FFCP PHASE1:Hg19::chr16:10674496..10674527,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2013|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3334|TSSclassifier=S|UniProt=|association_with_transcript=-7bp_to_ENST00000342147_5end|description=CAGE_peak_3_at_EMP2_5end|id=chr16:10674496..10674527,-|ontology_enrichment_celltype=CL:0000055!9.11e-10!180;CL:0000066!2.83e-07!254|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!8.52e-15!659;UBERON:0000481!5.64e-14!347;UBERON:0004119!1.36e-12!169;UBERON:0000925!1.36e-12!169;UBERON:0006595!1.36e-12!169;UBERON:0000475!1.38e-12!365;UBERON:0000467!1.25e-11!625;UBERON:0000480!2.28e-11!626;UBERON:0001007!3.18e-11!155;UBERON:0001555!3.18e-11!155;UBERON:0007026!3.18e-11!155;UBERON:0003104!1.15e-10!238;UBERON:0009142!1.15e-10!238;UBERON:0000119!3.00e-10!312;UBERON:0000064!4.62e-10!219;UBERON:0000483!4.62e-10!309;UBERON:0000077!1.46e-09!130;UBERON:0003102!5.46e-09!95;UBERON:0000477!5.99e-09!286;UBERON:0000922!1.15e-08!612;UBERON:0004921!1.77e-08!129;UBERON:0004185!1.77e-08!129;UBERON:0002100!2.18e-08!216;UBERON:0002050!6.89e-08!605;UBERON:0005423!6.89e-08!605;UBERON:0000923!1.30e-07!604;UBERON:0005291!1.30e-07!604;UBERON:0006598!1.30e-07!604;UBERON:0002532!1.30e-07!604;UBERON:0001048!7.75e-07!168;UBERON:0005256!9.38e-07!143|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.78e-12,160;UBERON:0000925,1.78e-12,160;UBERON:0006595,1.78e-12,160;UBERON:0001007,4.91e-11,145;UBERON:0001555,4.91e-11,145;UBERON:0007026,4.91e-11,145;UBERON:0004921,1.28e-08,118;UBERON:0003102,2.34e-07,99;UBERON:0000119,8.77e-07,309;UBERON:0000483,9.92e-07,306|phase1_expression=0.726713517082227,0.856402095563933,0.140954404095971,0,0.446961094427288,1.74467704820074,2.53299878168311,1.89515962028049,2.35067065379855,2.45733936501509,11.1648186875588,6.11635841964482,3.16520373874144,2.47532705920093,3.31397375727916,2.01697543935533,1.80808358407193,0,0.975865597581014,1.84681587115182,5.10001728110633,4.07491137921514,3.43483184557268,2.87436292653057,3.51519390865448,0,0,0,0,0,0.154816123316076,1.83884244895785,2.409647350226,2.21852406100073,0,0,0,0,0,0,2.01523926815932,1.29557466407592,2.57575567634187,0,0,0,0.232429036905685,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,1.40648818027883,3.61439152384566,2.50668955317945,2.462390822334,4.7717156823066,5.83961844363163,1.79616152611729,2.4390233720882,2.19586964232815,2.35762335895883,5.10013403609559,1.85392221392215,0,0,0,0,0,0,0.993812036833525,1.72046919021225,1.04142150482278,0,1.25849830862972,1.10047216776027,1.46296476575767,1.8089173141853,0,2.67776490211736,2.01414658554573,1.52054421143703,2.4406205754817,0.735326160691737,0,1.60739510911344,2.69435247151404,2.25222960966644,3.06633274931766,1.89853131913626,1.46561395144326,0,0,3.05265836499774,1.98788780678127,1.64619665163954,0.264818361626438,3.15520282823695,2.83734705758686,1.12135520028461,0,0.98667019366864,1.24484414159907,0.404132016209064,2.7788523529288,1.05950199351452,0.576175924479999,0,1.24864030732128,1.71141546463335,2.54062756938062,5.04968344168189,3.72307772046703,4.6348766211742,2.04154171254893,4.17636678860011,2.78979609174567,4.75201142912821,2.47266929278557,1.82032272387605,3.59309070908119,2.02003336744879,5.12985931475053,1.6623846929051,4.38977620880838,1.22595118319608,4.35690370829131,1.58805056424029,3.22901344239952,2.56268866582281,3.60284231971255,5.40163972951924,1.95799805553034,1.54584324027377,2.04728541964749,6.07594796068558,2.24105111870757,4.29137416214995,1.93304787148829,0.80823028409406,3.55009592516614,1.91428986632517,2.20428770003634,0,1.36373060295417,1.14721838155602,1.46368447355514,0.795178609928912,0.813357600086629,2.17688215532278,2.01856680700503,1.45990943630332,3.12899064659632,1.28648187638577,2.76269842704961,3.71494342425583,2.16563844500876,4.73227200159376,3.03452442140583,4.57920956778616,4.96322877295773,3.4860711054785,3.55905928666645,5.12358971008625,3.72820783738158,1.92373578473195,0,1.40241773803446,2.4694440679884,1.47008711385542,0,1.96565443335525,4.13552934676983,0,2.82873408649161,1.02940686179115,1.20725313949488,1.1240175325762,3.51851403440708,2.31471112896324,0,3.11980435583874,0,1.85488647960123,0.234817388471643,1.58803092537181,1.85194205030644,2.66355813128438,7.90204397959275,6.86788929675898,0.492434012174795,0,0.743155811443641,0,1.17587489739202,0.567100388969546,1.97028749946266,2.03443756959773,2.30029607499127,0,0,0,0,0,3.30189050319279,1.90994212779139,0,3.4214489204541,4.8328921570562,3.00343057843917,1.14330573052231,2.24262168690721,0.87192013766656,2.56684000373325,0.129271715757778,0,6.762422020448,0.26593811658487,1.0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2013 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3334 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-7bp_to_ENST00000342147_5end | |||
|description=CAGE_peak_3_at_EMP2_5end | |||
|id=chr16:10674496..10674527,- | |||
|ontology_enrichment_celltype=CL:0000055!9.11e-10!180;CL:0000066!2.83e-07!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!8.52e-15!659;UBERON:0000481!5.64e-14!347;UBERON:0004119!1.36e-12!169;UBERON:0000925!1.36e-12!169;UBERON:0006595!1.36e-12!169;UBERON:0000475!1.38e-12!365;UBERON:0000467!1.25e-11!625;UBERON:0000480!2.28e-11!626;UBERON:0001007!3.18e-11!155;UBERON:0001555!3.18e-11!155;UBERON:0007026!3.18e-11!155;UBERON:0003104!1.15e-10!238;UBERON:0009142!1.15e-10!238;UBERON:0000119!3.00e-10!312;UBERON:0000064!4.62e-10!219;UBERON:0000483!4.62e-10!309;UBERON:0000077!1.46e-09!130;UBERON:0003102!5.46e-09!95;UBERON:0000477!5.99e-09!286;UBERON:0000922!1.15e-08!612;UBERON:0004921!1.77e-08!129;UBERON:0004185!1.77e-08!129;UBERON:0002100!2.18e-08!216;UBERON:0002050!6.89e-08!605;UBERON:0005423!6.89e-08!605;UBERON:0000923!1.30e-07!604;UBERON:0005291!1.30e-07!604;UBERON:0006598!1.30e-07!604;UBERON:0002532!1.30e-07!604;UBERON:0001048!7.75e-07!168;UBERON:0005256!9.38e-07!143 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.78e-12,160;UBERON:0000925,1.78e-12,160;UBERON:0006595,1.78e-12,160;UBERON:0001007,4.91e-11,145;UBERON:0001555,4.91e-11,145;UBERON:0007026,4.91e-11,145;UBERON:0004921,1.28e-08,118;UBERON:0003102,2.34e-07,99;UBERON:0000119,8.77e-07,309;UBERON:0000483,9.92e-07,306 | |||
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| |||
|short_description=p3@EMP2 | |||
}} |
Revision as of 09:09, 11 September 2013
Short description: | p3@EMP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_EMP2_5end |
Coexpression cluster: | NA |
Association with transcript: | -7bp_to_ENST00000342147_5end |
EntrezGene: | EMP2 |
HGNC: | 3334 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.78e-12 | 160 |
endoderm | 1.78e-12 | 160 |
presumptive endoderm | 1.78e-12 | 160 |
digestive system | 4.91e-11 | 145 |
digestive tract | 4.91e-11 | 145 |
primitive gut | 4.91e-11 | 145 |
subdivision of digestive tract | 1.28e-08 | 118 |
surface structure | 2.34e-07 | 99 |
cell layer | 8.77e-07 | 309 |
epithelium | 9.92e-07 | 306 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.