FFCP PHASE1:Hg19::chr19:48244802..48244816,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=30846 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=3243 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=307bp_to_AK026134_5end | |||
|coexpression_cluster_id=C764 | |||
|description=CAGE_peak_2_at_EHD2_5end | |||
|id=chr19:48244802..48244816,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.75e-28!180;CL:0000222!9.09e-20!119;CL:0000057!7.27e-19!75;CL:0000220!2.56e-16!246;CL:0000183!3.88e-16!59;CL:0002321!5.38e-16!248;CL:0000680!3.97e-15!57;CL:0000056!3.97e-15!57;CL:0000355!3.97e-15!57;CL:0000187!1.95e-14!54;CL:0000192!1.89e-13!42;CL:0000514!1.89e-13!42;CL:0002371!5.07e-12!591;CL:0000393!8.26e-12!60;CL:0000211!8.26e-12!60;CL:0000144!2.82e-10!625;CL:0000359!1.71e-09!32;CL:0000548!4.14e-08!679;CL:0000004!4.14e-08!679;CL:0000255!4.14e-08!679;CL:0000012!1.69e-07!682;CL:0002620!2.02e-07!23;CL:0002078!8.55e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0000192;1.45e-10;43!CL:0000359;2.27e-09;32!CL:0000187;2.00e-08;55!CL:0000134;2.31e-08;55!CL:0000057;6.00e-08;73!CL:0002620;1.03e-07;23!CL:0000048;3.76e-07;58!CL:0002334;4.19e-07;12!CL:0000723;4.41e-07;61!CL:0002320;7.78e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.65e-21,121;CL:0000057,2.41e-20,76;CL:0000680,3.20e-16,58;CL:0000056,3.20e-16,58;CL:0000355,3.20e-16,58;CL:0000187,1.80e-15,55;CL:0002321,2.63e-15,250;CL:0000192,3.23e-14,43;CL:0000514,3.23e-14,43;CL:0000393,2.85e-12,61;CL:0000211,2.85e-12,61;CL:0000359,1.65e-09,32;CL:0002620,6.48e-08,23;CL:0002078,2.30e-07,45;CL:0002334,4.11e-07,12;CL:0000213,6.51e-07,58;CL:0000215,6.51e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;1.45e-10;43!CL:0000355;2.49e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!2.71e-18!143;UBERON:0000914!8.36e-18!83;UBERON:0002329!8.36e-18!83;UBERON:0003077!8.36e-18!83;UBERON:0003059!8.36e-18!83;UBERON:0007282!8.36e-18!83;UBERON:0009618!8.36e-18!83;UBERON:0007285!8.36e-18!83;UBERON:0000486!1.27e-17!82;UBERON:0002049!2.00e-17!79;UBERON:0007798!2.00e-17!79;UBERON:0004290!1.77e-16!70;UBERON:0000475!3.79e-16!365;UBERON:0000055!1.28e-15!69;UBERON:0004872!3.04e-15!84;UBERON:0002100!3.65e-15!216;UBERON:0001981!1.12e-14!60;UBERON:0007500!1.12e-14!60;UBERON:0004537!1.12e-14!60;UBERON:0006965!1.12e-14!60;UBERON:0001134!1.35e-14!61;UBERON:0002036!1.35e-14!61;UBERON:0003082!1.35e-14!61;UBERON:0002385!1.58e-14!63;UBERON:0001015!1.58e-14!63;UBERON:0000383!1.58e-14!63;UBERON:0003102!2.77e-14!95;UBERON:0000490!8.86e-13!138;UBERON:0003914!9.40e-13!118;UBERON:0000119!1.31e-12!312;UBERON:0000483!2.95e-12!309;UBERON:0001637!4.32e-12!42;UBERON:0003509!4.32e-12!42;UBERON:0004572!4.32e-12!42;UBERON:0003104!1.14e-11!238;UBERON:0009142!1.14e-11!238;UBERON:0000481!2.16e-11!347;UBERON:0000468!2.24e-11!659;UBERON:0000477!1.06e-10!286;UBERON:0001009!1.81e-10!113;UBERON:0004535!2.57e-10!110;UBERON:0004573!1.58e-09!33;UBERON:0004571!1.58e-09!33;UBERON:0002199!4.95e-09!45;UBERON:0002416!4.95e-09!45;UBERON:0000467!1.74e-08!625;UBERON:0000480!2.77e-08!626;UBERON:0004111!5.75e-08!241;UBERON:0002097!1.99e-07!40;UBERON:0000947!4.14e-07!21;UBERON:0010191!4.14e-07!21 | |||
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| |||
|short_description=p2@EHD2 | |||
}} |
Revision as of 21:32, 11 September 2013
Short description: | p2@EHD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_EHD2_5end |
Coexpression cluster: | C764_Olfactory_Mesenchymal_Synoviocyte_Adipocyte_tenocyte_Chondrocyte_Multipotent |
Association with transcript: | 307bp_to_AK026134_5end |
EntrezGene: | EHD2 |
HGNC: | 3243 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.65e-21 | 121 |
fibroblast | 2.41e-20 | 76 |
muscle precursor cell | 3.20e-16 | 58 |
myoblast | 3.20e-16 | 58 |
multi-potent skeletal muscle stem cell | 3.20e-16 | 58 |
muscle cell | 1.80e-15 | 55 |
embryonic cell | 2.63e-15 | 250 |
smooth muscle cell | 3.23e-14 | 43 |
smooth muscle myoblast | 3.23e-14 | 43 |
electrically responsive cell | 2.85e-12 | 61 |
electrically active cell | 2.85e-12 | 61 |
vascular associated smooth muscle cell | 1.65e-09 | 32 |
skin fibroblast | 6.48e-08 | 23 |
meso-epithelial cell | 2.30e-07 | 45 |
preadipocyte | 4.11e-07 | 12 |
lining cell | 6.51e-07 | 58 |
barrier cell | 6.51e-07 | 58 |
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