FFCP PHASE1:Hg19::chr17:7991027..7991040,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=242|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=430|TSSclassifier=S|UniProt=O75342|association_with_transcript=-5bp_to_ENST00000319144_5end|coexpression_cluster_id=C197|description=CAGE_peak_1_at_ALOX12B_5end|id=chr17:7991027..7991040,-|ontology_enrichment_celltype=CL:0002159!1.05e-13!13;CL:0002150!1.72e-12!3;CL:0000861!1.72e-12!3;CL:0000240!2.38e-10!6;CL:0000311!2.38e-10!6;CL:0000079!2.38e-10!6;CL:0000237!2.38e-10!6;CL:0000036!2.38e-10!6;CL:0000357!2.38e-10!6;CL:0000114!2.38e-10!6;CL:0001014!1.81e-09!2;CL:0001016!1.81e-09!2;CL:0000575!1.14e-08!2;CL:0002251!3.67e-08!21;CL:0000362!4.37e-08!8;CL:0000622!6.02e-08!5;CL:0000312!1.52e-07!5|ontology_enrichment_celltype_v019=CL:0001014;6.68e-22;2!CL:0001016;6.68e-22;2!CL:0002252;1.25e-11;1!CL:0000622;2.22e-09;5!CL:0000453;2.47e-09;5!CL:0000154;5.84e-08;6!CL:0000840;6.38e-08;5|ontology_enrichment_celltype_v019_2=CL:0001014,4.86e-22,2;CL:0001016,4.86e-22,2;CL:0002252,1.19e-11,1;CL:0000622,1.92e-09,5;CL:0000453,2.17e-09,5;CL:0000154,5.17e-08,6;CL:0000840,5.74e-08,5;CL:0001029,5.74e-08,5|ontology_enrichment_development_v019=UBERON:0004874;7.76e-12;1!UBERON:0008814;8.93e-07;2!UBERON:0010056;8.93e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3151;4.78e-12;1!DOID:3149;4.78e-12;1|ontology_enrichment_disease_v019_2=DOID:3151,5.62e-12,1;DOID:3149,5.62e-12,1|ontology_enrichment_uberon=UBERON:0000166!3.87e-11!21;UBERON:0001042!4.88e-10!10;UBERON:0009145!4.88e-10!10;UBERON:0000165!5.42e-10!28;UBERON:0000930!5.42e-10!28;UBERON:0003408!1.19e-09!10;UBERON:0003102!3.12e-09!95;UBERON:0006562!4.29e-09!11;UBERON:0001444!9.01e-08!48;UBERON:0000161!1.10e-07!35;UBERON:0000078!1.13e-07!18;UBERON:0001004!1.39e-07!72;UBERON:0001557!5.43e-07!19;UBERON:0001003!5.69e-07!14;UBERON:0007376!5.69e-07!14;UBERON:0007383!5.69e-07!14|ontology_enrichment_uberon_v019=UBERON:0001723;2.70e-15;3!UBERON:0001033;2.70e-15;3!UBERON:0007029;2.93e-12;1!UBERON:0005795;4.78e-12;1!UBERON:0002372;6.61e-12;1!UBERON:0001961;6.61e-12;1!UBERON:0001744;6.61e-12;1!UBERON:0001042;6.61e-12;1!UBERON:0001735;6.61e-12;1!UBERON:0000989;7.76e-12;1!UBERON:0008811;7.76e-12;1!UBERON:0000014;9.37e-12;4!UBERON:0000165;2.17e-09;28!UBERON:0000002;4.12e-08;6!UBERON:0001560;4.12e-08;6!UBERON:0001003;7.65e-07;15!UBERON:0007376;7.65e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0001723,2.80e-15,3;UBERON:0001033,2.80e-15,3;UBERON:0010056,2.80e-15,3;UBERON:0007029,2.93e-12,1;UBERON:0000166,6.03e-12,22;UBERON:0002372,6.26e-12,1;UBERON:0001961,6.26e-12,1;UBERON:0001744,6.26e-12,1;UBERON:0001735,6.26e-12,1;UBERON:0000989,7.76e-12,1;UBERON:0008811,7.76e-12,1;UBERON:0006258,7.76e-12,1;UBERON:0005876,7.76e-12,1;UBERON:0004874,7.76e-12,1;UBERON:0000014,1.02e-11,4;UBERON:0001042,3.41e-10,10;UBERON:0009145,3.41e-10,10;UBERON:0006562,2.59e-09,11;UBERON:0000165,4.91e-09,29;UBERON:0000930,4.91e-09,29;UBERON:0000002,3.90e-08,6;UBERON:0001560,3.90e-08,6;UBERON:0003102,1.86e-07,99;UBERON:0000161,3.00e-07,36;UBERON:0001003,7.50e-07,15;UBERON:0007376,7.50e-07,15;UBERON:0007383,7.50e-07,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09098448236334,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,1.1240175325762,0.301586917234893,0.0925884451585296,0,0,0,0,0,0,0,0,1.58040879591855,0.858486162094873,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95018073810956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43050537267123,0,1.7737206141467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67165076416218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945550727071745,0,0,0,0,0,0,0,0,0,0,9.89908584378083,4.92481654424301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685946781900644,0,0,0,0.580537987734511,0.511625219603299,0.492692742319255,0.193978032976839,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.799791132412,4.6428117273477,0,4.02521625119119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617602894321944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97726707033577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0.3414369541879,5.53007729451273,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,10.6856418473011,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0.322944549180031,0.372448285775147,0,0,0,26.5614432434293,3.42233301085281,3.83906702183149,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,4.06896178315738,0,0.201273793591026,0|short_description=p1@ALOX12B}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=242 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=430 | |||
|TSSclassifier=S | |||
|UniProt=O75342 | |||
|association_with_transcript=-5bp_to_ENST00000319144_5end | |||
|coexpression_cluster_id=C197 | |||
|description=CAGE_peak_1_at_ALOX12B_5end | |||
|id=chr17:7991027..7991040,- | |||
|ontology_enrichment_celltype=CL:0002159!1.05e-13!13;CL:0002150!1.72e-12!3;CL:0000861!1.72e-12!3;CL:0000240!2.38e-10!6;CL:0000311!2.38e-10!6;CL:0000079!2.38e-10!6;CL:0000237!2.38e-10!6;CL:0000036!2.38e-10!6;CL:0000357!2.38e-10!6;CL:0000114!2.38e-10!6;CL:0001014!1.81e-09!2;CL:0001016!1.81e-09!2;CL:0000575!1.14e-08!2;CL:0002251!3.67e-08!21;CL:0000362!4.37e-08!8;CL:0000622!6.02e-08!5;CL:0000312!1.52e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0001014;6.68e-22;2!CL:0001016;6.68e-22;2!CL:0002252;1.25e-11;1!CL:0000622;2.22e-09;5!CL:0000453;2.47e-09;5!CL:0000154;5.84e-08;6!CL:0000840;6.38e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,4.86e-22,2;CL:0001016,4.86e-22,2;CL:0002252,1.19e-11,1;CL:0000622,1.92e-09,5;CL:0000453,2.17e-09,5;CL:0000154,5.17e-08,6;CL:0000840,5.74e-08,5;CL:0001029,5.74e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0004874;7.76e-12;1!UBERON:0008814;8.93e-07;2!UBERON:0010056;8.93e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;4.78e-12;1!DOID:3149;4.78e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,5.62e-12,1;DOID:3149,5.62e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0000166!3.87e-11!21;UBERON:0001042!4.88e-10!10;UBERON:0009145!4.88e-10!10;UBERON:0000165!5.42e-10!28;UBERON:0000930!5.42e-10!28;UBERON:0003408!1.19e-09!10;UBERON:0003102!3.12e-09!95;UBERON:0006562!4.29e-09!11;UBERON:0001444!9.01e-08!48;UBERON:0000161!1.10e-07!35;UBERON:0000078!1.13e-07!18;UBERON:0001004!1.39e-07!72;UBERON:0001557!5.43e-07!19;UBERON:0001003!5.69e-07!14;UBERON:0007376!5.69e-07!14;UBERON:0007383!5.69e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;2.70e-15;3!UBERON:0001033;2.70e-15;3!UBERON:0007029;2.93e-12;1!UBERON:0005795;4.78e-12;1!UBERON:0002372;6.61e-12;1!UBERON:0001961;6.61e-12;1!UBERON:0001744;6.61e-12;1!UBERON:0001042;6.61e-12;1!UBERON:0001735;6.61e-12;1!UBERON:0000989;7.76e-12;1!UBERON:0008811;7.76e-12;1!UBERON:0000014;9.37e-12;4!UBERON:0000165;2.17e-09;28!UBERON:0000002;4.12e-08;6!UBERON:0001560;4.12e-08;6!UBERON:0001003;7.65e-07;15!UBERON:0007376;7.65e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,2.80e-15,3;UBERON:0001033,2.80e-15,3;UBERON:0010056,2.80e-15,3;UBERON:0007029,2.93e-12,1;UBERON:0000166,6.03e-12,22;UBERON:0002372,6.26e-12,1;UBERON:0001961,6.26e-12,1;UBERON:0001744,6.26e-12,1;UBERON:0001735,6.26e-12,1;UBERON:0000989,7.76e-12,1;UBERON:0008811,7.76e-12,1;UBERON:0006258,7.76e-12,1;UBERON:0005876,7.76e-12,1;UBERON:0004874,7.76e-12,1;UBERON:0000014,1.02e-11,4;UBERON:0001042,3.41e-10,10;UBERON:0009145,3.41e-10,10;UBERON:0006562,2.59e-09,11;UBERON:0000165,4.91e-09,29;UBERON:0000930,4.91e-09,29;UBERON:0000002,3.90e-08,6;UBERON:0001560,3.90e-08,6;UBERON:0003102,1.86e-07,99;UBERON:0000161,3.00e-07,36;UBERON:0001003,7.50e-07,15;UBERON:0007376,7.50e-07,15;UBERON:0007383,7.50e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09098448236334,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,1.1240175325762,0.301586917234893,0.0925884451585296,0,0,0,0,0,0,0,0,1.58040879591855,0.858486162094873,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95018073810956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43050537267123,0,1.7737206141467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67165076416218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945550727071745,0,0,0,0,0,0,0,0,0,0,9.89908584378083,4.92481654424301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685946781900644,0,0,0,0.580537987734511,0.511625219603299,0.492692742319255,0.193978032976839,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.799791132412,4.6428117273477,0,4.02521625119119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617602894321944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97726707033577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0.3414369541879,5.53007729451273,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,10.6856418473011,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0.322944549180031,0.372448285775147,0,0,0,26.5614432434293,3.42233301085281,3.83906702183149,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,4.06896178315738,0,0.201273793591026,0 | |||
|short_description=p1@ALOX12B | |||
}} |
Revision as of 16:30, 11 September 2013
Short description: | p1@ALOX12B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ALOX12B_5end |
Coexpression cluster: | C197_tongue_esophagus_tonsil_salivary_cervix_nasal_Gingival |
Association with transcript: | -5bp_to_ENST00000319144_5end |
EntrezGene: | ALOX12B |
HGNC: | 430 |
UniProt: | O75342 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 4.86e-22 | 2 |
immature CD1a-positive Langerhans cell | 4.86e-22 | 2 |
epithelial cell of esophagus | 1.19e-11 | 1 |
acinar cell | 1.92e-09 | 5 |
Langerhans cell | 2.17e-09 | 5 |
protein secreting cell | 5.17e-08 | 6 |
immature conventional dendritic cell | 5.74e-08 | 5 |
common dendritic progenitor | 5.74e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
tongue | 2.80e-15 | 3 |
gustatory system | 2.80e-15 | 3 |
future tongue | 2.80e-15 | 3 |
surface | 2.93e-12 | 1 |
oral opening | 6.03e-12 | 22 |
tonsil | 6.26e-12 | 1 |
mucosa-associated lymphoid tissue | 6.26e-12 | 1 |
lymphoid tissue | 6.26e-12 | 1 |
tonsillar ring | 6.26e-12 | 1 |
penis | 7.76e-12 | 1 |
intromittent organ | 7.76e-12 | 1 |
lateral plate mesenchyme | 7.76e-12 | 1 |
undifferentiated genital tubercle | 7.76e-12 | 1 |
somatopleure | 7.76e-12 | 1 |
zone of skin | 1.02e-11 | 4 |
chordate pharynx | 3.41e-10 | 10 |
pharyngeal region of foregut | 3.41e-10 | 10 |
pharynx | 2.59e-09 | 11 |
mouth | 4.91e-09 | 29 |
stomodeum | 4.91e-09 | 29 |
uterine cervix | 3.90e-08 | 6 |
neck of organ | 3.90e-08 | 6 |
surface structure | 1.86e-07 | 99 |
orifice | 3.00e-07 | 36 |
skin epidermis | 7.50e-07 | 15 |
outer epithelium | 7.50e-07 | 15 |
enveloping layer of ectoderm | 7.50e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 5.62e-12 | 1 |
keratoacanthoma | 5.62e-12 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.