FFCP PHASE1:Hg19::chr19:9964687..9964698,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1245|description=CAGE_peak_at_chr19:9964687..9964698,-|id=chr19:9964687..9964698,-|ontology_enrichment_celltype=CL:0000047!4.71e-10!8;CL:0000540!8.50e-08!6;CL:0000031!8.50e-08!6;CL:0000404!8.50e-08!6|ontology_enrichment_celltype_v019=CL:0000047;2.71e-12;2|ontology_enrichment_celltype_v019_2=CL:0000047,1.29e-11,8|ontology_enrichment_development_v019=UBERON:0006215;1.74e-08;3!UBERON:0003099;2.44e-07;1!UBERON:0003852;2.44e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:1192;7.91e-09;3!DOID:3369;5.60e-07;1|ontology_enrichment_disease_v019_2=DOID:1192,7.20e-09,3;DOID:3369,4.57e-07,1|ontology_enrichment_uberon=UBERON:0001017!1.52e-36!82;UBERON:0005743!4.54e-35!86;UBERON:0001049!1.44e-32!57;UBERON:0005068!1.44e-32!57;UBERON:0006241!1.44e-32!57;UBERON:0007135!1.44e-32!57;UBERON:0000073!2.30e-32!94;UBERON:0001016!2.30e-32!94;UBERON:0002616!3.91e-29!59;UBERON:0002346!7.93e-28!90;UBERON:0000955!2.69e-26!69;UBERON:0006238!2.69e-26!69;UBERON:0003075!1.50e-24!86;UBERON:0007284!1.50e-24!86;UBERON:0003080!1.30e-23!42;UBERON:0002780!1.07e-22!41;UBERON:0001890!1.07e-22!41;UBERON:0006240!1.07e-22!41;UBERON:0000924!4.74e-21!173;UBERON:0006601!4.74e-21!173;UBERON:0007023!5.66e-20!115;UBERON:0002020!5.33e-19!34;UBERON:0003528!5.33e-19!34;UBERON:0004121!1.35e-18!169;UBERON:0001893!2.92e-18!34;UBERON:0002791!7.48e-18!33;UBERON:0001869!4.19e-17!32;UBERON:0003056!1.49e-15!61;UBERON:0000956!2.06e-15!25;UBERON:0000203!2.06e-15!25;UBERON:0000153!4.56e-15!129;UBERON:0007811!4.56e-15!129;UBERON:0002619!9.02e-15!22;UBERON:0000033!1.68e-14!123;UBERON:0001950!2.49e-13!20;UBERON:0003076!5.14e-10!15;UBERON:0003057!5.14e-10!15;UBERON:0001871!3.76e-08!7;UBERON:0004733!8.85e-08!12;UBERON:0002028!8.85e-08!12;UBERON:0007277!8.85e-08!12;UBERON:0002298!8.95e-08!8;UBERON:0004732!5.57e-07!13|ontology_enrichment_uberon_v019=UBERON:0002050;5.82e-11;5!UBERON:0005423;5.82e-11;5!UBERON:0000922;2.40e-09;49!UBERON:0005705;2.44e-07;1!UBERON:0008193;2.44e-07;1!UBERON:0010912;2.44e-07;1!UBERON:0002514;2.44e-07;1!UBERON:0003457;2.44e-07;1!UBERON:0008907;2.44e-07;1!UBERON:0008001;2.44e-07;1!UBERON:0007213;2.44e-07;1!UBERON:0009891;2.44e-07;1!UBERON:0007914;2.44e-07;1!UBERON:0007375;2.44e-07;1!UBERON:0003323;2.44e-07;1!UBERON:0010258;2.44e-07;1!UBERON:0005253;2.44e-07;1!UBERON:0007842;2.44e-07;1!UBERON:0002397;2.44e-07;1!UBERON:0003113;2.44e-07;1!UBERON:0003277;2.44e-07;1!UBERON:0001709;2.44e-07;1!UBERON:0002244;2.44e-07;1!UBERON:0005620;2.44e-07;1!UBERON:0010364;2.44e-07;1!UBERON:0004288;2.44e-07;1!UBERON:0005795;5.60e-07;1!UBERON:0007029;5.60e-07;1!UBERON:0001950;7.71e-07;20!UBERON:0002346;9.74e-07;4!UBERON:0000923;9.74e-07;4!UBERON:0010316;9.74e-07;4!UBERON:0005291;9.74e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.18e-13,89;UBERON:0001017,1.52e-12,81;UBERON:0004121,4.42e-09,171;UBERON:0000924,4.42e-09,171;UBERON:0006601,4.42e-09,171;UBERON:0005705,2.23e-07,1;UBERON:0008193,2.23e-07,1;UBERON:0010912,2.23e-07,1;UBERON:0002514,2.23e-07,1;UBERON:0003457,2.23e-07,1;UBERON:0008907,2.23e-07,1;UBERON:0008001,2.23e-07,1;UBERON:0007213,2.23e-07,1;UBERON:0009891,2.23e-07,1;UBERON:0007914,2.23e-07,1;UBERON:0009292,2.23e-07,1;UBERON:0003099,2.23e-07,1;UBERON:0007375,2.23e-07,1;UBERON:0003323,2.23e-07,1;UBERON:0010258,2.23e-07,1;UBERON:0007842,2.23e-07,1;UBERON:0009494,2.23e-07,1;UBERON:0010042,2.23e-07,1;UBERON:0010045,2.23e-07,1;UBERON:0010259,2.23e-07,1;UBERON:0010359,2.23e-07,1;UBERON:0009526,2.23e-07,1;UBERON:0002397,2.23e-07,1;UBERON:0003113,2.23e-07,1;UBERON:0003277,2.23e-07,1;UBERON:0001709,2.23e-07,1;UBERON:0004066,2.23e-07,1;UBERON:0002244,2.23e-07,1;UBERON:0005620,2.23e-07,1;UBERON:0004362,2.23e-07,1;UBERON:0010364,2.23e-07,1;UBERON:0010046,2.23e-07,1;UBERON:0005868,2.23e-07,1;UBERON:0007238,2.23e-07,1;UBERON:0004288,2.23e-07,1;UBERON:0004068,2.23e-07,1;UBERON:0010334,2.23e-07,1;UBERON:0003852,2.23e-07,1;UBERON:0010253,2.23e-07,1;UBERON:0002346,2.58e-07,86;UBERON:0000073,2.65e-07,53;UBERON:0002616,2.65e-07,53;UBERON:0007029,3.01e-07,1;UBERON:0001049,7.66e-07,56;UBERON:0005068,7.66e-07,56;UBERON:0006241,7.66e-07,56;UBERON:0007135,7.66e-07,56;UBERON:0001950,8.03e-07,20|phase1_expression=0.726713517082227,0.856402095563933,0,1.0007329835313,0,0,0,1.26343974685366,0,0,0,0,0,0,0,0,0,0,0,0,0,0.626909442956176,0.286235987131057,0,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0.128091319725675,0,0,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,1.00267582127178,0.144846518960824,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1245 | |||
|description=CAGE_peak_at_chr19:9964687..9964698,- | |||
|id=chr19:9964687..9964698,- | |||
|ontology_enrichment_celltype=CL:0000047!4.71e-10!8;CL:0000540!8.50e-08!6;CL:0000031!8.50e-08!6;CL:0000404!8.50e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000047;2.71e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.29e-11,8 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.74e-08;3!UBERON:0003099;2.44e-07;1!UBERON:0003852;2.44e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1192;7.91e-09;3!DOID:3369;5.60e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1192,7.20e-09,3;DOID:3369,4.57e-07,1 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002050;5.82e-11;5!UBERON:0005423;5.82e-11;5!UBERON:0000922;2.40e-09;49!UBERON:0005705;2.44e-07;1!UBERON:0008193;2.44e-07;1!UBERON:0010912;2.44e-07;1!UBERON:0002514;2.44e-07;1!UBERON:0003457;2.44e-07;1!UBERON:0008907;2.44e-07;1!UBERON:0008001;2.44e-07;1!UBERON:0007213;2.44e-07;1!UBERON:0009891;2.44e-07;1!UBERON:0007914;2.44e-07;1!UBERON:0007375;2.44e-07;1!UBERON:0003323;2.44e-07;1!UBERON:0010258;2.44e-07;1!UBERON:0005253;2.44e-07;1!UBERON:0007842;2.44e-07;1!UBERON:0002397;2.44e-07;1!UBERON:0003113;2.44e-07;1!UBERON:0003277;2.44e-07;1!UBERON:0001709;2.44e-07;1!UBERON:0002244;2.44e-07;1!UBERON:0005620;2.44e-07;1!UBERON:0010364;2.44e-07;1!UBERON:0004288;2.44e-07;1!UBERON:0005795;5.60e-07;1!UBERON:0007029;5.60e-07;1!UBERON:0001950;7.71e-07;20!UBERON:0002346;9.74e-07;4!UBERON:0000923;9.74e-07;4!UBERON:0010316;9.74e-07;4!UBERON:0005291;9.74e-07;4 | |||
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|short_description=p@chr19:9964687..9964698,- | |||
}} |
Revision as of 23:06, 11 September 2013
Short description: | p@chr19:9964687..9964698, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:9964687..9964698, - |
Coexpression cluster: | C1245_normal_Neurons_parietal_temporal_neuroectodermal_occipital_basal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.29e-11 | 8 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system neoplasm | 7.20e-09 | 3 |
peripheral primitive neuroectodermal tumor | 4.57e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.