FFCP PHASE1:Hg19::chr15:39886357..39886368,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7057|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11785|TSSclassifier=S|UniProt=|association_with_transcript=88bp_to_ENST00000559746_5end|coexpression_cluster_id=C142|description=CAGE_peak_31_at_THBS1_5end|id=chr15:39886357..39886368,+|ontology_enrichment_celltype=CL:0000055!5.61e-13!180;CL:0002371!1.21e-12!591;CL:0000057!2.56e-12!75;CL:0000548!9.02e-12!679;CL:0000004!9.02e-12!679;CL:0000255!9.02e-12!679;CL:0000144!1.16e-11!625;CL:0000115!1.35e-11!35;CL:0000012!2.34e-11!682;CL:0000222!3.03e-11!119;CL:0002139!3.79e-11!24;CL:0000220!7.07e-09!246;CL:0002078!1.33e-08!44;CL:0002321!1.44e-08!248;CL:0000071!7.46e-08!18;CL:0002546!7.46e-08!18;CL:0000213!1.14e-07!57;CL:0000215!1.14e-07!57;CL:0002334!1.76e-07!12;CL:0000063!3.53e-07!578;CL:0000003!8.60e-07!722|ontology_enrichment_celltype_v019=CL:0002620;5.14e-13;23!CL:0002334;9.38e-09;12!CL:0000057;2.86e-07;73!CL:0002580;4.95e-07;3!CL:0002615;8.82e-07;3!CL:0000349;9.32e-07;19|ontology_enrichment_celltype_v019_2=CL:0000057,8.06e-19,76;CL:0002620,2.15e-13,23;CL:0002334,7.78e-09,12;CL:0000048,1.20e-07,427;CL:0000723,2.81e-07,433;CL:0002580,4.42e-07,3;CL:0000034,8.36e-07,441|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:17;3.57e-09;5!DOID:450;3.57e-09;5!DOID:66;3.57e-09;5!DOID:423;3.57e-09;5!DOID:0080000;3.57e-09;5!DOID:11722;3.57e-09;5|ontology_enrichment_disease_v019_2=DOID:17,2.02e-09,5;DOID:450,2.02e-09,5;DOID:66,2.02e-09,5;DOID:423,2.02e-09,5;DOID:0080000,2.02e-09,5;DOID:11722,2.02e-09,5|ontology_enrichment_uberon=UBERON:0000055!5.19e-15!69;UBERON:0002049!1.69e-14!79;UBERON:0007798!1.69e-14!79;UBERON:0001981!1.59e-13!60;UBERON:0007500!1.59e-13!60;UBERON:0004537!1.59e-13!60;UBERON:0006965!1.59e-13!60;UBERON:0004872!4.25e-13!84;UBERON:0003914!5.71e-10!118;UBERON:0001009!9.87e-10!113;UBERON:0001637!1.30e-09!42;UBERON:0003509!1.30e-09!42;UBERON:0004572!1.30e-09!42;UBERON:0004535!1.38e-09!110;UBERON:0001986!7.46e-08!18;UBERON:0004638!7.46e-08!18;UBERON:0004852!7.46e-08!18;UBERON:0000490!9.96e-08!138;UBERON:0003102!2.62e-07!95;UBERON:0000487!2.94e-07!22;UBERON:0000468!3.89e-07!659;UBERON:0005631!7.93e-07!14;UBERON:0000158!7.93e-07!14;UBERON:0004923!9.04e-07!57|ontology_enrichment_uberon_v019=UBERON:0003688;1.94e-11;6!UBERON:0002358;1.94e-11;6!UBERON:0003684;1.94e-11;6!UBERON:0001178;1.94e-11;6!UBERON:0005631;1.28e-09;10!UBERON:0000158;1.28e-09;10!UBERON:0002097;3.16e-09;41!UBERON:0000305;1.77e-08;7!UBERON:0002199;2.52e-07;46!UBERON:0002416;2.52e-07;46!UBERON:0004457;2.79e-07;9!UBERON:0000042;2.79e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0002097,4.09e-12,41;UBERON:0003688,1.85e-11,6;UBERON:0002358,1.85e-11,6;UBERON:0003684,1.85e-11,6;UBERON:0001178,1.85e-11,6;UBERON:0002199,2.48e-11,46;UBERON:0002416,2.48e-11,46;UBERON:0004871,1.39e-09,8;UBERON:0000305,2.64e-08,7;UBERON:0004923,6.10e-08,66;UBERON:0005631,7.96e-08,14;UBERON:0000158,7.96e-08,14|phase1_expression=5.4503513781167,12.203729861786,2.11431606143957,19.0139266870948,4.02264984984559,7.85104671690332,0,0,0,0.245733936501509,0,1.09220686065086,1.58260186937072,0.123766352960047,0,2.6893005858071,3.01347264011988,0.730310090387373,1.95173119516203,0.123121058076788,0,0,0,0.136874425072884,0.376627918784408,0,0,0,0,0,0.154816123316076,0.919421224478927,0,0,0,0,0,0,1.20326668482085,0,0.447830948479849,0,0.515151135268373,0.436194716338694,0.377875943688809,0,0.929716147622738,0,0,2.3015391385772,0.256160706529101,0,1.37898272294647,0,0,1.12945403725563,0,0.224723484445085,2.14258724659632,0,0,0.659702600373432,0,0,3.48251086354301,0,0,0.75374599577023,0,0.217188844705117,1.81619850790011,0,0,0,0,0,0,0.450530678524519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15076305659177,0.361439152384566,1.50401373190767,0.434539556882471,0.795285947051099,0.973269740605272,0,0.221729397462564,0.087834785693126,0.0654895377488563,0.364295288292542,0,0,0,0,0,0,0,0.79504962946682,0,1.38856200643038,0.56530794192401,0.838998872419812,2.20094433552054,1.46296476575767,0.516833518338658,1.42306505074684,2.34304428935269,1.20848795132744,0.760272105718513,1.46437234528902,0.367663080345869,7.29127753093584,0.803697554556718,0.44905874525234,0.788280363383256,0,0.949265659568129,0.916008719652036,0,0,0.436094052142534,6.95760732373446,2.27934920996244,0.926864265692532,1.72101972449288,0.354668382198357,0,3.20246987189115,2.4666754841716,0,0.404132016209064,0.163461903113459,0.302714855289863,0,0,0,0,0,0,0,0,0,0.245668634623536,0.413303124703062,0,7.17074094907815,0,0,0,0.125118519871964,0,0.438977620880838,4.59731693698529,1.05166641234618,0.340296549480063,3.7671823494661,2.13557388818567,2.96704661623387,3.00091096084402,1.95799805553034,2.06112432036503,1.30281799432113,1.85653965465393,1.55899208257918,1.7670364197088,2.02509777013059,1.61646056818812,3.19508633264953,1.81353776809752,1.18692414617341,1.15956511897978,0.272746120590835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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7057 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11785 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=88bp_to_ENST00000559746_5end | |||
|coexpression_cluster_id=C142 | |||
|description=CAGE_peak_31_at_THBS1_5end | |||
|id=chr15:39886357..39886368,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.61e-13!180;CL:0002371!1.21e-12!591;CL:0000057!2.56e-12!75;CL:0000548!9.02e-12!679;CL:0000004!9.02e-12!679;CL:0000255!9.02e-12!679;CL:0000144!1.16e-11!625;CL:0000115!1.35e-11!35;CL:0000012!2.34e-11!682;CL:0000222!3.03e-11!119;CL:0002139!3.79e-11!24;CL:0000220!7.07e-09!246;CL:0002078!1.33e-08!44;CL:0002321!1.44e-08!248;CL:0000071!7.46e-08!18;CL:0002546!7.46e-08!18;CL:0000213!1.14e-07!57;CL:0000215!1.14e-07!57;CL:0002334!1.76e-07!12;CL:0000063!3.53e-07!578;CL:0000003!8.60e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0002620;5.14e-13;23!CL:0002334;9.38e-09;12!CL:0000057;2.86e-07;73!CL:0002580;4.95e-07;3!CL:0002615;8.82e-07;3!CL:0000349;9.32e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.06e-19,76;CL:0002620,2.15e-13,23;CL:0002334,7.78e-09,12;CL:0000048,1.20e-07,427;CL:0000723,2.81e-07,433;CL:0002580,4.42e-07,3;CL:0000034,8.36e-07,441 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;3.57e-09;5!DOID:450;3.57e-09;5!DOID:66;3.57e-09;5!DOID:423;3.57e-09;5!DOID:0080000;3.57e-09;5!DOID:11722;3.57e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.02e-09,5;DOID:450,2.02e-09,5;DOID:66,2.02e-09,5;DOID:423,2.02e-09,5;DOID:0080000,2.02e-09,5;DOID:11722,2.02e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0000055!5.19e-15!69;UBERON:0002049!1.69e-14!79;UBERON:0007798!1.69e-14!79;UBERON:0001981!1.59e-13!60;UBERON:0007500!1.59e-13!60;UBERON:0004537!1.59e-13!60;UBERON:0006965!1.59e-13!60;UBERON:0004872!4.25e-13!84;UBERON:0003914!5.71e-10!118;UBERON:0001009!9.87e-10!113;UBERON:0001637!1.30e-09!42;UBERON:0003509!1.30e-09!42;UBERON:0004572!1.30e-09!42;UBERON:0004535!1.38e-09!110;UBERON:0001986!7.46e-08!18;UBERON:0004638!7.46e-08!18;UBERON:0004852!7.46e-08!18;UBERON:0000490!9.96e-08!138;UBERON:0003102!2.62e-07!95;UBERON:0000487!2.94e-07!22;UBERON:0000468!3.89e-07!659;UBERON:0005631!7.93e-07!14;UBERON:0000158!7.93e-07!14;UBERON:0004923!9.04e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.94e-11;6!UBERON:0002358;1.94e-11;6!UBERON:0003684;1.94e-11;6!UBERON:0001178;1.94e-11;6!UBERON:0005631;1.28e-09;10!UBERON:0000158;1.28e-09;10!UBERON:0002097;3.16e-09;41!UBERON:0000305;1.77e-08;7!UBERON:0002199;2.52e-07;46!UBERON:0002416;2.52e-07;46!UBERON:0004457;2.79e-07;9!UBERON:0000042;2.79e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,4.09e-12,41;UBERON:0003688,1.85e-11,6;UBERON:0002358,1.85e-11,6;UBERON:0003684,1.85e-11,6;UBERON:0001178,1.85e-11,6;UBERON:0002199,2.48e-11,46;UBERON:0002416,2.48e-11,46;UBERON:0004871,1.39e-09,8;UBERON:0000305,2.64e-08,7;UBERON:0004923,6.10e-08,66;UBERON:0005631,7.96e-08,14;UBERON:0000158,7.96e-08,14 | |||
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| |||
|short_description=p31@THBS1 | |||
}} |
Revision as of 06:51, 11 September 2013
Short description: | p31@THBS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_31_at_THBS1_5end |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | 88bp_to_ENST00000559746_5end |
EntrezGene: | THBS1 |
HGNC: | 11785 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.06e-19 | 76 |
skin fibroblast | 2.15e-13 | 23 |
preadipocyte | 7.78e-09 | 12 |
multi fate stem cell | 1.20e-07 | 427 |
somatic stem cell | 2.81e-07 | 433 |
preadipocyte of the breast | 4.42e-07 | 3 |
stem cell | 8.36e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
skin of body | 4.09e-12 | 41 |
omentum | 1.85e-11 | 6 |
peritoneum | 1.85e-11 | 6 |
abdominal cavity | 1.85e-11 | 6 |
visceral peritoneum | 1.85e-11 | 6 |
integument | 2.48e-11 | 46 |
integumental system | 2.48e-11 | 46 |
somatic layer of lateral plate mesoderm | 1.39e-09 | 8 |
amnion | 2.64e-08 | 7 |
organ component layer | 6.10e-08 | 66 |
extraembryonic membrane | 7.96e-08 | 14 |
membranous layer | 7.96e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.02e-09 | 5 |
myotonic disease | 2.02e-09 | 5 |
muscle tissue disease | 2.02e-09 | 5 |
myopathy | 2.02e-09 | 5 |
muscular disease | 2.02e-09 | 5 |
myotonic dystrophy | 2.02e-09 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.