FFCP PHASE1:Hg19::chr17:62541831..62541835,-: Difference between revisions
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{{FFCP | 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8288,2.11736923029415,0.481448200135009,0,0.458729283404541,1.00337708206016,0.631086248772738,0,0.436350690340377,0,1.11598505450025,1.84870251452567,3.02838593486652,0.504665699340316,0.218531143927391,0.633492505057185,0.101988829741982,0.26721740526556,0,1.25353769646188,0.682008283964155,0.803892390468535,0,0.103432995861895,0,1.1903221573187,0.193766729508018,0.248298857183432,2.35476911419288,0.572824424503484,0.202117188958219,0,0.684466602170562,0.0673520530145875,0.358611026963382,0.99798106963804,0.651226148887796,2.02781957167659,0,1.61685363791856,0,0.366724332548599,2.03448089157869,0,0.603821380773079,0.320568492303233|short_description=p3@SMURF2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=64750 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=16809 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-288bp_to_AK002019_5end | |||
|description=CAGE_peak_3_at_SMURF2_5end | |||
|id=chr17:62541831..62541835,- | |||
|ontology_enrichment_celltype=CL:0000220!1.02e-12!246;CL:0002321!1.11e-12!248;CL:0000222!3.61e-11!119;CL:0000548!1.65e-10!679;CL:0000004!1.65e-10!679;CL:0000255!1.65e-10!679;CL:0000055!2.44e-10!180;CL:0000012!9.50e-10!682;CL:0000359!2.91e-09!32;CL:0000680!5.00e-08!57;CL:0000056!5.00e-08!57;CL:0000355!5.00e-08!57;CL:0000192!1.35e-07!42;CL:0000514!1.35e-07!42;CL:0000187!3.15e-07!54;CL:0000393!5.00e-07!60;CL:0000211!5.00e-07!60;CL:0000003!8.02e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.22e-11;32!CL:0000192;5.38e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,5.51e-16,121;CL:0000359,2.78e-12,32;CL:0002321,1.06e-11,250;CL:0000192,1.10e-09,43;CL:0000514,1.10e-09,43;CL:0000680,1.05e-08,58;CL:0000056,1.05e-08,58;CL:0000355,1.05e-08,58;CL:0000213,4.40e-08,58;CL:0000215,4.40e-08,58;CL:0000187,4.52e-08,55 | |||
|ontology_enrichment_development_v019=CL:0000514;5.38e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;7.80e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.31e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0001637!8.81e-13!42;UBERON:0003509!8.81e-13!42;UBERON:0004572!8.81e-13!42;UBERON:0001981!2.99e-12!60;UBERON:0007500!2.99e-12!60;UBERON:0004537!2.99e-12!60;UBERON:0006965!2.99e-12!60;UBERON:0000055!7.32e-12!69;UBERON:0002049!4.11e-11!79;UBERON:0007798!4.11e-11!79;UBERON:0004573!1.63e-09!33;UBERON:0004571!1.63e-09!33;UBERON:0000486!6.12e-09!82;UBERON:0000490!4.96e-08!138;UBERON:0000914!8.05e-08!83;UBERON:0002329!8.05e-08!83;UBERON:0003077!8.05e-08!83;UBERON:0003059!8.05e-08!83;UBERON:0007282!8.05e-08!83;UBERON:0009618!8.05e-08!83;UBERON:0007285!8.05e-08!83;UBERON:0004872!1.26e-07!84;UBERON:0000947!3.24e-07!21;UBERON:0010191!3.24e-07!21;UBERON:0004290!6.65e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.58e-13;42!UBERON:0003509;1.58e-13;42!UBERON:0004572;1.58e-13;42!UBERON:0004573;1.72e-12;33!UBERON:0004571;1.72e-12;33!UBERON:0000947;1.23e-09;21!UBERON:0010191;1.23e-09;21!UBERON:0007500;2.45e-09;56!UBERON:0001981;2.45e-09;56!UBERON:0004537;2.45e-09;56!UBERON:0002049;1.09e-07;75!UBERON:0007798;1.09e-07;75!UBERON:0000055;1.60e-07;65!UBERON:0006914;1.69e-07;25!UBERON:0003914;6.99e-07;74!UBERON:0000487;8.31e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.21e-18,42;UBERON:0003509,1.21e-18,42;UBERON:0004572,1.21e-18,42;UBERON:0007500,9.43e-17,59;UBERON:0001981,9.43e-17,59;UBERON:0004537,9.43e-17,59;UBERON:0006965,9.43e-17,59;UBERON:0000055,2.63e-16,68;UBERON:0002049,1.94e-14,78;UBERON:0007798,1.94e-14,78;UBERON:0004573,4.43e-14,33;UBERON:0004571,4.43e-14,33;UBERON:0004872,4.13e-12,83;UBERON:0000947,8.17e-10,21;UBERON:0010191,8.17e-10,21;UBERON:0004535,1.11e-09,109;UBERON:0000486,1.52e-09,83;UBERON:0000490,3.95e-09,148;UBERON:0001009,5.08e-09,112;UBERON:0003914,3.87e-08,117;UBERON:0007524,7.83e-08,73;UBERON:0002329,1.47e-07,71;UBERON:0003059,1.47e-07,71;UBERON:0007282,1.47e-07,71;UBERON:0004290,1.47e-07,71;UBERON:0009618,1.47e-07,71;UBERON:0001134,1.57e-07,62;UBERON:0002036,1.57e-07,62;UBERON:0003082,1.57e-07,62;UBERON:0006914,1.57e-07,25;UBERON:0003077,2.57e-07,72;UBERON:0007285,2.57e-07,72;UBERON:0007503,4.18e-07,78;UBERON:0002385,5.21e-07,64;UBERON:0001015,5.21e-07,64;UBERON:0000383,5.21e-07,64;UBERON:0000487,7.20e-07,22;UBERON:0000926,9.72e-07,315;UBERON:0004120,9.72e-07,315;UBERON:0006603,9.72e-07,315 | |||
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| |||
|short_description=p3@SMURF2 | |||
}} |
Revision as of 15:04, 11 September 2013
Short description: | p3@SMURF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SMURF2_5end |
Coexpression cluster: | NA |
Association with transcript: | -288bp_to_AK002019_5end |
EntrezGene: | SMURF2 |
HGNC: | 16809 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 5.51e-16 | 121 |
vascular associated smooth muscle cell | 2.78e-12 | 32 |
embryonic cell | 1.06e-11 | 250 |
smooth muscle cell | 1.10e-09 | 43 |
smooth muscle myoblast | 1.10e-09 | 43 |
muscle precursor cell | 1.05e-08 | 58 |
myoblast | 1.05e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.05e-08 | 58 |
lining cell | 4.40e-08 | 58 |
barrier cell | 4.40e-08 | 58 |
muscle cell | 4.52e-08 | 55 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.31e-08 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.