FFCP PHASE1:Hg19::chr1:236046629..236046653,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1130|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1968|TSSclassifier=N|UniProt=F5H074|association_with_transcript=218bp_to_ENST00000536965_5end|description=CAGE_peak_7_at_LYST_5end|id=chr1:236046629..236046653,-|ontology_enrichment_celltype=CL:0000990!1.14e-11!8;CL:0000148!2.33e-10!10;CL:0000541!2.33e-10!10;CL:0000451!2.79e-09!10;CL:0000453!8.06e-08!5;CL:0002567!1.15e-07!3;CL:0000147!5.41e-07!14|ontology_enrichment_celltype_v019=CL:0000148;1.31e-38;10!CL:0000990;4.87e-32;8!CL:0000147;2.15e-27;14!CL:0000453;5.98e-27;5!CL:0000451;3.78e-26;10!CL:0002567;4.21e-25;3!CL:0000710;5.76e-19;20!CL:0000075;7.42e-14;27!CL:0000840;1.54e-12;5!CL:0002077;1.08e-09;34!CL:0002566;1.99e-09;1|ontology_enrichment_celltype_v019_2=CL:0000148,1.35e-38,10;CL:0000541,1.35e-38,10;CL:0000990,4.88e-32,8;CL:0000147,2.19e-27,14;CL:0000453,6.39e-27,5;CL:0000451,3.78e-26,10;CL:0002567,3.88e-25,3;CL:0000710,5.84e-19,20;CL:0000075,7.50e-14,27;CL:0000840,1.48e-12,5;CL:0001029,1.48e-12,5;CL:0000333,7.10e-11,41;CL:0002077,7.68e-11,34;CL:0002566,1.99e-09,1;CL:0000133,2.99e-09,59;CL:0000221,2.15e-07,72|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:1909;3.98e-17;2!DOID:6193;1.12e-09;1!DOID:0060060;1.99e-09;1!DOID:0060061;1.99e-09;1!DOID:8691;1.99e-09;1!DOID:5662;4.50e-09;1|ontology_enrichment_disease_v019_2=DOID:1909,3.98e-17,2;DOID:6193,1.12e-09,1;DOID:0060060,1.84e-09,1;DOID:0060061,1.84e-09,1;DOID:8691,1.84e-09,1;DOID:5662,4.15e-09,1|ontology_enrichment_uberon=UBERON:0007023!7.90e-07!115|ontology_enrichment_uberon_v019=UBERON:0001905;1.62e-17;2!UBERON:0002757;1.62e-17;2!UBERON:0010134;1.62e-17;2!UBERON:0005408;1.62e-17;2!UBERON:0001899;1.62e-17;2!UBERON:0003296;3.26e-09;4!UBERON:0010133;3.26e-09;4!UBERON:0002784;3.26e-09;4|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.62e-17,2;UBERON:0002757,1.62e-17,2;UBERON:0010134,1.62e-17,2;UBERON:0005408,1.62e-17,2;UBERON:0001899,1.62e-17,2;UBERON:0003296,3.26e-09,4;UBERON:0010133,3.26e-09,4;UBERON:0002784,3.26e-09,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0.232429036905685,0,0.309706370895104,0,0,0,0.344745680736619,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0,0,0,0,0,0,0,0.97364218096405,1.21890816109487,1.86141144726411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448346041655403,0.117434498643765,0,0,0.204154171254893,0,0.619954687054593,0,0,0,0,0,0,0.277064115484183,0.438977620880838,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0.985326475791887,0,0.207328115540772,0.144119953416961,0,5.27032522625003,13.751583320098,4.68869788840188,6.84289784090821,3.59896224461632,2.10240140490742,5.14487578735041,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,1.30294473717494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01637849688985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73856760253663,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0.689486746482929,0.291604613383254,0,0,0,0,1.3269511191747,0.886642856860642,0.219385397153973,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889563386041866,0.370691816839509,0.522109747527277,0.202203398942031,0,0,0,0,0.971121518136371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2110083054848,0,0,0,0.193978032976839,0,0,0.685209623233754,0,0.0633107959558787,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.2228852156715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0.2506898940227,0,0,0,0,0.122026264901963,0.250381861413,0,0,0.310482014706917,0,0,4.09452617362449,6.85116800507922,0,0,0,0.149254802886874,0,0,0.189403005275089,0.754703705257725,2.66943366478961,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,13.055640692239,9.56626850256214,13.4123623289792,0.327609848846413,0,0,5.59964708393804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0.781078098613847,0,0.0634158101939068,0,0,0,0,0,10.1783348816874,10.4247953887835,0,0,0,0,1.71488009437418,0.135939465953663,0.131545547125698,0,0,0.078493092850514,0,0,0,0,0.47775168788705,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0.297046400327086,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0,0,0.12729431655633,0,0,0,0.134704106029175,0,0.332660356546013,0,0.106727345877715,0,0,0,0,0,0,0,0.961705476909699|short_description=p7@LYST}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=1130 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1968 | |||
|TSSclassifier=N | |||
|UniProt=F5H074 | |||
|association_with_transcript=218bp_to_ENST00000536965_5end | |||
|description=CAGE_peak_7_at_LYST_5end | |||
|id=chr1:236046629..236046653,- | |||
|ontology_enrichment_celltype=CL:0000990!1.14e-11!8;CL:0000148!2.33e-10!10;CL:0000541!2.33e-10!10;CL:0000451!2.79e-09!10;CL:0000453!8.06e-08!5;CL:0002567!1.15e-07!3;CL:0000147!5.41e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.31e-38;10!CL:0000990;4.87e-32;8!CL:0000147;2.15e-27;14!CL:0000453;5.98e-27;5!CL:0000451;3.78e-26;10!CL:0002567;4.21e-25;3!CL:0000710;5.76e-19;20!CL:0000075;7.42e-14;27!CL:0000840;1.54e-12;5!CL:0002077;1.08e-09;34!CL:0002566;1.99e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.35e-38,10;CL:0000541,1.35e-38,10;CL:0000990,4.88e-32,8;CL:0000147,2.19e-27,14;CL:0000453,6.39e-27,5;CL:0000451,3.78e-26,10;CL:0002567,3.88e-25,3;CL:0000710,5.84e-19,20;CL:0000075,7.50e-14,27;CL:0000840,1.48e-12,5;CL:0001029,1.48e-12,5;CL:0000333,7.10e-11,41;CL:0002077,7.68e-11,34;CL:0002566,1.99e-09,1;CL:0000133,2.99e-09,59;CL:0000221,2.15e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;3.98e-17;2!DOID:6193;1.12e-09;1!DOID:0060060;1.99e-09;1!DOID:0060061;1.99e-09;1!DOID:8691;1.99e-09;1!DOID:5662;4.50e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,3.98e-17,2;DOID:6193,1.12e-09,1;DOID:0060060,1.84e-09,1;DOID:0060061,1.84e-09,1;DOID:8691,1.84e-09,1;DOID:5662,4.15e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.90e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.62e-17;2!UBERON:0002757;1.62e-17;2!UBERON:0010134;1.62e-17;2!UBERON:0005408;1.62e-17;2!UBERON:0001899;1.62e-17;2!UBERON:0003296;3.26e-09;4!UBERON:0010133;3.26e-09;4!UBERON:0002784;3.26e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.62e-17,2;UBERON:0002757,1.62e-17,2;UBERON:0010134,1.62e-17,2;UBERON:0005408,1.62e-17,2;UBERON:0001899,1.62e-17,2;UBERON:0003296,3.26e-09,4;UBERON:0010133,3.26e-09,4;UBERON:0002784,3.26e-09,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0.232429036905685,0,0.309706370895104,0,0,0,0.344745680736619,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0,0,0,0,0,0,0,0.97364218096405,1.21890816109487,1.86141144726411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448346041655403,0.117434498643765,0,0,0.204154171254893,0,0.619954687054593,0,0,0,0,0,0,0.277064115484183,0.438977620880838,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0.985326475791887,0,0.207328115540772,0.144119953416961,0,5.27032522625003,13.751583320098,4.68869788840188,6.84289784090821,3.59896224461632,2.10240140490742,5.14487578735041,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,1.30294473717494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01637849688985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73856760253663,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0.689486746482929,0.291604613383254,0,0,0,0,1.3269511191747,0.886642856860642,0.219385397153973,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889563386041866,0.370691816839509,0.522109747527277,0.202203398942031,0,0,0,0,0.971121518136371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2110083054848,0,0,0,0.193978032976839,0,0,0.685209623233754,0,0.0633107959558787,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.2228852156715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0.2506898940227,0,0,0,0,0.122026264901963,0.250381861413,0,0,0.310482014706917,0,0,4.09452617362449,6.85116800507922,0,0,0,0.149254802886874,0,0,0.189403005275089,0.754703705257725,2.66943366478961,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,13.055640692239,9.56626850256214,13.4123623289792,0.327609848846413,0,0,5.59964708393804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0.781078098613847,0,0.0634158101939068,0,0,0,0,0,10.1783348816874,10.4247953887835,0,0,0,0,1.71488009437418,0.135939465953663,0.131545547125698,0,0,0.078493092850514,0,0,0,0,0.47775168788705,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0.297046400327086,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0,0,0.12729431655633,0,0,0,0.134704106029175,0,0.332660356546013,0,0.106727345877715,0,0,0,0,0,0,0,0.961705476909699 | |||
|short_description=p7@LYST | |||
}} |
Revision as of 04:23, 12 September 2013
Short description: | p7@LYST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_LYST_5end |
Coexpression cluster: | NA |
Association with transcript: | 218bp_to_ENST00000536965_5end |
EntrezGene: | LYST |
HGNC: | 1968 |
UniProt: | F5H074 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.35e-38 | 10 |
melanoblast | 1.35e-38 | 10 |
conventional dendritic cell | 4.88e-32 | 8 |
pigment cell | 2.19e-27 | 14 |
Langerhans cell | 6.39e-27 | 5 |
dendritic cell | 3.78e-26 | 10 |
light melanocyte | 3.88e-25 | 3 |
neurecto-epithelial cell | 5.84e-19 | 20 |
columnar/cuboidal epithelial cell | 7.50e-14 | 27 |
immature conventional dendritic cell | 1.48e-12 | 5 |
common dendritic progenitor | 1.48e-12 | 5 |
migratory neural crest cell | 7.10e-11 | 41 |
ecto-epithelial cell | 7.68e-11 | 34 |
dark melanocyte | 1.99e-09 | 1 |
neurectodermal cell | 2.99e-09 | 59 |
ectodermal cell | 2.15e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.62e-17 | 2 |
regional part of epithalamus | 1.62e-17 | 2 |
secretory circumventricular organ | 1.62e-17 | 2 |
circumventricular organ | 1.62e-17 | 2 |
epithalamus | 1.62e-17 | 2 |
gland of diencephalon | 3.26e-09 | 4 |
neuroendocrine gland | 3.26e-09 | 4 |
regional part of diencephalon | 3.26e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.98e-17 | 2 |
epithelioid sarcoma | 1.12e-09 | 1 |
non-Hodgkin lymphoma | 1.84e-09 | 1 |
cutaneous T cell lymphoma | 1.84e-09 | 1 |
mycosis fungoides | 1.84e-09 | 1 |
pleomorphic carcinoma | 4.15e-09 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.