FFCP PHASE1:Hg19::chr16:29675010..29675041,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6693|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=11249|TSSclassifier=S|UniProt=|association_with_transcript=-8bp_to_AB464706,DQ892262,DQ895464_5end|description=CAGE_peak_5_at_SPN_5end|id=chr16:29675010..29675041,+|ontology_enrichment_celltype=CL:0000037!6.50e-62!172;CL:0000566!6.50e-62!172;CL:0000988!3.25e-58!182;CL:0002032!8.18e-56!165;CL:0000837!8.18e-56!165;CL:0000763!1.39e-46!112;CL:0000049!1.39e-46!112;CL:0002031!2.23e-27!124;CL:0000738!3.28e-27!140;CL:0002087!1.74e-22!119;CL:0000557!1.79e-18!71;CL:0000839!1.06e-17!70;CL:0000134!4.22e-15!358;CL:0002320!2.59e-14!365;CL:0000766!3.37e-14!76;CL:0002009!2.73e-13!65;CL:0000219!4.84e-12!390;CL:0002194!8.19e-12!63;CL:0000576!8.19e-12!63;CL:0000040!8.19e-12!63;CL:0000559!8.19e-12!63;CL:0002057!4.05e-09!42;CL:0000542!4.82e-09!53;CL:0000051!4.82e-09!53;CL:0000034!6.26e-09!444;CL:0000838!1.71e-08!52;CL:0000048!2.01e-08!430;CL:0000860!3.76e-08!45;CL:0000723!5.45e-08!436;CL:0002274!5.64e-08!5;CL:0000457!5.64e-08!5;CL:0002191!5.64e-08!5;CL:0000097!5.64e-08!5;CL:0000831!5.64e-08!5;CL:0002028!5.64e-08!5;CL:0000084!1.91e-07!25;CL:0000827!1.91e-07!25;CL:0002393!5.06e-07!9;CL:0002397!5.06e-07!9|ontology_enrichment_celltype_v019=CL:0000763;6.03e-14;100!CL:0000840;6.12e-11;5!CL:0000990;2.56e-07;8|ontology_enrichment_celltype_v019_2=CL:0000763,3.11e-44,108;CL:0000049,3.11e-44,108;CL:0000037,1.30e-34,168;CL:0000988,2.07e-32,177;CL:0002032,2.18e-32,161;CL:0000837,2.18e-32,161;CL:0000134,9.53e-12,354;CL:0002320,2.41e-11,361;CL:0000840,3.90e-11,5;CL:0001029,3.90e-11,5;CL:0000034,5.97e-10,441;CL:0000219,6.28e-10,386;CL:0000048,3.37e-08,427;CL:0000723,5.83e-08,433;CL:0000990,1.91e-07,8|ontology_enrichment_development_v019=CL:0000049;3.83e-14;108|ontology_enrichment_disease=DOID:1240!1.66e-49!39;DOID:8692!7.32e-44!31;DOID:2531!2.56e-43!51;DOID:0060083!2.56e-43!51;DOID:1036!7.89e-13!8;DOID:0050686!1.55e-09!137|ontology_enrichment_disease_v019=DOID:8692;6.81e-90;31!DOID:1240;6.18e-67;39!DOID:2531;1.39e-44;51!DOID:0060083;1.39e-44;51!DOID:1036;3.91e-24;8!DOID:0050686;5.90e-07;137|ontology_enrichment_disease_v019_2=DOID:8692,2.30e-93,31;DOID:1240,5.25e-84,39;DOID:2531,3.59e-67,51;DOID:0060083,3.59e-67,51;DOID:1036,3.07e-24,8;DOID:0050686,2.85e-20,137;DOID:162,5.72e-09,235;DOID:14566,1.21e-08,239|ontology_enrichment_uberon=UBERON:0002390!4.93e-24!102;UBERON:0003061!4.93e-24!102;UBERON:0002193!1.98e-21!112;UBERON:0002371!2.00e-16!80;UBERON:0001474!1.68e-14!86;UBERON:0002384!3.02e-13!375;UBERON:0002405!4.21e-13!115;UBERON:0004765!9.17e-11!101;UBERON:0001434!9.17e-11!101|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.51e-11,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.328402357799783,0.393553906568396,0,0.383829398097213,0,0,0,0,0,0,10.8632162553893,0,0.401088894940283,0,0,0.32389366601898,0,0.145398238779565,0,0,0,0,0,0.863077176966451,0,0,0,0,0,0.376484679085209,0.545812300115692,0.224723484445085,0.306083892370903,0,0.639337125799041,0,0.199463657621632,0.852449501065388,0.290209238628584,0,0,0.251248665256743,1.0429658368404,0,0,0,0,0.845021145247767,0.425208599930087,0.209658645508376,0.336985893439485,0,0.64290234678832,0.285012743741249,0.79566670879636,0.91332076882317,0,0,0,0,0,0,0,0,0,0,0,11.8954195721123,7.28661131875997,4.21414535640123,0,0,0.411202997999018,0.334372990781356,0,0,0,1.11410456885174,0.294605907474837,0.221533894583621,0.270803863765016,1.0247305578054,0.390178042679635,0.328875809207352,0.276350017785848,0.289803085735052,0.296573126324121,0,0,0.339928028092699,0,0.34362744548263,0.253019692019503,0.318565414324097,0,0,0.451725357233318,0.383959833463255,0,0.236777252044017,0,0,0.534880391567015,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,1.9472843619281,2.08955684759121,1.19662164466979,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0.492663237895943,1.23267807618516,0.621984346622316,0.864719720501769,1.13618190083742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0.224170287987055,0.197030760201927,1.07813787429759,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.877039506583738,1.3071772551245,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,0,0.238231775457789,0,0,0.540031437238115,0,0,0,0,0.185803175125719,0.28853842595289,1.13826949357463,0.318852545457645,8.3823336001783,1.1490322207942,2.328409409962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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6693 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11249 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-8bp_to_AB464706,DQ892262,DQ895464_5end | |||
|description=CAGE_peak_5_at_SPN_5end | |||
|id=chr16:29675010..29675041,+ | |||
|ontology_enrichment_celltype=CL:0000037!6.50e-62!172;CL:0000566!6.50e-62!172;CL:0000988!3.25e-58!182;CL:0002032!8.18e-56!165;CL:0000837!8.18e-56!165;CL:0000763!1.39e-46!112;CL:0000049!1.39e-46!112;CL:0002031!2.23e-27!124;CL:0000738!3.28e-27!140;CL:0002087!1.74e-22!119;CL:0000557!1.79e-18!71;CL:0000839!1.06e-17!70;CL:0000134!4.22e-15!358;CL:0002320!2.59e-14!365;CL:0000766!3.37e-14!76;CL:0002009!2.73e-13!65;CL:0000219!4.84e-12!390;CL:0002194!8.19e-12!63;CL:0000576!8.19e-12!63;CL:0000040!8.19e-12!63;CL:0000559!8.19e-12!63;CL:0002057!4.05e-09!42;CL:0000542!4.82e-09!53;CL:0000051!4.82e-09!53;CL:0000034!6.26e-09!444;CL:0000838!1.71e-08!52;CL:0000048!2.01e-08!430;CL:0000860!3.76e-08!45;CL:0000723!5.45e-08!436;CL:0002274!5.64e-08!5;CL:0000457!5.64e-08!5;CL:0002191!5.64e-08!5;CL:0000097!5.64e-08!5;CL:0000831!5.64e-08!5;CL:0002028!5.64e-08!5;CL:0000084!1.91e-07!25;CL:0000827!1.91e-07!25;CL:0002393!5.06e-07!9;CL:0002397!5.06e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000763;6.03e-14;100!CL:0000840;6.12e-11;5!CL:0000990;2.56e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,3.11e-44,108;CL:0000049,3.11e-44,108;CL:0000037,1.30e-34,168;CL:0000988,2.07e-32,177;CL:0002032,2.18e-32,161;CL:0000837,2.18e-32,161;CL:0000134,9.53e-12,354;CL:0002320,2.41e-11,361;CL:0000840,3.90e-11,5;CL:0001029,3.90e-11,5;CL:0000034,5.97e-10,441;CL:0000219,6.28e-10,386;CL:0000048,3.37e-08,427;CL:0000723,5.83e-08,433;CL:0000990,1.91e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000049;3.83e-14;108 | |||
|ontology_enrichment_disease=DOID:1240!1.66e-49!39;DOID:8692!7.32e-44!31;DOID:2531!2.56e-43!51;DOID:0060083!2.56e-43!51;DOID:1036!7.89e-13!8;DOID:0050686!1.55e-09!137 | |||
|ontology_enrichment_disease_v019=DOID:8692;6.81e-90;31!DOID:1240;6.18e-67;39!DOID:2531;1.39e-44;51!DOID:0060083;1.39e-44;51!DOID:1036;3.91e-24;8!DOID:0050686;5.90e-07;137 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.30e-93,31;DOID:1240,5.25e-84,39;DOID:2531,3.59e-67,51;DOID:0060083,3.59e-67,51;DOID:1036,3.07e-24,8;DOID:0050686,2.85e-20,137;DOID:162,5.72e-09,235;DOID:14566,1.21e-08,239 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.93e-24!102;UBERON:0003061!4.93e-24!102;UBERON:0002193!1.98e-21!112;UBERON:0002371!2.00e-16!80;UBERON:0001474!1.68e-14!86;UBERON:0002384!3.02e-13!375;UBERON:0002405!4.21e-13!115;UBERON:0004765!9.17e-11!101;UBERON:0001434!9.17e-11!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.51e-11,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.328402357799783,0.393553906568396,0,0.383829398097213,0,0,0,0,0,0,10.8632162553893,0,0.401088894940283,0,0,0.32389366601898,0,0.145398238779565,0,0,0,0,0,0.863077176966451,0,0,0,0,0,0.376484679085209,0.545812300115692,0.224723484445085,0.306083892370903,0,0.639337125799041,0,0.199463657621632,0.852449501065388,0.290209238628584,0,0,0.251248665256743,1.0429658368404,0,0,0,0,0.845021145247767,0.425208599930087,0.209658645508376,0.336985893439485,0,0.64290234678832,0.285012743741249,0.79566670879636,0.91332076882317,0,0,0,0,0,0,0,0,0,0,0,11.8954195721123,7.28661131875997,4.21414535640123,0,0,0.411202997999018,0.334372990781356,0,0,0,1.11410456885174,0.294605907474837,0.221533894583621,0.270803863765016,1.0247305578054,0.390178042679635,0.328875809207352,0.276350017785848,0.289803085735052,0.296573126324121,0,0,0.339928028092699,0,0.34362744548263,0.253019692019503,0.318565414324097,0,0,0.451725357233318,0.383959833463255,0,0.236777252044017,0,0,0.534880391567015,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,1.9472843619281,2.08955684759121,1.19662164466979,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0.492663237895943,1.23267807618516,0.621984346622316,0.864719720501769,1.13618190083742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0.224170287987055,0.197030760201927,1.07813787429759,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.877039506583738,1.3071772551245,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,0,0.238231775457789,0,0,0.540031437238115,0,0,0,0,0.185803175125719,0.28853842595289,1.13826949357463,0.318852545457645,8.3823336001783,1.1490322207942,2.32840940996271,2.59697552219644,4.7735520279288,6.61880569196257,3.91699739432558,5.01268954180134,0.50787533340481,8.51116798049608,4.03599414382095,0,2.74804275804612,1.22896305723383,0.671028323677248,1.00109485027145,1.75849285861836,3.89768643453339,3.69262196843137,2.16364542780786,15.9874544638954,12.6888304579065,0,0,0,0.222886768554957,0,0,0,0,0.994147647766298,0,0,0,0,0,0.276283915531148,0,0,0.246169610922139,0,0,0,2.04628948090749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,3.29658538429552,7.14710232170673,1.1279783030859,0.784250137270958,1.51039428278258,1.51802986179348,8.58257526494045,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,1.27746588066972,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.338693328263138,0,0.136203406111576,0,0,0,0.2249738915515,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64185041498678,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0.19998739585493,11.4160150772731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.257831551894309,0.499705779624645,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0.452122368852043,0.372448285775147,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p5@SPN | |||
}} |
Revision as of 10:00, 11 September 2013
Short description: | p5@SPN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_SPN_5end |
Coexpression cluster: | NA |
Association with transcript: | -8bp_to_AB464706, DQ892262, DQ895464_5end |
EntrezGene: | SPN |
HGNC: | 11249 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 3.11e-44 | 108 |
common myeloid progenitor | 3.11e-44 | 108 |
hematopoietic stem cell | 1.30e-34 | 168 |
hematopoietic cell | 2.07e-32 | 177 |
hematopoietic oligopotent progenitor cell | 2.18e-32 | 161 |
hematopoietic multipotent progenitor cell | 2.18e-32 | 161 |
mesenchymal cell | 9.53e-12 | 354 |
connective tissue cell | 2.41e-11 | 361 |
immature conventional dendritic cell | 3.90e-11 | 5 |
common dendritic progenitor | 3.90e-11 | 5 |
stem cell | 5.97e-10 | 441 |
motile cell | 6.28e-10 | 386 |
multi fate stem cell | 3.37e-08 | 427 |
somatic stem cell | 5.83e-08 | 433 |
conventional dendritic cell | 1.91e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 8.51e-11 | 371 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.30e-93 | 31 |
leukemia | 5.25e-84 | 39 |
hematologic cancer | 3.59e-67 | 51 |
immune system cancer | 3.59e-67 | 51 |
chronic leukemia | 3.07e-24 | 8 |
organ system cancer | 2.85e-20 | 137 |
cancer | 5.72e-09 | 235 |
disease of cellular proliferation | 1.21e-08 | 239 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.