FFCP PHASE1:Hg19::chr17:40912841..40912865,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10266|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9844|TSSclassifier=W|UniProt=O60895|association_with_transcript=-346bp_to_ENST00000253796,NM_005854,uc002ibg.2,uc002ibh.2,uc010cyt.2_5end|description=CAGE_peak_7_at_RAMP2_5end|id=chr17:40912841..40912865,+|ontology_enrichment_celltype=CL:0000540!1.76e-08!6;CL:0000031!1.76e-08!6;CL:0000404!1.76e-08!6;CL:0000047!2.54e-08!8;CL:0002322!1.11e-07!5;CL:0000136!9.35e-07!15|ontology_enrichment_celltype_v019=CL:0002321;2.11e-22;15!CL:0000333;9.51e-19;5!CL:0002322;1.19e-17;5!CL:0000540;1.13e-14;6!CL:0000404;1.13e-14;6!CL:0002319;3.24e-07;25|ontology_enrichment_celltype_v019_2=CL:0002322,6.15e-18,5;CL:0000047,1.52e-15,8;CL:0000540,1.56e-14,6;CL:0000031,1.56e-14,6;CL:0000404,1.56e-14,6;CL:0000133,2.26e-11,59;CL:0000221,1.01e-08,72;CL:0002319,3.66e-07,25|ontology_enrichment_development_v019=CL:0000031;1.13e-14;6|ontology_enrichment_disease=DOID:3095!9.25e-14!22;DOID:2994!9.25e-14!22;DOID:171!9.64e-11!10|ontology_enrichment_disease_v019=DOID:171;3.08e-22;10!DOID:3095;3.88e-21;22!DOID:2994;3.88e-21;22!DOID:169;1.44e-15;6|ontology_enrichment_disease_v019_2=DOID:171,2.81e-22,10;DOID:3095,2.80e-21,22;DOID:2994,2.80e-21,22;DOID:169,1.14e-15,6|ontology_enrichment_uberon=UBERON:0000073!3.34e-12!94;UBERON:0001016!3.34e-12!94;UBERON:0005743!6.89e-10!86;UBERON:0001017!3.12e-09!82;UBERON:0000013!4.95e-08!5;UBERON:0002410!4.95e-08!5;UBERON:0007023!6.74e-08!115;UBERON:0000924!7.13e-08!173;UBERON:0006601!7.13e-08!173;UBERON:0002346!8.77e-07!90|ontology_enrichment_uberon_v019=UBERON:0000013;9.51e-19;5!UBERON:0002410;9.51e-19;5!UBERON:0000922;3.39e-18;49!UBERON:0002050;1.58e-11;5!UBERON:0005423;1.58e-11;5!UBERON:0000010;2.96e-10;8!UBERON:0002346;1.81e-08;4!UBERON:0000923;1.81e-08;4!UBERON:0010316;1.81e-08;4!UBERON:0005291;1.81e-08;4|ontology_enrichment_uberon_v019_2=UBERON:0000013,7.16e-19,5;UBERON:0002410,7.16e-19,5;UBERON:0000010,2.54e-10,8;UBERON:0001016,2.40e-09,89|phase1_expression=0,0.214100523890983,0.281908808191942,0,0.893922188854576,0,5.06599756336621,0.631719873426831,1.30592814099919,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0.24406205754817,0,0,0.357198913136319,0,0.563057402416611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31750041646231,1.85541675650079,2.67246068599892,1.7622379352613,6.05570042101508,4.37972830890996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0.4115740113314,1.47008711385542,0,0,0,0,0.737930631258681,0,0,0,0,0,0,0,0,0.34779121492523,0,0.288732895522148,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0.845302752556,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.90419561572865,0.773288812777695,3.51784157202132,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,1.0877350463246,0,0,0,0,0,0.451199612907412,0,0.784349769176855,0,0,0,0,0,1.54227252690289,0,1.00337954770971,0,0,0,0,0,0,0,0.650756789328606,0,0,0,0,0,0,0,0.308097234229289,0.460511024178389,0.137836572484531,0.107420244868274,0.145016693914229,0.0852266274161009,0.534192213880424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61158997199083,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0077309914171,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,3.99227596002388,0,0,0,0,0,0,0.689486746482929,0,1.56262495439963,0,0,0,0,0,0.219385397153973,0,0,0.153900517007594,0,0,0.0897576444097721,0.217294743844016,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27217764290547,0.216388639742091,0,0.796118080530053,1.22206028986725,0,0,0,0,0.802577647298789,0,0,0,0,0,1.20990716048664,2.75465485467441,0.884612114798832,0,0,0,0,0,0,3.13070500632772,0,0,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,2.25980740780532,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,2.74551996579143,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.458320848023367,0,0,0,0,0.134366944973453,0,1.16495949527454,0.393915911536118,0,0.202210631562555,0,0,0.795229689809303,0.136203406111576,1.44677833618517,2.06309154895851,3.32352270423348,0,0,0.182248669974074,0,0.157611414598396,0.891727998294968,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0.13223260174269,0,0,0.106787412567695,0.314408610199332,0.414239055347196,0.496166021811951,0,0,0,0.544017803369474,0.752069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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10266 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9844 | |||
|TSSclassifier=W | |||
|UniProt=O60895 | |||
|association_with_transcript=-346bp_to_ENST00000253796,NM_005854,uc002ibg.2,uc002ibh.2,uc010cyt.2_5end | |||
|description=CAGE_peak_7_at_RAMP2_5end | |||
|id=chr17:40912841..40912865,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.76e-08!6;CL:0000031!1.76e-08!6;CL:0000404!1.76e-08!6;CL:0000047!2.54e-08!8;CL:0002322!1.11e-07!5;CL:0000136!9.35e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0002321;2.11e-22;15!CL:0000333;9.51e-19;5!CL:0002322;1.19e-17;5!CL:0000540;1.13e-14;6!CL:0000404;1.13e-14;6!CL:0002319;3.24e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,6.15e-18,5;CL:0000047,1.52e-15,8;CL:0000540,1.56e-14,6;CL:0000031,1.56e-14,6;CL:0000404,1.56e-14,6;CL:0000133,2.26e-11,59;CL:0000221,1.01e-08,72;CL:0002319,3.66e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000031;1.13e-14;6 | |||
|ontology_enrichment_disease=DOID:3095!9.25e-14!22;DOID:2994!9.25e-14!22;DOID:171!9.64e-11!10 | |||
|ontology_enrichment_disease_v019=DOID:171;3.08e-22;10!DOID:3095;3.88e-21;22!DOID:2994;3.88e-21;22!DOID:169;1.44e-15;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.81e-22,10;DOID:3095,2.80e-21,22;DOID:2994,2.80e-21,22;DOID:169,1.14e-15,6 | |||
|ontology_enrichment_uberon=UBERON:0000073!3.34e-12!94;UBERON:0001016!3.34e-12!94;UBERON:0005743!6.89e-10!86;UBERON:0001017!3.12e-09!82;UBERON:0000013!4.95e-08!5;UBERON:0002410!4.95e-08!5;UBERON:0007023!6.74e-08!115;UBERON:0000924!7.13e-08!173;UBERON:0006601!7.13e-08!173;UBERON:0002346!8.77e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;9.51e-19;5!UBERON:0002410;9.51e-19;5!UBERON:0000922;3.39e-18;49!UBERON:0002050;1.58e-11;5!UBERON:0005423;1.58e-11;5!UBERON:0000010;2.96e-10;8!UBERON:0002346;1.81e-08;4!UBERON:0000923;1.81e-08;4!UBERON:0010316;1.81e-08;4!UBERON:0005291;1.81e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,7.16e-19,5;UBERON:0002410,7.16e-19,5;UBERON:0000010,2.54e-10,8;UBERON:0001016,2.40e-09,89 | |||
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|short_description=p7@RAMP2 | |||
}} |
Revision as of 13:46, 11 September 2013
Short description: | p7@RAMP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_RAMP2_5end |
Coexpression cluster: | NA |
Association with transcript: | -346bp_to_ENST00000253796, NM_005854, uc002ibg.2, uc002ibh.2, uc010cyt.2_5end |
EntrezGene: | RAMP2 |
HGNC: | 9844 |
UniProt: | O60895 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 6.15e-18 | 5 |
neuronal stem cell | 1.52e-15 | 8 |
neuron | 1.56e-14 | 6 |
neuroblast | 1.56e-14 | 6 |
electrically signaling cell | 1.56e-14 | 6 |
neurectodermal cell | 2.26e-11 | 59 |
ectodermal cell | 1.01e-08 | 72 |
neural cell | 3.66e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 7.16e-19 | 5 |
autonomic nervous system | 7.16e-19 | 5 |
peripheral nervous system | 2.54e-10 | 8 |
nervous system | 2.40e-09 | 89 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.81e-22 | 10 |
germ cell and embryonal cancer | 2.80e-21 | 22 |
germ cell cancer | 2.80e-21 | 22 |
neuroendocrine tumor | 1.14e-15 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.