FFCP PHASE1:Hg19::chr17:67138066..67138082,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23460|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=36|TSSclassifier=S|UniProt=Q8N139|association_with_transcript=-51bp_to_ENST00000284425,NM_080284,uc002jhw.1,uc002jhy.2_5end|coexpression_cluster_id=C2432|description=CAGE_peak_2_at_ABCA6_5end|id=chr17:67138066..67138082,-|ontology_enrichment_celltype=CL:0002494!6.44e-07!16|ontology_enrichment_celltype_v019=CL:0002595;1.13e-07;5|ontology_enrichment_celltype_v019_2=CL:0002595,1.20e-07,5|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:2394;8.91e-07;14|ontology_enrichment_disease_v019_2=DOID:2394,8.78e-07,14|ontology_enrichment_uberon=UBERON:0007023!4.34e-32!115;UBERON:0004111!1.28e-22!241;UBERON:0000477!1.50e-21!286;UBERON:0000025!1.09e-19!194;UBERON:0004872!1.67e-18!84;UBERON:0001009!2.83e-17!113;UBERON:0004535!9.50e-16!110;UBERON:0000483!1.46e-15!309;UBERON:0000119!5.22e-15!312;UBERON:0003914!9.81e-14!118;UBERON:0000055!2.03e-13!69;UBERON:0007100!5.21e-13!27;UBERON:0002049!1.22e-12!79;UBERON:0007798!1.22e-12!79;UBERON:0001981!1.50e-12!60;UBERON:0007500!1.50e-12!60;UBERON:0004537!1.50e-12!60;UBERON:0006965!1.50e-12!60;UBERON:0004573!3.19e-12!33;UBERON:0004571!3.19e-12!33;UBERON:0000468!1.14e-11!659;UBERON:0000948!4.44e-11!24;UBERON:0005498!4.44e-11!24;UBERON:0004140!4.44e-11!24;UBERON:0009881!4.44e-11!24;UBERON:0004141!4.44e-11!24;UBERON:0003084!4.44e-11!24;UBERON:0007005!4.44e-11!24;UBERON:0004139!4.44e-11!24;UBERON:0004291!4.44e-11!24;UBERON:0001637!5.38e-11!42;UBERON:0003509!5.38e-11!42;UBERON:0004572!5.38e-11!42;UBERON:0000467!2.06e-10!625;UBERON:0000480!2.71e-10!626;UBERON:0000475!1.09e-09!365;UBERON:0000481!4.85e-09!347;UBERON:0001049!5.54e-09!57;UBERON:0005068!5.54e-09!57;UBERON:0006241!5.54e-09!57;UBERON:0007135!5.54e-09!57;UBERON:0002616!9.58e-09!59;UBERON:0003080!7.89e-08!42;UBERON:0000490!9.41e-08!138;UBERON:0000922!1.09e-07!612;UBERON:0002050!1.23e-07!605;UBERON:0005423!1.23e-07!605;UBERON:0000923!1.88e-07!604;UBERON:0005291!1.88e-07!604;UBERON:0006598!1.88e-07!604;UBERON:0002532!1.88e-07!604;UBERON:0002780!2.59e-07!41;UBERON:0001890!2.59e-07!41;UBERON:0006240!2.59e-07!41;UBERON:0002385!3.31e-07!63;UBERON:0001015!3.31e-07!63;UBERON:0000383!3.31e-07!63;UBERON:0004290!5.15e-07!70;UBERON:0000947!8.78e-07!21;UBERON:0010191!8.78e-07!21|ontology_enrichment_uberon_v019=UBERON:0007100;5.01e-15;25!UBERON:0000948;7.24e-12;22!UBERON:0004573;7.32e-12;33!UBERON:0004571;7.32e-12;33!UBERON:0001637;5.52e-08;42!UBERON:0003509;5.52e-08;42!UBERON:0004572;5.52e-08;42!UBERON:0003834;1.13e-07;5!UBERON:0001533;1.13e-07;5!UBERON:0000947;2.40e-07;21!UBERON:0010191;2.40e-07;21|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.36e-23,114;UBERON:0004872,1.88e-17,83;UBERON:0004111,8.57e-16,240;UBERON:0000025,1.79e-15,192;UBERON:0001009,1.93e-15,112;UBERON:0003914,4.37e-14,117;UBERON:0007100,1.53e-13,27;UBERON:0004535,1.86e-13,109;UBERON:0004573,1.09e-12,33;UBERON:0004571,1.09e-12,33;UBERON:0007500,3.65e-11,59;UBERON:0001981,3.65e-11,59;UBERON:0004537,3.65e-11,59;UBERON:0006965,3.65e-11,59;UBERON:0004797,1.14e-10,7;UBERON:0000948,1.22e-10,24;UBERON:0005498,1.22e-10,24;UBERON:0004140,1.22e-10,24;UBERON:0009881,1.22e-10,24;UBERON:0004141,1.22e-10,24;UBERON:0003084,1.22e-10,24;UBERON:0007005,1.22e-10,24;UBERON:0004139,1.22e-10,24;UBERON:0004291,1.22e-10,24;UBERON:0000055,2.87e-10,68;UBERON:0000483,6.47e-10,306;UBERON:0001637,7.06e-10,42;UBERON:0003509,7.06e-10,42;UBERON:0004572,7.06e-10,42;UBERON:0000119,1.24e-09,309;UBERON:0002049,1.61e-09,78;UBERON:0007798,1.61e-09,78;UBERON:0003834,1.20e-07,5;UBERON:0001533,1.20e-07,5;UBERON:0000947,3.53e-07,21;UBERON:0010191,3.53e-07,21;UBERON:0003103,3.90e-07,68;UBERON:0000923,5.00e-07,560;UBERON:0010316,5.00e-07,560;UBERON:0005291,5.00e-07,560;UBERON:0006598,5.00e-07,560;UBERON:0010317,5.00e-07,560;UBERON:0002532,5.00e-07,560;UBERON:0002050,8.58e-07,564|phase1_expression=1.45342703416445,0.214100523890983,2.53717927372748,1.0007329835313,0.446961094427288,1.74467704820074,0,1.26343974685366,1.30592814099919,0,0,0,0,0,0,1.34465029290355,1.20538905604795,1.46062018077475,1.95173119516203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,39.0090986102339,9.38981203585091,0.767175371061182,0,0,0.144846518960824,0,0,0,0,0,0.654895377488563,0,0,0,0,0.930705723632056,0,0,0,0.993812036833525,0.860234595106124,0.347140501607594,0.56530794192401,1.67799774483962,0,0.626984899610432,0.516833518338658,1.06729878806013,1.00416183829401,0.402829317109147,0,0.24406205754817,1.10298924103761,1.62028389576352,3.30408994651095,2.91888184414021,0.450445921933289,0,0,0.183201743930407,0,0,0,0.496971951695318,1.2663051166458,7.54732330635347,6.02356903572509,1.06400514659507,0,0,0.74000264525148,8.40269795579369,5.52313755485721,4.57693328717684,2.1190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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23460 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=36 | |||
|TSSclassifier=S | |||
|UniProt=Q8N139 | |||
|association_with_transcript=-51bp_to_ENST00000284425,NM_080284,uc002jhw.1,uc002jhy.2_5end | |||
|coexpression_cluster_id=C2432 | |||
|description=CAGE_peak_2_at_ABCA6_5end | |||
|id=chr17:67138066..67138082,- | |||
|ontology_enrichment_celltype=CL:0002494!6.44e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0002595;1.13e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002595,1.20e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;8.91e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,8.78e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.34e-32!115;UBERON:0004111!1.28e-22!241;UBERON:0000477!1.50e-21!286;UBERON:0000025!1.09e-19!194;UBERON:0004872!1.67e-18!84;UBERON:0001009!2.83e-17!113;UBERON:0004535!9.50e-16!110;UBERON:0000483!1.46e-15!309;UBERON:0000119!5.22e-15!312;UBERON:0003914!9.81e-14!118;UBERON:0000055!2.03e-13!69;UBERON:0007100!5.21e-13!27;UBERON:0002049!1.22e-12!79;UBERON:0007798!1.22e-12!79;UBERON:0001981!1.50e-12!60;UBERON:0007500!1.50e-12!60;UBERON:0004537!1.50e-12!60;UBERON:0006965!1.50e-12!60;UBERON:0004573!3.19e-12!33;UBERON:0004571!3.19e-12!33;UBERON:0000468!1.14e-11!659;UBERON:0000948!4.44e-11!24;UBERON:0005498!4.44e-11!24;UBERON:0004140!4.44e-11!24;UBERON:0009881!4.44e-11!24;UBERON:0004141!4.44e-11!24;UBERON:0003084!4.44e-11!24;UBERON:0007005!4.44e-11!24;UBERON:0004139!4.44e-11!24;UBERON:0004291!4.44e-11!24;UBERON:0001637!5.38e-11!42;UBERON:0003509!5.38e-11!42;UBERON:0004572!5.38e-11!42;UBERON:0000467!2.06e-10!625;UBERON:0000480!2.71e-10!626;UBERON:0000475!1.09e-09!365;UBERON:0000481!4.85e-09!347;UBERON:0001049!5.54e-09!57;UBERON:0005068!5.54e-09!57;UBERON:0006241!5.54e-09!57;UBERON:0007135!5.54e-09!57;UBERON:0002616!9.58e-09!59;UBERON:0003080!7.89e-08!42;UBERON:0000490!9.41e-08!138;UBERON:0000922!1.09e-07!612;UBERON:0002050!1.23e-07!605;UBERON:0005423!1.23e-07!605;UBERON:0000923!1.88e-07!604;UBERON:0005291!1.88e-07!604;UBERON:0006598!1.88e-07!604;UBERON:0002532!1.88e-07!604;UBERON:0002780!2.59e-07!41;UBERON:0001890!2.59e-07!41;UBERON:0006240!2.59e-07!41;UBERON:0002385!3.31e-07!63;UBERON:0001015!3.31e-07!63;UBERON:0000383!3.31e-07!63;UBERON:0004290!5.15e-07!70;UBERON:0000947!8.78e-07!21;UBERON:0010191!8.78e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;5.01e-15;25!UBERON:0000948;7.24e-12;22!UBERON:0004573;7.32e-12;33!UBERON:0004571;7.32e-12;33!UBERON:0001637;5.52e-08;42!UBERON:0003509;5.52e-08;42!UBERON:0004572;5.52e-08;42!UBERON:0003834;1.13e-07;5!UBERON:0001533;1.13e-07;5!UBERON:0000947;2.40e-07;21!UBERON:0010191;2.40e-07;21 | |||
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| |||
|short_description=p2@ABCA6 | |||
}} |
Revision as of 15:16, 11 September 2013
Short description: | p2@ABCA6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ABCA6_5end |
Coexpression cluster: | C2432_Cardiac_Hepatocyte_Fibroblast_lung_heart_adipose_liver |
Association with transcript: | -51bp_to_ENST00000284425, NM_080284, uc002jhw.1, uc002jhy.2_5end |
EntrezGene: | ABCA6 |
HGNC: | 36 |
UniProt: | Q8N139 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 1.20e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 8.78e-07 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.