FFCP PHASE1:Hg19::chr22:37505588..37505607,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=164656|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16517|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000406856,uc003aqt.1_5end|coexpression_cluster_id=C5|description=CAGE_peak_2_at_TMPRSS6_5end|id=chr22:37505588..37505607,-|ontology_enrichment_celltype=CL:0000181!1.99e-21!12;CL:0000417!1.99e-21!12;CL:0000668!1.99e-21!12;CL:0000414!1.99e-21!12;CL:0000412!1.99e-21!12;CL:0000182!1.99e-21!12;CL:0002541!9.10e-11!3;CL:0000313!2.64e-08!1|ontology_enrichment_celltype_v019=CL:0002541;6.92e-27;3!CL:0000182;1.32e-15;12!CL:0002535;3.02e-11;2|ontology_enrichment_celltype_v019_2=CL:0002541,6.92e-27,3;CL:0000182,1.29e-15,12;CL:0002535,3.02e-11,2|ontology_enrichment_development_v019=UBERON:0004161;3.25e-08;11!UBERON:0009497;4.39e-07;13|ontology_enrichment_disease=DOID:2152!2.64e-08!1|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!1.29e-23!19;UBERON:0006925!1.29e-23!19;UBERON:0008836!1.29e-23!19;UBERON:0005057!2.96e-21!26;UBERON:0008835!3.02e-20!22;UBERON:0003894!3.02e-20!22;UBERON:0009854!2.56e-19!23;UBERON:0007499!1.10e-17!25;UBERON:0009497!1.10e-17!25;UBERON:0000015!1.10e-17!25;UBERON:0002423!1.10e-17!25;UBERON:0006235!1.10e-17!25;UBERON:0004161!1.10e-17!25;UBERON:0009856!5.81e-17!26;UBERON:0002365!4.79e-14!31;UBERON:0002330!4.79e-14!31;UBERON:0002368!2.59e-12!35;UBERON:0000476!9.10e-11!3;UBERON:0000920!9.10e-11!3;UBERON:0003124!8.47e-10!7;UBERON:0003929!1.38e-09!54;UBERON:0000949!2.52e-09!45;UBERON:0005172!2.60e-09!55;UBERON:0005173!2.60e-09!55;UBERON:0006122!1.37e-08!1;UBERON:0002146!2.29e-08!1;UBERON:0005623!2.29e-08!1;UBERON:0005631!2.34e-08!14;UBERON:0000158!2.34e-08!14;UBERON:0004911!2.64e-08!1;UBERON:0002417!2.94e-08!61;UBERON:0000916!2.94e-08!61;UBERON:0002530!7.61e-07!59|ontology_enrichment_uberon_v019=UBERON:0003124;6.92e-27;3!UBERON:0000920;6.92e-27;3!UBERON:0002107;2.79e-26;19!UBERON:0006925;2.79e-26;19!UBERON:0002423;4.88e-20;25!UBERON:0002365;3.64e-16;31!UBERON:0002330;3.64e-16;31!UBERON:0002368;5.37e-14;33!UBERON:0006955;3.02e-11;2!UBERON:0004801;3.02e-11;2!UBERON:0000949;3.25e-10;43!UBERON:0005631;8.96e-09;10!UBERON:0000158;8.96e-09;10!UBERON:0005172;1.96e-07;52!UBERON:0005173;1.96e-07;52|ontology_enrichment_uberon_v019_2=UBERON:0000920,6.92e-27,3;UBERON:0002107,2.72e-26,19;UBERON:0006925,2.72e-26,19;UBERON:0008836,2.72e-26,19;UBERON:0008835,9.57e-23,22;UBERON:0003894,9.57e-23,22;UBERON:0009854,9.09e-22,23;UBERON:0007499,4.78e-20,25;UBERON:0009497,4.78e-20,25;UBERON:0000015,4.78e-20,25;UBERON:0002423,4.78e-20,25;UBERON:0006235,4.78e-20,25;UBERON:0004161,4.78e-20,25;UBERON:0009856,2.77e-19,26;UBERON:0002365,3.29e-16,31;UBERON:0002330,3.29e-16,31;UBERON:0002368,2.23e-14,35;UBERON:0003124,3.96e-12,7;UBERON:0006955,3.02e-11,2;UBERON:0004801,3.02e-11,2;UBERON:0000949,3.25e-11,45;UBERON:0003929,2.31e-09,54;UBERON:0005172,2.31e-09,54;UBERON:0005173,2.31e-09,54;UBERON:0002530,1.42e-08,59;UBERON:0002417,1.97e-08,60;UBERON:0000916,1.97e-08,60|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,57.0397656698239,15.725235466842,6.49868897349544,0,0.737930631258681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.1470287122152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.3224593429274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,12.5966373927138,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,1.27600463892768,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0.429226048136571,0,0,0,0,0.630265458457789,0.576911008668165,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.5949096221713,7.95041333473328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=164656 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16517 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000406856,uc003aqt.1_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_2_at_TMPRSS6_5end | |||
|id=chr22:37505588..37505607,- | |||
|ontology_enrichment_celltype=CL:0000181!1.99e-21!12;CL:0000417!1.99e-21!12;CL:0000668!1.99e-21!12;CL:0000414!1.99e-21!12;CL:0000412!1.99e-21!12;CL:0000182!1.99e-21!12;CL:0002541!9.10e-11!3;CL:0000313!2.64e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0002541;6.92e-27;3!CL:0000182;1.32e-15;12!CL:0002535;3.02e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,6.92e-27,3;CL:0000182,1.29e-15,12;CL:0002535,3.02e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.25e-08;11!UBERON:0009497;4.39e-07;13 | |||
|ontology_enrichment_disease=DOID:2152!2.64e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.29e-23!19;UBERON:0006925!1.29e-23!19;UBERON:0008836!1.29e-23!19;UBERON:0005057!2.96e-21!26;UBERON:0008835!3.02e-20!22;UBERON:0003894!3.02e-20!22;UBERON:0009854!2.56e-19!23;UBERON:0007499!1.10e-17!25;UBERON:0009497!1.10e-17!25;UBERON:0000015!1.10e-17!25;UBERON:0002423!1.10e-17!25;UBERON:0006235!1.10e-17!25;UBERON:0004161!1.10e-17!25;UBERON:0009856!5.81e-17!26;UBERON:0002365!4.79e-14!31;UBERON:0002330!4.79e-14!31;UBERON:0002368!2.59e-12!35;UBERON:0000476!9.10e-11!3;UBERON:0000920!9.10e-11!3;UBERON:0003124!8.47e-10!7;UBERON:0003929!1.38e-09!54;UBERON:0000949!2.52e-09!45;UBERON:0005172!2.60e-09!55;UBERON:0005173!2.60e-09!55;UBERON:0006122!1.37e-08!1;UBERON:0002146!2.29e-08!1;UBERON:0005623!2.29e-08!1;UBERON:0005631!2.34e-08!14;UBERON:0000158!2.34e-08!14;UBERON:0004911!2.64e-08!1;UBERON:0002417!2.94e-08!61;UBERON:0000916!2.94e-08!61;UBERON:0002530!7.61e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;6.92e-27;3!UBERON:0000920;6.92e-27;3!UBERON:0002107;2.79e-26;19!UBERON:0006925;2.79e-26;19!UBERON:0002423;4.88e-20;25!UBERON:0002365;3.64e-16;31!UBERON:0002330;3.64e-16;31!UBERON:0002368;5.37e-14;33!UBERON:0006955;3.02e-11;2!UBERON:0004801;3.02e-11;2!UBERON:0000949;3.25e-10;43!UBERON:0005631;8.96e-09;10!UBERON:0000158;8.96e-09;10!UBERON:0005172;1.96e-07;52!UBERON:0005173;1.96e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,6.92e-27,3;UBERON:0002107,2.72e-26,19;UBERON:0006925,2.72e-26,19;UBERON:0008836,2.72e-26,19;UBERON:0008835,9.57e-23,22;UBERON:0003894,9.57e-23,22;UBERON:0009854,9.09e-22,23;UBERON:0007499,4.78e-20,25;UBERON:0009497,4.78e-20,25;UBERON:0000015,4.78e-20,25;UBERON:0002423,4.78e-20,25;UBERON:0006235,4.78e-20,25;UBERON:0004161,4.78e-20,25;UBERON:0009856,2.77e-19,26;UBERON:0002365,3.29e-16,31;UBERON:0002330,3.29e-16,31;UBERON:0002368,2.23e-14,35;UBERON:0003124,3.96e-12,7;UBERON:0006955,3.02e-11,2;UBERON:0004801,3.02e-11,2;UBERON:0000949,3.25e-11,45;UBERON:0003929,2.31e-09,54;UBERON:0005172,2.31e-09,54;UBERON:0005173,2.31e-09,54;UBERON:0002530,1.42e-08,59;UBERON:0002417,1.97e-08,60;UBERON:0000916,1.97e-08,60 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,57.0397656698239,15.725235466842,6.49868897349544,0,0.737930631258681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.1470287122152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.3224593429274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,12.5966373927138,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,1.27600463892768,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0.429226048136571,0,0,0,0,0.630265458457789,0.576911008668165,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.5949096221713,7.95041333473328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@TMPRSS6 | |||
}} |
Revision as of 11:49, 12 September 2013
Short description: | p2@TMPRSS6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_TMPRSS6_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000406856, uc003aqt.1_5end |
EntrezGene: | TMPRSS6 |
HGNC: | 16517 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 6.92e-27 | 3 |
hepatocyte | 1.29e-15 | 12 |
epithelial cell of cervix | 3.02e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 6.92e-27 | 3 |
liver | 2.72e-26 | 19 |
digestive gland | 2.72e-26 | 19 |
liver bud | 2.72e-26 | 19 |
hepatic diverticulum | 9.57e-23 | 22 |
liver primordium | 9.57e-23 | 22 |
digestive tract diverticulum | 9.09e-22 | 23 |
epithelial sac | 4.78e-20 | 25 |
epithelium of foregut-midgut junction | 4.78e-20 | 25 |
anatomical boundary | 4.78e-20 | 25 |
hepatobiliary system | 4.78e-20 | 25 |
foregut-midgut junction | 4.78e-20 | 25 |
septum transversum | 4.78e-20 | 25 |
sac | 2.77e-19 | 26 |
exocrine gland | 3.29e-16 | 31 |
exocrine system | 3.29e-16 | 31 |
endocrine gland | 2.23e-14 | 35 |
chorion | 3.96e-12 | 7 |
uterine epithelium | 3.02e-11 | 2 |
cervix epithelium | 3.02e-11 | 2 |
endocrine system | 3.25e-11 | 45 |
gut epithelium | 2.31e-09 | 54 |
abdomen element | 2.31e-09 | 54 |
abdominal segment element | 2.31e-09 | 54 |
gland | 1.42e-08 | 59 |
abdominal segment of trunk | 1.97e-08 | 60 |
abdomen | 1.97e-08 | 60 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.