FFCP PHASE1:Hg19::chr19:46806885..46806888,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=64344|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=15825|TSSclassifier=S|UniProt=|association_with_transcript=9bp_to_uc002pel.2_5end|description=CAGE_peak_11_at_HIF3A_5end|id=chr19:46806885..46806888,+|ontology_enrichment_celltype=CL:0002575!1.33e-08!2;CL:0002536!6.77e-08!2|ontology_enrichment_celltype_v019=CL:0002575;1.37e-44;2!CL:0000669;6.79e-23;4!CL:0002577;8.63e-09;3!CL:0002231;1.04e-08;3!CL:0002563;6.68e-07;4|ontology_enrichment_celltype_v019_2=CL:0002575,1.53e-44,2;CL:0000669,7.18e-23,4;CL:0002577,8.96e-09,3;CL:0002231,1.12e-08,3;CL:0002563,6.50e-07,4|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002616!2.52e-21!59;UBERON:0001049!5.69e-20!57;UBERON:0005068!5.69e-20!57;UBERON:0006241!5.69e-20!57;UBERON:0007135!5.69e-20!57;UBERON:0000955!5.67e-19!69;UBERON:0006238!5.67e-19!69;UBERON:0002020!9.13e-18!34;UBERON:0003528!9.13e-18!34;UBERON:0005743!3.27e-17!86;UBERON:0007023!6.50e-17!115;UBERON:0001017!9.65e-17!82;UBERON:0002780!1.20e-16!41;UBERON:0001890!1.20e-16!41;UBERON:0006240!1.20e-16!41;UBERON:0003080!3.60e-16!42;UBERON:0005631!3.14e-15!14;UBERON:0000158!3.14e-15!14;UBERON:0000073!4.86e-15!94;UBERON:0001016!4.86e-15!94;UBERON:0003075!2.57e-14!86;UBERON:0007284!2.57e-14!86;UBERON:0002791!1.16e-13!33;UBERON:0002346!1.93e-13!90;UBERON:0001893!3.46e-13!34;UBERON:0002308!1.90e-12!9;UBERON:0000125!1.90e-12!9;UBERON:0001869!5.51e-12!32;UBERON:0003056!1.88e-11!61;UBERON:0000349!3.51e-11!5;UBERON:0006331!2.53e-10!3;UBERON:0000033!2.53e-10!123;UBERON:0002619!2.68e-10!22;UBERON:0002771!3.51e-10!3;UBERON:0004121!4.74e-10!169;UBERON:0002298!5.04e-10!8;UBERON:0001871!5.79e-10!7;UBERON:0000924!1.15e-09!173;UBERON:0006601!1.15e-09!173;UBERON:0000153!1.39e-09!129;UBERON:0007811!1.39e-09!129;UBERON:0002420!5.92e-09!9;UBERON:0007245!5.92e-09!9;UBERON:0010009!5.92e-09!9;UBERON:0010011!5.92e-09!9;UBERON:0000454!5.92e-09!9;UBERON:0000956!6.39e-09!25;UBERON:0000203!6.39e-09!25;UBERON:0001987!6.76e-09!4;UBERON:0004340!6.76e-09!4;UBERON:0000064!9.41e-09!219;UBERON:0003124!1.79e-08!7;UBERON:0000305!2.22e-08!7;UBERON:0000478!2.75e-08!24;UBERON:0000007!3.74e-08!2;UBERON:0001954!4.46e-08!2;UBERON:0003022!4.46e-08!2;UBERON:0002421!4.46e-08!2;UBERON:0002600!4.46e-08!2;UBERON:0009663!1.26e-07!7;UBERON:0002148!2.22e-07!2;UBERON:0009662!2.22e-07!2;UBERON:0004871!2.49e-07!8;UBERON:0000062!3.55e-07!511;UBERON:0001950!7.15e-07!20|ontology_enrichment_uberon_v019=UBERON:0005409;1.00e-15;22!UBERON:0000160;1.13e-11;17!UBERON:0004921;7.85e-11;33!UBERON:0001987;6.68e-07;4!UBERON:0001242;6.68e-07;4!UBERON:0001262;6.68e-07;4!UBERON:0004786;6.68e-07;4!UBERON:0004808;6.68e-07;4!UBERON:0001277;6.68e-07;4!UBERON:0001052;9.36e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0005409,5.33e-14,25;UBERON:0000160,1.03e-11,17;UBERON:0001242,6.50e-07,4;UBERON:0001262,6.50e-07,4;UBERON:0004786,6.50e-07,4;UBERON:0004808,6.50e-07,4;UBERON:0001277,6.50e-07,4;UBERON:0001987,6.87e-07,4;UBERON:0004340,6.87e-07,4;UBERON:0001052,8.61e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605429710579726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.07471096357784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.93701736194111,1.02943027143257,0,0,0,3.03127571446259,0,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,2.90062679019893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,0,0.921482106297696,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619202951523374,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0.199679000498991,0,0,0.604651252380536,0,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0,0,0,0,0,0,0,0,0.472091293214983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0.314408610199332,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=64344 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15825 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=9bp_to_uc002pel.2_5end | |||
|description=CAGE_peak_11_at_HIF3A_5end | |||
|id=chr19:46806885..46806888,+ | |||
|ontology_enrichment_celltype=CL:0002575!1.33e-08!2;CL:0002536!6.77e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0002575;1.37e-44;2!CL:0000669;6.79e-23;4!CL:0002577;8.63e-09;3!CL:0002231;1.04e-08;3!CL:0002563;6.68e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,1.53e-44,2;CL:0000669,7.18e-23,4;CL:0002577,8.96e-09,3;CL:0002231,1.12e-08,3;CL:0002563,6.50e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002616!2.52e-21!59;UBERON:0001049!5.69e-20!57;UBERON:0005068!5.69e-20!57;UBERON:0006241!5.69e-20!57;UBERON:0007135!5.69e-20!57;UBERON:0000955!5.67e-19!69;UBERON:0006238!5.67e-19!69;UBERON:0002020!9.13e-18!34;UBERON:0003528!9.13e-18!34;UBERON:0005743!3.27e-17!86;UBERON:0007023!6.50e-17!115;UBERON:0001017!9.65e-17!82;UBERON:0002780!1.20e-16!41;UBERON:0001890!1.20e-16!41;UBERON:0006240!1.20e-16!41;UBERON:0003080!3.60e-16!42;UBERON:0005631!3.14e-15!14;UBERON:0000158!3.14e-15!14;UBERON:0000073!4.86e-15!94;UBERON:0001016!4.86e-15!94;UBERON:0003075!2.57e-14!86;UBERON:0007284!2.57e-14!86;UBERON:0002791!1.16e-13!33;UBERON:0002346!1.93e-13!90;UBERON:0001893!3.46e-13!34;UBERON:0002308!1.90e-12!9;UBERON:0000125!1.90e-12!9;UBERON:0001869!5.51e-12!32;UBERON:0003056!1.88e-11!61;UBERON:0000349!3.51e-11!5;UBERON:0006331!2.53e-10!3;UBERON:0000033!2.53e-10!123;UBERON:0002619!2.68e-10!22;UBERON:0002771!3.51e-10!3;UBERON:0004121!4.74e-10!169;UBERON:0002298!5.04e-10!8;UBERON:0001871!5.79e-10!7;UBERON:0000924!1.15e-09!173;UBERON:0006601!1.15e-09!173;UBERON:0000153!1.39e-09!129;UBERON:0007811!1.39e-09!129;UBERON:0002420!5.92e-09!9;UBERON:0007245!5.92e-09!9;UBERON:0010009!5.92e-09!9;UBERON:0010011!5.92e-09!9;UBERON:0000454!5.92e-09!9;UBERON:0000956!6.39e-09!25;UBERON:0000203!6.39e-09!25;UBERON:0001987!6.76e-09!4;UBERON:0004340!6.76e-09!4;UBERON:0000064!9.41e-09!219;UBERON:0003124!1.79e-08!7;UBERON:0000305!2.22e-08!7;UBERON:0000478!2.75e-08!24;UBERON:0000007!3.74e-08!2;UBERON:0001954!4.46e-08!2;UBERON:0003022!4.46e-08!2;UBERON:0002421!4.46e-08!2;UBERON:0002600!4.46e-08!2;UBERON:0009663!1.26e-07!7;UBERON:0002148!2.22e-07!2;UBERON:0009662!2.22e-07!2;UBERON:0004871!2.49e-07!8;UBERON:0000062!3.55e-07!511;UBERON:0001950!7.15e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;1.00e-15;22!UBERON:0000160;1.13e-11;17!UBERON:0004921;7.85e-11;33!UBERON:0001987;6.68e-07;4!UBERON:0001242;6.68e-07;4!UBERON:0001262;6.68e-07;4!UBERON:0004786;6.68e-07;4!UBERON:0004808;6.68e-07;4!UBERON:0001277;6.68e-07;4!UBERON:0001052;9.36e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,5.33e-14,25;UBERON:0000160,1.03e-11,17;UBERON:0001242,6.50e-07,4;UBERON:0001262,6.50e-07,4;UBERON:0004786,6.50e-07,4;UBERON:0004808,6.50e-07,4;UBERON:0001277,6.50e-07,4;UBERON:0001987,6.87e-07,4;UBERON:0004340,6.87e-07,4;UBERON:0001052,8.61e-07,4 | |||
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|short_description=p11@HIF3A | |||
}} |
Revision as of 21:23, 11 September 2013
Short description: | p11@HIF3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_HIF3A_5end |
Coexpression cluster: | NA |
Association with transcript: | 9bp_to_uc002pel.2_5end |
EntrezGene: | HIF3A |
HGNC: | 15825 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 1.53e-44 | 2 |
pericyte cell | 7.18e-23 | 4 |
placental epithelial cell | 8.96e-09 | 3 |
epithelial cell of prostate | 1.12e-08 | 3 |
intestinal epithelial cell | 6.50e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 5.33e-14 | 25 |
intestine | 1.03e-11 | 17 |
intestinal mucosa | 6.50e-07 | 4 |
wall of intestine | 6.50e-07 | 4 |
gastrointestinal system mucosa | 6.50e-07 | 4 |
gastrointestinal system epithelium | 6.50e-07 | 4 |
intestinal epithelium | 6.50e-07 | 4 |
placenta | 6.87e-07 | 4 |
allantois | 6.87e-07 | 4 |
rectum | 8.61e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.