FFCP PHASE1:Hg19::chr1:209827344..209827383,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1155|description=CAGE_peak_at_chr1:209827344..209827383,-|id=chr1:209827344..209827383,-|ontology_enrichment_celltype=CL:0002076!1.58e-27!43;CL:0000223!1.59e-26!59;CL:0002368!4.43e-15!13;CL:0002621!4.71e-13!3;CL:0000066!3.05e-12!254;CL:0002251!1.58e-11!21;CL:0000244!3.56e-10!4;CL:0000731!3.56e-10!4;CL:0002159!1.11e-07!13;CL:0002202!1.13e-07!9;CL:0002632!1.13e-07!9;CL:0002231!5.77e-07!3|ontology_enrichment_celltype_v019=CL:0002231;3.87e-30;3!CL:0002563;5.14e-23;4!CL:0002253;2.45e-12;2!CL:0002076;3.56e-12;42!CL:0002328;1.40e-08;3!CL:0002541;1.40e-08;3!CL:0000182;2.24e-08;12|ontology_enrichment_celltype_v019_2=CL:0002231,3.59e-30,3;CL:0002563,4.60e-23,4;CL:0000223,1.71e-18,58;CL:0002076,2.77e-13,42;CL:0002253,2.32e-12,2;CL:0002328,1.40e-08,3;CL:0002541,1.51e-08,3;CL:0000182,2.29e-08,12|ontology_enrichment_development_v019=CL:0000223;4.34e-13;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!3.19e-15!169;UBERON:0000925!3.19e-15!169;UBERON:0006595!3.19e-15!169;UBERON:0001949!4.71e-13!3;UBERON:0005911!1.23e-12!82;UBERON:0003929!1.24e-10!54;UBERON:0001007!8.81e-10!155;UBERON:0001555!8.81e-10!155;UBERON:0007026!8.81e-10!155;UBERON:0006554!3.60e-09!44;UBERON:0001008!6.42e-09!45;UBERON:0004921!2.84e-08!129;UBERON:0004185!2.84e-08!129;UBERON:0000365!3.19e-08!5;UBERON:0007196!3.46e-07!14;UBERON:0001558!3.46e-07!14;UBERON:0005910!6.48e-07!6|ontology_enrichment_uberon_v019=UBERON:0000485;8.26e-29;7!UBERON:0001242;5.14e-23;4!UBERON:0001262;5.14e-23;4!UBERON:0004786;5.14e-23;4!UBERON:0004808;5.14e-23;4!UBERON:0001277;5.14e-23;4!UBERON:0003929;1.31e-13;7!UBERON:0003350;4.94e-12;8!UBERON:0002107;3.25e-11;19!UBERON:0006925;3.25e-11;19!UBERON:0002367;5.75e-09;11!UBERON:0010147;5.75e-09;11!UBERON:0002423;1.13e-08;25!UBERON:0004815;1.40e-08;3!UBERON:0002031;1.40e-08;3!UBERON:0003124;1.40e-08;3!UBERON:0000920;1.40e-08;3!UBERON:0003937;2.70e-08;12!UBERON:0005399;2.70e-08;12!UBERON:0002365;2.52e-07;31!UBERON:0002330;2.52e-07;31!UBERON:0001007;7.40e-07;81!UBERON:0002530;8.15e-07;57!UBERON:0001052;8.37e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0001242,4.60e-23,4;UBERON:0001262,4.60e-23,4;UBERON:0004786,4.60e-23,4;UBERON:0004808,4.60e-23,4;UBERON:0001277,4.60e-23,4;UBERON:0000485,1.26e-22,9;UBERON:0003929,6.12e-20,54;UBERON:0005911,4.96e-17,82;UBERON:0003350,4.67e-12,8;UBERON:0004921,1.12e-11,118;UBERON:0002107,3.31e-11,19;UBERON:0006925,3.31e-11,19;UBERON:0008836,3.31e-11,19;UBERON:0001046,4.22e-11,19;UBERON:0008835,9.12e-10,22;UBERON:0003894,9.12e-10,22;UBERON:0002530,1.46e-09,59;UBERON:0001007,1.80e-09,145;UBERON:0001555,1.80e-09,145;UBERON:0007026,1.80e-09,145;UBERON:0009854,2.28e-09,23;UBERON:0000490,2.44e-09,148;UBERON:0002367,5.64e-09,11;UBERON:0010147,5.64e-09,11;UBERON:0009846,5.64e-09,11;UBERON:0003353,5.64e-09,11;UBERON:0004902,5.64e-09,11;UBERON:0003820,5.64e-09,11;UBERON:0009847,5.64e-09,11;UBERON:0007499,1.14e-08,25;UBERON:0009497,1.14e-08,25;UBERON:0000015,1.14e-08,25;UBERON:0002423,1.14e-08,25;UBERON:0006235,1.14e-08,25;UBERON:0004161,1.14e-08,25;UBERON:0004815,1.40e-08,3;UBERON:0002031,1.40e-08,3;UBERON:0004119,1.47e-08,160;UBERON:0000925,1.47e-08,160;UBERON:0006595,1.47e-08,160;UBERON:0000920,1.51e-08,3;UBERON:0009856,2.34e-08,26;UBERON:0003937,2.65e-08,12;UBERON:0005399,2.65e-08,12;UBERON:0000162,3.04e-07,14;UBERON:0001353,3.04e-07,14;UBERON:0000163,3.04e-07,14;UBERON:0006866,3.04e-07,14;UBERON:0000164,3.04e-07,14;UBERON:0000931,3.04e-07,14;UBERON:0002365,4.21e-07,31;UBERON:0002330,4.21e-07,31;UBERON:0004122,8.09e-07,15;UBERON:0001052,8.14e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10926203050036,0,0,0,0,0.401088894940283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0.728590576585084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0,5.90789906681404,0,3.81264159483652,0,0.109750285408626,0,0.301586917234893,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.62578348774867,1.20303882181971,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0.764628819135115,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33056983072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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1155 | |||
|description=CAGE_peak_at_chr1:209827344..209827383,- | |||
|id=chr1:209827344..209827383,- | |||
|ontology_enrichment_celltype=CL:0002076!1.58e-27!43;CL:0000223!1.59e-26!59;CL:0002368!4.43e-15!13;CL:0002621!4.71e-13!3;CL:0000066!3.05e-12!254;CL:0002251!1.58e-11!21;CL:0000244!3.56e-10!4;CL:0000731!3.56e-10!4;CL:0002159!1.11e-07!13;CL:0002202!1.13e-07!9;CL:0002632!1.13e-07!9;CL:0002231!5.77e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002231;3.87e-30;3!CL:0002563;5.14e-23;4!CL:0002253;2.45e-12;2!CL:0002076;3.56e-12;42!CL:0002328;1.40e-08;3!CL:0002541;1.40e-08;3!CL:0000182;2.24e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,3.59e-30,3;CL:0002563,4.60e-23,4;CL:0000223,1.71e-18,58;CL:0002076,2.77e-13,42;CL:0002253,2.32e-12,2;CL:0002328,1.40e-08,3;CL:0002541,1.51e-08,3;CL:0000182,2.29e-08,12 | |||
|ontology_enrichment_development_v019=CL:0000223;4.34e-13;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!3.19e-15!169;UBERON:0000925!3.19e-15!169;UBERON:0006595!3.19e-15!169;UBERON:0001949!4.71e-13!3;UBERON:0005911!1.23e-12!82;UBERON:0003929!1.24e-10!54;UBERON:0001007!8.81e-10!155;UBERON:0001555!8.81e-10!155;UBERON:0007026!8.81e-10!155;UBERON:0006554!3.60e-09!44;UBERON:0001008!6.42e-09!45;UBERON:0004921!2.84e-08!129;UBERON:0004185!2.84e-08!129;UBERON:0000365!3.19e-08!5;UBERON:0007196!3.46e-07!14;UBERON:0001558!3.46e-07!14;UBERON:0005910!6.48e-07!6 | |||
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|short_description=p@chr1:209827344..209827383,- | |||
}} |
Revision as of 03:22, 12 September 2013
Short description: | p@chr1:209827344..209827383, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:209827344..209827383, - |
Coexpression cluster: | C1155_Hepatocyte_Intestinal_Prostate_liver_colon_small_Retinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 3.59e-30 | 3 |
intestinal epithelial cell | 4.60e-23 | 4 |
endodermal cell | 1.71e-18 | 58 |
endo-epithelial cell | 2.77e-13 | 42 |
epithelial cell of large intestine | 2.32e-12 | 2 |
bronchial epithelial cell | 1.40e-08 | 3 |
chorionic membrane mesenchymal stem cell | 1.51e-08 | 3 |
hepatocyte | 2.29e-08 | 12 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.