FFCP PHASE1:Hg19::chr1:246887391..246887408,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=51097|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24275|TSSclassifier=S|UniProt=E9PEA8,Q8NBX0|association_with_transcript=13bp_to_ENST00000366509,NM_016002,uc001ibr.2_5end|coexpression_cluster_id=C3958|description=CAGE_peak_3_at_SCCPDH_5end|id=chr1:246887391..246887408,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000182;2.78e-09;12|ontology_enrichment_celltype_v019_2=CL:0000182,1.09e-09,12|ontology_enrichment_development_v019=UBERON:0008947;1.25e-07;29|ontology_enrichment_disease=DOID:162!2.85e-07!235;DOID:14566!7.66e-07!239|ontology_enrichment_disease_v019=DOID:5093;5.02e-07;4!DOID:1612;5.02e-07;4|ontology_enrichment_disease_v019_2=DOID:5093,6.83e-07,4;DOID:1612,6.83e-07,4|ontology_enrichment_uberon=UBERON:0001737!5.34e-08!9|ontology_enrichment_uberon_v019=UBERON:0001737;6.74e-17;9!UBERON:0001557;6.74e-17;9!UBERON:0002107;3.34e-08;19!UBERON:0006925;3.34e-08;19|ontology_enrichment_uberon_v019_2=UBERON:0001737,7.17e-17,9;UBERON:0002107,1.68e-08,19;UBERON:0006925,1.68e-08,19;UBERON:0008836,1.68e-08,19;UBERON:0008835,5.62e-07,22;UBERON:0003894,5.62e-07,22;UBERON:0007499,7.74e-07,25|phase1_expression=0.363356758541113,3.42560838225573,0.422863212287913,0,0.446961094427288,0,0,0,1.56711376919903,0.245733936501509,0.697801167972428,0.655324116390517,0.263766978228454,0.247532705920093,0,0,0,0.730310090387373,0,0.369363174230364,0,0.626909442956176,0.286235987131057,0.273748850145768,0.502170558379211,0,0.164201178899891,0,6.68719270643137,0,0.619264493264304,0,0,0,0.387336002901508,0.142169232487422,2.05520307534393,0.553995408531877,0,0,0.447830948479849,0,1.03030227053675,0,0,0,0,0,0,0,0.256160706529101,0,0.344745680736619,0,0,0,0.272906150057846,0.224723484445085,0.306083892370903,0,0.639337125799041,0,0,0,0,0,0,0,0.521482918420201,0,0.605399502633369,0,0,0,0.212604299965044,0,0.112328631146495,0.300353785683013,0.64290234678832,0,0,0.365328307529268,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68280343881454,0.255725123687061,3.61439152384566,0.50133791063589,1.44846518960824,0,0,0.661743720148475,1.33037638477538,0.527008714158756,0.589405839739707,0,0,0.324547393654683,0,0.132957960518865,0,0,0,0.993812036833525,0,1.04142150482278,0,0.419499436209906,0.550236083880135,0.835979866147242,0.258416759169329,0,0,0.805658634218294,0.760272105718513,0.732186172644509,0.735326160691737,0,1.07159673940896,0.898117490504679,0.563057402416611,0,0.949265659568129,1.09921046358244,0,0,0,0.993943903390637,0.506522046658319,0.264818361626438,0,0.354668382198357,0.560677600142307,0,0.74000264525148,0.311211035399766,0.404132016209064,0,0.302714855289863,0,0.468642863667593,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0.421352420106746,0.204154171254893,0.122834317311768,0,0,0.247266929278557,0,0,0.168336113954066,0.250237039743928,0.277064115484183,1.31693286264251,0.919463387397059,0.751190294532984,0.340296549480063,0.358779271377724,0.640672166455702,0.423863802319124,0.600182192168805,0.618315175430633,0,0.37223371266318,0.168776332241266,0.487185025805993,0,0.736399189138395,0.161646056818812,0.355009592516614,0.403008392910561,0.847802961552438,0.193260853163297,0,0,0.609868530647977,0.927708378250397,0.580969714347592,0.621966330092223,1.00928340350251,2.55484151353081,0,0,0,0,0,14.7883500049805,16.3527149375759,12.2915625240576,15.9926260461971,14.5979227541912,13.7616959084436,16.3145882873799,14.5203884192756,11.9271618653381,1.4763109092493,1.40241773803446,0.8231480226628,0,17.7457048750563,1.96565443335525,3.54473944008842,0,0.983907508344908,0.343135620597051,0,0,0,0,0,0,0,0.231860809950154,0.352226082707465,0.433099343283221,0,0.190254152234598,7.11183958163348,9.4433477830436,0.246217006087397,0.234004265139238,0.297262324577456,0,0.335964256397719,0.141775097242386,0,0,0,0,0.352193736052904,0.414656231081544,0.144119953416961,0,2.79390734885544,2.29193055334967,1.17217447210047,0,1.54241239054985,0.901029173531752,0.285826432630578,0.336393253036082,0,0.5867062865676,0.387815147273333,0,0.845302752556,0.797814349754612,1.04007436911366,0.514414748524284,0,0.532844358032199,0.285955987316295,0.542621605391443,0,0.65147236858747,0,0,0.301439377059586,0,0.399891964728228,0,1.00451418286425,0,1.19812427745791,0,0,0.723906533337896,0.205476322550383,0.358121926479791,0.112085143993527,0,0,0.128343036279748,1.27047312111232,1.30139853857622,0.773288812777695,0.335032530668698,0.637938751653163,0,0,0,0,0,0.271265023699736,1.66376689224646,0.713715955188647,1.10391690523754,0.117141414992713,0,0,0,1.32845119707087,0.737476674166813,0.868836144680828,0,0,0.206768026122887,0.215714200818617,0.426910231213777,0.303127571446259,3.32870879020994,0.30239029332968,0,0.153461973288062,0.280660094433074,0.896974044789907,0.511707249066704,0.64341568457443,1.48418066444991,0.462629081407967,0.3551234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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=51097 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24275 | |||
|TSSclassifier=S | |||
|UniProt=E9PEA8,Q8NBX0 | |||
|association_with_transcript=13bp_to_ENST00000366509,NM_016002,uc001ibr.2_5end | |||
|coexpression_cluster_id=C3958 | |||
|description=CAGE_peak_3_at_SCCPDH_5end | |||
|id=chr1:246887391..246887408,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.78e-09;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.09e-09,12 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.25e-07;29 | |||
|ontology_enrichment_disease=DOID:162!2.85e-07!235;DOID:14566!7.66e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:5093;5.02e-07;4!DOID:1612;5.02e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,6.83e-07,4;DOID:1612,6.83e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001737!5.34e-08!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;6.74e-17;9!UBERON:0001557;6.74e-17;9!UBERON:0002107;3.34e-08;19!UBERON:0006925;3.34e-08;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,7.17e-17,9;UBERON:0002107,1.68e-08,19;UBERON:0006925,1.68e-08,19;UBERON:0008836,1.68e-08,19;UBERON:0008835,5.62e-07,22;UBERON:0003894,5.62e-07,22;UBERON:0007499,7.74e-07,25 | |||
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| |||
|short_description=p3@SCCPDH | |||
}} |
Revision as of 04:44, 12 September 2013
Short description: | p3@SCCPDH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SCCPDH_5end |
Coexpression cluster: | C3958_large_Hep2_Hepatocyte_testis_Basophils_spinal_mesothelioma |
Association with transcript: | 13bp_to_ENST00000366509, NM_016002, uc001ibr.2_5end |
EntrezGene: | SCCPDH |
HGNC: | 24275 |
UniProt: | E9PEA8Q8NBX0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.09e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
larynx | 7.17e-17 | 9 |
liver | 1.68e-08 | 19 |
digestive gland | 1.68e-08 | 19 |
liver bud | 1.68e-08 | 19 |
hepatic diverticulum | 5.62e-07 | 22 |
liver primordium | 5.62e-07 | 22 |
epithelial sac | 7.74e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 6.83e-07 | 4 |
breast cancer | 6.83e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.