;CL:0000542,2.29e-20,53;CL:0000051,2.29e-20,53;CL:0000838,7.00e-19,52;CL:0000738,1.20e-11,136;CL:0002087,2.04e-10,115;CL:0000784,1.83e-08,3;CL:0000037,2.03e-08,168;CL:0000817,5.72e-08,3;CL:0000226,1.31e-07,3;CL:0000842,1.31e-07,3;CL:0000988,1.48e-07,177|ontology_enrichment_development_v019=CL:0000051;1.10e-13;53!UBERON:0004872;5.43e-08;7|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.28e-14!115;UBERON:0000178!6.51e-13!15;UBERON:0000179!6.51e-13!15;UBERON:0000463!6.51e-13!15;UBERON:0002390!1.93e-10!102;UBERON:0003061!1.93e-10!102;UBERON:0002193!4.54e-10!112|ontology_enrichment_uberon_v019=UBERON:0000178;1.71e-20;15!UBERON:0000179;1.71e-20;15!UBERON:0000463;1.71e-20;15!UBERON:0002390;1.54e-15;32!UBERON:0002193;1.38e-10;42!UBERON:0000922;1.20e-08;49!UBERON:0004177;8.46e-08;5!UBERON:0005057;8.46e-08;5|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.64e-20,15;UBERON:0000179,1.64e-20,15;UBERON:0000463,1.64e-20,15;UBERON:0007023,9.20e-09,114|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,9.55167571849391,9.52366837619371,12.5937250101887,2.36018566109342,0.767658796194425,1.85779347979291,0,0,0,599.286263689213,263.723926264167,2.93600439334847,0,0,0,1.11957737119962,0.971680998056939,0,0.145398238779565,0.377875943688809,0.242584061187816,0.232429036905685,0.822335776043652,0,0,0.256160706529101,0.236482229888585,0,0.645484683583826,0,0.188242339542605,0.545812300115692,0,0,0.962787081228281,0,0,0.598390972864896,0,0.290209238628584,0,0,0.251248665256743,0.521482918420201,0,0,0.736555271975129,0,0,0,0,0.22465726229299,0,0.16072558669708,0,0,0.182664153764634,1061.25735410178,1021.82534167145,1151.9144837533,1173.08138183533,1394.57922284643,1055.82023219639,1236.15391210769,1158.22125800593,341.527781465669,89.2600527843827,111.623782612567,1.32171328579026,0,2.37045676297569,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0,0,0,0,0,0.296573126324121,0.535081656179426,1.04535523804977,0,0,0,0,0.318565414324097,0,0,1.05402583354441,0.76791966692651,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,1.76821751921912,0,0,0.324547393654683,0,0.26591592103773,226.089111841464,688.109877668494,504.810744306879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70763188581434,0.795178609928912,1.2781333715647,0.518305275076852,1.26160425437814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,25.8460032653609,10.138567438475,7.68438416184799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,54.8043417970743,48.936781257112,39.3056559150172,92.4339288776221,121.351870560427,55.120231451381,58.8634266589545,48.3806357539505,0,0,0,879.592231045152,1041.04664083803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,102.777616577587,0,0,2.21552649829925,0,0,0,0,6.60910817767455,31.1328020051022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.95261931078505,0.176915129006678,9.77648231893801,0,0,0,0,4.81546588379273,0,70.0626390588157,0,0,0.394584402849391,4.83962864194656,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45483524732629,0,0.225980740780532,0,0,0,0,0.160317640503067,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0.279282401272254,0.229160424011684,0,0,0.429226048136571,0.223171457441873,2.21705459206197,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,1.81253126788156,1.67854682031994,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8115 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11648 | |||
|TSSclassifier=S | |||
|UniProt=G3V4T4 | |||
|association_with_transcript=0bp_to_ENST00000555202,ENST00000555886_5end | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_1_at_TCL1A_5end | |||
|id=chr14:96180451..96180468,- | |||
|ontology_enrichment_celltype=CL:0000945!1.70e-28!24;CL:0000826!1.70e-28!24;CL:0000236!1.93e-21!14;CL:0000738!9.37e-19!140;CL:0002087!1.18e-18!119;CL:0000542!6.35e-14!53;CL:0000051!6.35e-14!53;CL:0002031!1.87e-13!124;CL:0000037!2.40e-13!172;CL:0000566!2.40e-13!172;CL:0000838!5.59e-13!52;CL:0000988!1.10e-11!182;CL:0002032!3.64e-10!165;CL:0000837!3.64e-10!165 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.90e-45;24!CL:0000236;1.50e-31;13!CL:0000542;1.10e-13;53!CL:0000784;1.83e-08;3!CL:0000226;1.39e-07;3!CL:0000842;1.39e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.17e-45,24;CL:0000826,2.17e-45,24;CL:0000236,2.10e-33,14;CL:0000542,2.29e-20,53;CL:0000051,2.29e-20,53;CL:0000838,7.00e-19,52;CL:0000738,1.20e-11,136;CL:0002087,2.04e-10,115;CL:0000784,1.83e-08,3;CL:0000037,2.03e-08,168;CL:0000817,5.72e-08,3;CL:0000226,1.31e-07,3;CL:0000842,1.31e-07,3;CL:0000988,1.48e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000051;1.10e-13;53!UBERON:0004872;5.43e-08;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.28e-14!115;UBERON:0000178!6.51e-13!15;UBERON:0000179!6.51e-13!15;UBERON:0000463!6.51e-13!15;UBERON:0002390!1.93e-10!102;UBERON:0003061!1.93e-10!102;UBERON:0002193!4.54e-10!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.71e-20;15!UBERON:0000179;1.71e-20;15!UBERON:0000463;1.71e-20;15!UBERON:0002390;1.54e-15;32!UBERON:0002193;1.38e-10;42!UBERON:0000922;1.20e-08;49!UBERON:0004177;8.46e-08;5!UBERON:0005057;8.46e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.64e-20,15;UBERON:0000179,1.64e-20,15;UBERON:0000463,1.64e-20,15;UBERON:0007023,9.20e-09,114 | |||
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|short_description=p1@TCL1A | |||
}} |
Revision as of 06:13, 11 September 2013
Short description: | p1@TCL1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TCL1A_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 0bp_to_ENST00000555202, ENST00000555886_5end |
EntrezGene: | TCL1A |
HGNC: | 11648 |
UniProt: | G3V4T4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.17e-45 | 24 |
pro-B cell | 2.17e-45 | 24 |
B cell | 2.10e-33 | 14 |
lymphocyte | 2.29e-20 | 53 |
common lymphoid progenitor | 2.29e-20 | 53 |
lymphoid lineage restricted progenitor cell | 7.00e-19 | 52 |
leukocyte | 1.20e-11 | 136 |
nongranular leukocyte | 2.04e-10 | 115 |
plasmacytoid dendritic cell | 1.83e-08 | 3 |
hematopoietic stem cell | 2.03e-08 | 168 |
precursor B cell | 5.72e-08 | 3 |
single nucleate cell | 1.31e-07 | 3 |
mononuclear cell | 1.31e-07 | 3 |
hematopoietic cell | 1.48e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
blood | 1.64e-20 | 15 |
haemolymphatic fluid | 1.64e-20 | 15 |
organism substance | 1.64e-20 | 15 |
adult organism | 9.20e-09 | 114 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.