FFCP PHASE1:Hg19::chr1:86043743..86043752,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23576|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2715|TSSclassifier=S|UniProt=|association_with_transcript=80bp_to_ENST00000467530_5end|coexpression_cluster_id=C934|description=CAGE_peak_25_at_DDAH1_5end|id=chr1:86043743..86043752,-|ontology_enrichment_celltype=CL:0000055!4.76e-25!180;CL:0000057!9.08e-18!75;CL:0002620!7.83e-13!23;CL:0000680!7.82e-09!57;CL:0000056!7.82e-09!57;CL:0000355!7.82e-09!57;CL:0000136!1.87e-08!15;CL:0000187!2.37e-07!54;CL:0000048!2.43e-07!430;CL:0000723!5.90e-07!436;CL:0000393!7.03e-07!60;CL:0000211!7.03e-07!60;CL:0002334!9.02e-07!12|ontology_enrichment_celltype_v019=CL:0002579;6.73e-13;3!CL:0002615;7.88e-13;3!CL:0002580;8.32e-12;3!CL:0002334;3.78e-11;12!CL:0000136;1.96e-10;13!CL:0002561;3.41e-09;2!CL:0002620;4.13e-09;23!CL:0002617;1.98e-08;2!CL:0002559;4.81e-08;5|ontology_enrichment_celltype_v019_2=CL:0000057,2.36e-13,76;CL:0002615,5.57e-13,3;CL:0002579,7.96e-13,3;CL:0002580,3.50e-12,3;CL:0000136,6.44e-12,15;CL:0002334,2.68e-11,12;CL:0002561,2.49e-09,2;CL:0002620,5.52e-09,23;CL:0002617,3.01e-08,2;CL:0002559,3.96e-08,5|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:2394,8.62e-07,14|ontology_enrichment_uberon=UBERON:0000914!3.39e-12!83;UBERON:0002329!3.39e-12!83;UBERON:0003077!3.39e-12!83;UBERON:0003059!3.39e-12!83;UBERON:0007282!3.39e-12!83;UBERON:0009618!3.39e-12!83;UBERON:0007285!3.39e-12!83;UBERON:0004290!7.38e-10!70;UBERON:0002199!4.34e-09!45;UBERON:0002416!4.34e-09!45;UBERON:0000486!8.38e-09!82;UBERON:0002385!1.83e-08!63;UBERON:0001015!1.83e-08!63;UBERON:0000383!1.83e-08!63;UBERON:0003102!2.88e-08!95;UBERON:0001134!4.54e-08!61;UBERON:0002036!4.54e-08!61;UBERON:0003082!4.54e-08!61;UBERON:0005256!5.29e-08!143;UBERON:0002097!7.62e-08!40;UBERON:0004457!1.21e-07!12;UBERON:0000042!1.21e-07!12;UBERON:0000475!1.27e-07!365;UBERON:0003688!3.14e-07!6;UBERON:0002358!3.14e-07!6;UBERON:0003684!3.14e-07!6;UBERON:0001178!3.14e-07!6|ontology_enrichment_uberon_v019=UBERON:0003688;5.65e-24;6!UBERON:0002358;5.65e-24;6!UBERON:0003684;5.65e-24;6!UBERON:0001178;5.65e-24;6!UBERON:0004457;9.31e-16;9!UBERON:0000042;9.31e-16;9!UBERON:0002097;1.88e-09;41!UBERON:0005933;3.41e-09;2!UBERON:0005942;3.41e-09;2!UBERON:0005932;3.41e-09;2!UBERON:0000310;3.93e-09;10!UBERON:0001443;2.82e-08;11!UBERON:0002073;4.81e-08;5|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.73e-24,6;UBERON:0002358,4.73e-24,6;UBERON:0003684,4.73e-24,6;UBERON:0001178,4.73e-24,6;UBERON:0004457,1.12e-11,12;UBERON:0000042,1.12e-11,12;UBERON:0002097,6.65e-11,41;UBERON:0002199,1.91e-09,46;UBERON:0002416,1.91e-09,46;UBERON:0005933,2.49e-09,2;UBERON:0005942,2.49e-09,2;UBERON:0005932,2.49e-09,2;UBERON:0000310,3.18e-09,10;UBERON:0001443,2.34e-08,11;UBERON:0002073,3.96e-08,5;UBERON:0005086,3.96e-08,5|phase1_expression=1.2717486548939,1.2846031433459,3.10099689011137,3.00219895059391,1.78784437770915,3.48935409640147,0,0.631719873426831,0.522371256399677,0.245733936501509,0,0,0,0.247532705920093,0,0,0.602694528023977,0.730310090387373,0,0.123121058076788,0,0.313454721478088,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0.361439152384566,1.00267582127178,0.579386075843295,1.5905718941022,0.973269740605272,0.283604451492204,0.221729397462564,0.351339142772504,0.261958150995425,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0.112611480483322,0,0.949265659568129,0.183201743930407,0,0,0,0,1.01304409331664,3.97227542439656,0.573673241497627,0.354668382198357,0.560677600142307,0,0.49333509683432,0.311211035399766,0.404132016209064,0,0,0,0,0.624320153660641,0,1.49448680551801,0.469737994575059,0.647491777472526,0.561803226808994,0.408308342509787,0,0,1.18800285728205,0.494533858557114,0,0,0.168336113954066,0.375355559615893,0.554128230968366,0.877955241761676,2.45190236639216,0.300476117813194,0.226864366320042,0.358779271377724,0.85422955527427,1.27159140695737,0.600182192168805,0.412210116953756,1.28820270022815,1.11670113798954,1.18143432568886,0.779496041289589,1.51460264546469,1.01254888506529,0.323292113637624,0.710019185033229,1.81353776809752,0.339121184620975,0,0,0,0,0,0,0.10366105501537,0,0,4.69348596989448,0,0,2.78620756819187,2.88751792667834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.87192013766656,0.2933531432838,1.93907573636667,0,0,2.12750493267896,0,0.257207374262142,0,0,0.857867961948885,0,0.823240336780769,0.325736184293735,0.710783897485092,0,0.301439377059586,0.871533458600294,0.799783929456456,0,0,0,0.479249710983165,0,0,2.02693829334611,0.61642896765115,0.89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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23576 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2715 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=80bp_to_ENST00000467530_5end | |||
|coexpression_cluster_id=C934 | |||
|description=CAGE_peak_25_at_DDAH1_5end | |||
|id=chr1:86043743..86043752,- | |||
|ontology_enrichment_celltype=CL:0000055!4.76e-25!180;CL:0000057!9.08e-18!75;CL:0002620!7.83e-13!23;CL:0000680!7.82e-09!57;CL:0000056!7.82e-09!57;CL:0000355!7.82e-09!57;CL:0000136!1.87e-08!15;CL:0000187!2.37e-07!54;CL:0000048!2.43e-07!430;CL:0000723!5.90e-07!436;CL:0000393!7.03e-07!60;CL:0000211!7.03e-07!60;CL:0002334!9.02e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002579;6.73e-13;3!CL:0002615;7.88e-13;3!CL:0002580;8.32e-12;3!CL:0002334;3.78e-11;12!CL:0000136;1.96e-10;13!CL:0002561;3.41e-09;2!CL:0002620;4.13e-09;23!CL:0002617;1.98e-08;2!CL:0002559;4.81e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.36e-13,76;CL:0002615,5.57e-13,3;CL:0002579,7.96e-13,3;CL:0002580,3.50e-12,3;CL:0000136,6.44e-12,15;CL:0002334,2.68e-11,12;CL:0002561,2.49e-09,2;CL:0002620,5.52e-09,23;CL:0002617,3.01e-08,2;CL:0002559,3.96e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2394,8.62e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!3.39e-12!83;UBERON:0002329!3.39e-12!83;UBERON:0003077!3.39e-12!83;UBERON:0003059!3.39e-12!83;UBERON:0007282!3.39e-12!83;UBERON:0009618!3.39e-12!83;UBERON:0007285!3.39e-12!83;UBERON:0004290!7.38e-10!70;UBERON:0002199!4.34e-09!45;UBERON:0002416!4.34e-09!45;UBERON:0000486!8.38e-09!82;UBERON:0002385!1.83e-08!63;UBERON:0001015!1.83e-08!63;UBERON:0000383!1.83e-08!63;UBERON:0003102!2.88e-08!95;UBERON:0001134!4.54e-08!61;UBERON:0002036!4.54e-08!61;UBERON:0003082!4.54e-08!61;UBERON:0005256!5.29e-08!143;UBERON:0002097!7.62e-08!40;UBERON:0004457!1.21e-07!12;UBERON:0000042!1.21e-07!12;UBERON:0000475!1.27e-07!365;UBERON:0003688!3.14e-07!6;UBERON:0002358!3.14e-07!6;UBERON:0003684!3.14e-07!6;UBERON:0001178!3.14e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;5.65e-24;6!UBERON:0002358;5.65e-24;6!UBERON:0003684;5.65e-24;6!UBERON:0001178;5.65e-24;6!UBERON:0004457;9.31e-16;9!UBERON:0000042;9.31e-16;9!UBERON:0002097;1.88e-09;41!UBERON:0005933;3.41e-09;2!UBERON:0005942;3.41e-09;2!UBERON:0005932;3.41e-09;2!UBERON:0000310;3.93e-09;10!UBERON:0001443;2.82e-08;11!UBERON:0002073;4.81e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.73e-24,6;UBERON:0002358,4.73e-24,6;UBERON:0003684,4.73e-24,6;UBERON:0001178,4.73e-24,6;UBERON:0004457,1.12e-11,12;UBERON:0000042,1.12e-11,12;UBERON:0002097,6.65e-11,41;UBERON:0002199,1.91e-09,46;UBERON:0002416,1.91e-09,46;UBERON:0005933,2.49e-09,2;UBERON:0005942,2.49e-09,2;UBERON:0005932,2.49e-09,2;UBERON:0000310,3.18e-09,10;UBERON:0001443,2.34e-08,11;UBERON:0002073,3.96e-08,5;UBERON:0005086,3.96e-08,5 | |||
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| |||
|short_description=p25@DDAH1 | |||
}} |
Revision as of 06:59, 12 September 2013
Short description: | p25@DDAH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_25_at_DDAH1_5end |
Coexpression cluster: | C934_basal_Preadipocyte_Adipocyte_Fibroblast_Mesenchymal_spindle_Myoblast |
Association with transcript: | 80bp_to_ENST00000467530_5end |
EntrezGene: | DDAH1 |
HGNC: | 2715 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.36e-13 | 76 |
adipocyte of omentum tissue | 5.57e-13 | 3 |
omentum preadipocyte | 7.96e-13 | 3 |
preadipocyte of the breast | 3.50e-12 | 3 |
fat cell | 6.44e-12 | 15 |
preadipocyte | 2.68e-11 | 12 |
outer root sheath cell | 2.49e-09 | 2 |
skin fibroblast | 5.52e-09 | 23 |
adipocyte of breast | 3.01e-08 | 2 |
hair follicle cell | 3.96e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
omentum | 4.73e-24 | 6 |
peritoneum | 4.73e-24 | 6 |
abdominal cavity | 4.73e-24 | 6 |
visceral peritoneum | 4.73e-24 | 6 |
cavity lining | 1.12e-11 | 12 |
serous membrane | 1.12e-11 | 12 |
skin of body | 6.65e-11 | 41 |
integument | 1.91e-09 | 46 |
integumental system | 1.91e-09 | 46 |
hair root sheath | 2.49e-09 | 2 |
hair outer root sheath | 2.49e-09 | 2 |
bulb of hair follicle | 2.49e-09 | 2 |
breast | 3.18e-09 | 10 |
chest | 2.34e-08 | 11 |
hair follicle | 3.96e-08 | 5 |
hair follicle placode | 3.96e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 8.62e-07 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.