FFCP PHASE1:Hg19::chr15:80842672..80842689,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C3522|description=CAGE_peak_at_chr15:80842672..80842689,-|id=chr15:80842672..80842689,-|ontology_enrichment_celltype=CL:0000055!6.21e-35!180;CL:0000057!6.51e-29!75;CL:0002620!7.90e-22!23;CL:0000680!6.51e-14!57;CL:0000056!6.51e-14!57;CL:0000355!6.51e-14!57;CL:0000187!3.00e-13!54;CL:0000183!1.75e-12!59;CL:0000393!5.35e-11!60;CL:0000211!5.35e-11!60;CL:0000192!6.96e-11!42;CL:0000514!6.96e-11!42;CL:0000048!9.43e-10!430;CL:0000359!2.06e-09!32;CL:0000723!3.22e-09!436;CL:0000034!1.54e-08!444;CL:0000222!6.43e-08!119;CL:0002556!9.21e-08!6|ontology_enrichment_celltype_v019=CL:0002620;3.36e-24;23!CL:1000306;4.80e-12;4!CL:0002547;4.80e-12;4!CL:0000057;1.95e-08;73!CL:0000708;5.17e-08;3!CL:0002590;1.61e-07;3|ontology_enrichment_celltype_v019_2=CL:0002620,4.07e-24,23;CL:0000057,1.81e-21,76;CL:1000306,3.25e-12,4;CL:0002547,3.25e-12,4;CL:0000708,5.45e-08,3;CL:0002590,1.30e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:17!1.01e-07!5;DOID:450!1.01e-07!5;DOID:66!1.01e-07!5;DOID:423!1.01e-07!5;DOID:0080000!1.01e-07!5;DOID:11722!1.01e-07!5|ontology_enrichment_disease_v019=DOID:17;3.19e-16;5!DOID:450;3.19e-16;5!DOID:66;3.19e-16;5!DOID:423;3.19e-16;5!DOID:0080000;3.19e-16;5!DOID:11722;3.19e-16;5!DOID:1192;2.67e-07;3|ontology_enrichment_disease_v019_2=DOID:17,4.14e-16,5;DOID:450,4.14e-16,5;DOID:66,4.14e-16,5;DOID:423,4.14e-16,5;DOID:0080000,4.14e-16,5;DOID:11722,4.14e-16,5;DOID:1192,1.69e-07,3|ontology_enrichment_uberon=UBERON:0000914!5.79e-16!83;UBERON:0002329!5.79e-16!83;UBERON:0003077!5.79e-16!83;UBERON:0003059!5.79e-16!83;UBERON:0007282!5.79e-16!83;UBERON:0009618!5.79e-16!83;UBERON:0007285!5.79e-16!83;UBERON:0004290!3.20e-14!70;UBERON:0000475!3.82e-14!365;UBERON:0002097!1.11e-13!40;UBERON:0001134!2.38e-12!61;UBERON:0002036!2.38e-12!61;UBERON:0003082!2.38e-12!61;UBERON:0002199!2.93e-12!45;UBERON:0002416!2.93e-12!45;UBERON:0000486!5.54e-12!82;UBERON:0002385!1.20e-11!63;UBERON:0001015!1.20e-11!63;UBERON:0000383!1.20e-11!63;UBERON:0005256!1.38e-10!143;UBERON:0003102!3.32e-08!95;UBERON:0001758!9.21e-08!6;UBERON:0003672!9.21e-08!6;UBERON:0002100!1.22e-07!216;UBERON:0000119!1.88e-07!312|ontology_enrichment_uberon_v019=UBERON:0002097;7.76e-15;41!UBERON:0002199;1.86e-14;46!UBERON:0002416;1.86e-14;46!UBERON:0004797;4.80e-12;4!UBERON:0000415;4.80e-12;4!UBERON:0007240;4.80e-12;4!UBERON:0005742;4.80e-12;4!UBERON:0005734;4.80e-12;4!UBERON:0004664;4.80e-12;4!UBERON:0004663;4.80e-12;4!UBERON:0003102;2.36e-10;50!UBERON:0000947;5.11e-08;21!UBERON:0010191;5.11e-08;21!UBERON:0003210;5.17e-08;3!UBERON:0004573;9.94e-07;33!UBERON:0004571;9.94e-07;33|ontology_enrichment_uberon_v019_2=UBERON:0002097,6.62e-21,41;UBERON:0002199,2.67e-18,46;UBERON:0002416,2.67e-18,46;UBERON:0000415,3.25e-12,4;UBERON:0007240,3.25e-12,4;UBERON:0005742,3.25e-12,4;UBERON:0005734,3.25e-12,4;UBERON:0004664,3.25e-12,4;UBERON:0004663,3.25e-12,4;UBERON:0003102,2.25e-09,99;UBERON:0000947,4.49e-08,21;UBERON:0010191,4.49e-08,21;UBERON:0003210,5.45e-08,3;UBERON:0004797,3.70e-07,7|phase1_expression=0.363356758541113,0.428201047781966,0.563817616383885,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,1.20538905604795,1.46062018077475,0,0.246242116153576,1.02000345622126,0.313454721478088,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0.361439152384566,0,0,0,0,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,1.77282716330412,8.73900593367244,2.58152958673932,0.709336764396714,1.12135520028461,0,0.24666754841716,0.933633106199299,0,0,0.454072282934794,0,0.234321431833797,0,0,0.149448680551801,0.23486899728753,0.485618833104395,0.98315564691574,0.204154171254893,0.368502951935304,0,0,0,0.910161361938026,0.718618141816238,0.505008341862199,0.375355559615893,1.6623846929051,2.19488810440419,0.919463387397059,0.300476117813194,0,4.84352016359927,1.06778694409284,1.27159140695737,2.70081986475962,0.824420233907511,2.57640540045629,1.8611685633159,1.0126579934476,0.487185025805993,2.01947019395292,0.828449087780694,3.39456719319505,3.55009592516614,0.906768884048762,2.20428770003634,0,0,0,0,0,0,0,0,0,0,0,4.14404764057442,1.39310378409594,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.93376771119587,3.05172048183296,0.95339771567235,0.387815147273333,0,0,0.797814349754612,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,1.42636905040718,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0.178428988797162,0,0.35142424497814,0.902838299183157,0,0,0,0,0.6950689157446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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3522 | |||
|description=CAGE_peak_at_chr15:80842672..80842689,- | |||
|id=chr15:80842672..80842689,- | |||
|ontology_enrichment_celltype=CL:0000055!6.21e-35!180;CL:0000057!6.51e-29!75;CL:0002620!7.90e-22!23;CL:0000680!6.51e-14!57;CL:0000056!6.51e-14!57;CL:0000355!6.51e-14!57;CL:0000187!3.00e-13!54;CL:0000183!1.75e-12!59;CL:0000393!5.35e-11!60;CL:0000211!5.35e-11!60;CL:0000192!6.96e-11!42;CL:0000514!6.96e-11!42;CL:0000048!9.43e-10!430;CL:0000359!2.06e-09!32;CL:0000723!3.22e-09!436;CL:0000034!1.54e-08!444;CL:0000222!6.43e-08!119;CL:0002556!9.21e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.36e-24;23!CL:1000306;4.80e-12;4!CL:0002547;4.80e-12;4!CL:0000057;1.95e-08;73!CL:0000708;5.17e-08;3!CL:0002590;1.61e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,4.07e-24,23;CL:0000057,1.81e-21,76;CL:1000306,3.25e-12,4;CL:0002547,3.25e-12,4;CL:0000708,5.45e-08,3;CL:0002590,1.30e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!1.01e-07!5;DOID:450!1.01e-07!5;DOID:66!1.01e-07!5;DOID:423!1.01e-07!5;DOID:0080000!1.01e-07!5;DOID:11722!1.01e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:17;3.19e-16;5!DOID:450;3.19e-16;5!DOID:66;3.19e-16;5!DOID:423;3.19e-16;5!DOID:0080000;3.19e-16;5!DOID:11722;3.19e-16;5!DOID:1192;2.67e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:17,4.14e-16,5;DOID:450,4.14e-16,5;DOID:66,4.14e-16,5;DOID:423,4.14e-16,5;DOID:0080000,4.14e-16,5;DOID:11722,4.14e-16,5;DOID:1192,1.69e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0000914!5.79e-16!83;UBERON:0002329!5.79e-16!83;UBERON:0003077!5.79e-16!83;UBERON:0003059!5.79e-16!83;UBERON:0007282!5.79e-16!83;UBERON:0009618!5.79e-16!83;UBERON:0007285!5.79e-16!83;UBERON:0004290!3.20e-14!70;UBERON:0000475!3.82e-14!365;UBERON:0002097!1.11e-13!40;UBERON:0001134!2.38e-12!61;UBERON:0002036!2.38e-12!61;UBERON:0003082!2.38e-12!61;UBERON:0002199!2.93e-12!45;UBERON:0002416!2.93e-12!45;UBERON:0000486!5.54e-12!82;UBERON:0002385!1.20e-11!63;UBERON:0001015!1.20e-11!63;UBERON:0000383!1.20e-11!63;UBERON:0005256!1.38e-10!143;UBERON:0003102!3.32e-08!95;UBERON:0001758!9.21e-08!6;UBERON:0003672!9.21e-08!6;UBERON:0002100!1.22e-07!216;UBERON:0000119!1.88e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;7.76e-15;41!UBERON:0002199;1.86e-14;46!UBERON:0002416;1.86e-14;46!UBERON:0004797;4.80e-12;4!UBERON:0000415;4.80e-12;4!UBERON:0007240;4.80e-12;4!UBERON:0005742;4.80e-12;4!UBERON:0005734;4.80e-12;4!UBERON:0004664;4.80e-12;4!UBERON:0004663;4.80e-12;4!UBERON:0003102;2.36e-10;50!UBERON:0000947;5.11e-08;21!UBERON:0010191;5.11e-08;21!UBERON:0003210;5.17e-08;3!UBERON:0004573;9.94e-07;33!UBERON:0004571;9.94e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,6.62e-21,41;UBERON:0002199,2.67e-18,46;UBERON:0002416,2.67e-18,46;UBERON:0000415,3.25e-12,4;UBERON:0007240,3.25e-12,4;UBERON:0005742,3.25e-12,4;UBERON:0005734,3.25e-12,4;UBERON:0004664,3.25e-12,4;UBERON:0004663,3.25e-12,4;UBERON:0003102,2.25e-09,99;UBERON:0000947,4.49e-08,21;UBERON:0010191,4.49e-08,21;UBERON:0003210,5.45e-08,3;UBERON:0004797,3.70e-07,7 | |||
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|short_description=p@chr15:80842672..80842689,- | |||
}} |
Revision as of 08:31, 11 September 2013
Short description: | p@chr15:80842672..80842689, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:80842672..80842689, - |
Coexpression cluster: | C3522_Fibroblast_Smooth_basal_mesenchymal_Meningeal_Ewing_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 4.07e-24 | 23 |
fibroblast | 1.81e-21 | 76 |
fibroblast of tunica adventitia of artery | 3.25e-12 | 4 |
fibroblast of the aortic adventitia | 3.25e-12 | 4 |
leptomeningeal cell | 5.45e-08 | 3 |
smooth muscle cell of the brain vasculature | 1.30e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skin of body | 6.62e-21 | 41 |
integument | 2.67e-18 | 46 |
integumental system | 2.67e-18 | 46 |
artery wall | 3.25e-12 | 4 |
tunica adventitia of artery | 3.25e-12 | 4 |
adventitia | 3.25e-12 | 4 |
tunica adventitia of blood vessel | 3.25e-12 | 4 |
aorta tunica adventitia | 3.25e-12 | 4 |
aorta wall | 3.25e-12 | 4 |
surface structure | 2.25e-09 | 99 |
aorta | 4.49e-08 | 21 |
aortic system | 4.49e-08 | 21 |
blood-cerebrospinal fluid barrier | 5.45e-08 | 3 |
blood vessel layer | 3.70e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.14e-16 | 5 |
myotonic disease | 4.14e-16 | 5 |
muscle tissue disease | 4.14e-16 | 5 |
myopathy | 4.14e-16 | 5 |
muscular disease | 4.14e-16 | 5 |
myotonic dystrophy | 4.14e-16 | 5 |
peripheral nervous system neoplasm | 1.69e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.