FFCP PHASE1:Hg19::chr20:44521855..44521887,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5476|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9251|TSSclassifier=N|UniProt=|association_with_transcript=255bp_to_ENST00000493522_5end|coexpression_cluster_id=C1869|description=CAGE_peak_4_at_CTSA_5end|id=chr20:44521855..44521887,+|ontology_enrichment_celltype=CL:0000055!7.91e-08!180;CL:0000222!2.67e-07!119;CL:0000048!5.49e-07!430|ontology_enrichment_celltype_v019=CL:0000473;7.13e-07;39!CL:0000234;7.13e-07;39|ontology_enrichment_celltype_v019_2=CL:0000048,7.80e-09,427;CL:0000723,4.25e-08,433;CL:0000034,3.54e-07,441;CL:0002320,5.75e-07,361|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!2.08e-09!448;UBERON:0004120!2.08e-09!448;UBERON:0006603!2.08e-09!448;UBERON:0002204!9.63e-08!167;UBERON:0003081!6.99e-07!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0000926,1.76e-12,315;UBERON:0004120,1.76e-12,315;UBERON:0006603,1.76e-12,315;UBERON:0002204,5.98e-09,167;UBERON:0003081,1.38e-07,203;UBERON:0002384,5.97e-07,371|phase1_expression=1.81678379270557,7.92171938396638,1.40954404095971,8.00586386825043,5.81049422755474,6.97870819280295,2.53299878168311,1.89515962028049,1.82829939739887,0.245733936501509,1.39560233594486,0.218441372130172,1.58260186937072,1.60896258848061,2.65117900582333,8.0679017574213,3.61616716814386,2.19093027116212,3.41552959153355,0.246242116153576,1.83600622119828,0.313454721478088,0.572471974262113,0.547497700291537,0.502170558379211,0.382067028739756,0.328402357799783,0.157421562627358,0,0.767658796194425,0.464448369948228,0.919421224478927,0.30120591877825,0,0.0774672005803016,0.142169232487422,0,0.553995408531877,2.60707781711184,1.30206522429511,2.01523926815932,2.59114932815184,1.28787783817093,2.76256653681173,2.26725566213286,0.727752183563449,2.55671940596253,1.6446715520873,0.309706370895104,4.89077066947656,1.5369642391746,1.6553756092201,3.44745680736619,1.93645405075148,2.70852973188684,3.76484679085209,0.545812300115692,1.34834090667051,5.50951006267625,0.962787081228281,3.19668562899521,5.93732340336089,1.19678194572979,1.27867425159808,5.5139755339431,0,0,2.00998932205395,2.08593167368081,1.3031330682307,0.605399502633369,1.10483290796269,0.632924774881769,0,1.70083439972035,0.419317291016752,1.23561494261145,1.05123824989054,0,0.285012743741249,0.79566670879636,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,1.17447437874188,0,0,0,0.263384084775077,0,0.786021525498329,0,0,0,0,0,1.11410456885174,0.883817722424512,0.886135578334485,0.270803863765016,0.896639238079726,1.04047478047903,1.31550323682941,0,0,0.14828656316206,0.535081656179426,0,0.339928028092699,0,0.34362744548263,0.253019692019503,0,0,0.950452044448374,0.301150238155546,0.255973222308837,0,0.236777252044017,0.821127996921047,0.403213486449465,1.06976078313403,0.434473211648397,2.43806866313962,3.35350429851818,0.767175371061182,0.361439152384566,1.00267582127178,3.47631645505977,1.5905718941022,0.973269740605272,0.378139268656271,1.55210578223795,0.527008714158756,0.72038491523742,0,0.370784442784429,1.9472843619281,0.522389211897802,5.05240249971688,0.238490624305342,0,0,0,0,0.694281003215189,1.13061588384802,0.838998872419812,2.20094433552054,1.67195973229448,1.03366703667732,1.42306505074684,1.33888245105868,0.805658634218294,0.760272105718513,2.19655851793353,0.367663080345869,8.1014194788176,0,0.673588117878509,0.450445921933289,0,1.89853131913626,0.732806975721629,0,0,0,1.49091585508596,2.27934920996244,0.794455084879313,10.8997915884549,3.54668382198357,0,1.06748995729705,5.67335361359468,0.311211035399766,2.96363478553314,0.653847612453835,0.302714855289863,0,0,1.87296046098192,0,1.34503812496621,0.939475989150119,0.809364721840658,0.421352420106746,0.816616685019573,1.10550885580591,1.23990937410919,2.37600571456411,5.19260551484969,0.910161361938026,0,0.336672227908132,1.50142223846357,0.277064115484183,0.438977620880838,3.98434134538726,2.55404700141215,0.453728732640084,1.4351170855109,1.92201649936711,2.11931901159562,2.10063767259082,1.44273540933814,1.8034837803194,1.67505170698431,1.5189869901714,0.68205903612839,1.00973509697646,0.920498986422993,3.07127507955743,4.26011511019937,0.403008392910561,1.01736355386293,0.57978255948989,0.545492241181669,0,0.731842236777572,0.265059536642971,0.232387885739037,0.310983165046111,0.252320850875628,0,0,3.85944562915731,0,6.03678306441573,2.88751792667834,0.828147600278907,1.34867752062481,0.964044119533928,0.55146986366197,0.871517776369625,0.237270619111097,0.404493924480493,0.392442930250692,1.92373578473195,2.95262181849859,2.80483547606892,0,2.94017422771084,6.33775174109154,0,0.590789906681404,0,0.983907508344908,0.514703430895577,0.109750285408626,0,0.201057944823262,0.277765335475589,0.325808305310325,0,0,0.463721619900307,0.469634776943287,0.577465791044295,2.77791307545966,1.33177906564219,0.790204397959275,0.85848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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5476 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9251 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=255bp_to_ENST00000493522_5end | |||
|coexpression_cluster_id=C1869 | |||
|description=CAGE_peak_4_at_CTSA_5end | |||
|id=chr20:44521855..44521887,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.91e-08!180;CL:0000222!2.67e-07!119;CL:0000048!5.49e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000473;7.13e-07;39!CL:0000234;7.13e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,7.80e-09,427;CL:0000723,4.25e-08,433;CL:0000034,3.54e-07,441;CL:0002320,5.75e-07,361 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!2.08e-09!448;UBERON:0004120!2.08e-09!448;UBERON:0006603!2.08e-09!448;UBERON:0002204!9.63e-08!167;UBERON:0003081!6.99e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
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| |||
|short_description=p4@CTSA | |||
}} |
Revision as of 08:45, 12 September 2013
Short description: | p4@CTSA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_CTSA_5end |
Coexpression cluster: | C1869_Monocytederived_leiomyoma_Osteoblast_Fibroblast_Prostate_mixed_tenocyte |
Association with transcript: | 255bp_to_ENST00000493522_5end |
EntrezGene: | CTSA |
HGNC: | 9251 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 7.80e-09 | 427 |
somatic stem cell | 4.25e-08 | 433 |
stem cell | 3.54e-07 | 441 |
connective tissue cell | 5.75e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 1.76e-12 | 315 |
mesoderm-derived structure | 1.76e-12 | 315 |
presumptive mesoderm | 1.76e-12 | 315 |
musculoskeletal system | 5.98e-09 | 167 |
lateral plate mesoderm | 1.38e-07 | 203 |
connective tissue | 5.97e-07 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.