FFCP PHASE1:Hg19::chr2:155554797..155554837,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3760|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6264|TSSclassifier=S|UniProt=P48549|association_with_transcript=0bp_to_ENST00000295101_5end|coexpression_cluster_id=C4134|description=CAGE_peak_3_at_KCNJ3_5end|id=chr2:155554797..155554837,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002553;2.63e-12;1|ontology_enrichment_celltype_v019_2=CL:0002553,2.63e-12,1|ontology_enrichment_development_v019=UBERON:0006215;5.37e-33;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!3.88e-42!115;UBERON:0001049!1.58e-40!57;UBERON:0005068!1.58e-40!57;UBERON:0006241!1.58e-40!57;UBERON:0007135!1.58e-40!57;UBERON:0002616!2.12e-36!59;UBERON:0003075!4.05e-35!86;UBERON:0007284!4.05e-35!86;UBERON:0002346!4.29e-33!90;UBERON:0002780!3.66e-32!41;UBERON:0001890!3.66e-32!41;UBERON:0006240!3.66e-32!41;UBERON:0000955!1.50e-31!69;UBERON:0006238!1.50e-31!69;UBERON:0003080!3.01e-31!42;UBERON:0001893!4.75e-30!34;UBERON:0005743!5.03e-29!86;UBERON:0001017!5.83e-29!82;UBERON:0002791!4.75e-28!33;UBERON:0002020!3.17e-27!34;UBERON:0003528!3.17e-27!34;UBERON:0001869!1.18e-26!32;UBERON:0002619!1.01e-25!22;UBERON:0000073!2.15e-25!94;UBERON:0001016!2.15e-25!94;UBERON:0001950!4.63e-25!20;UBERON:0003056!4.05e-23!61;UBERON:0000956!2.99e-22!25;UBERON:0000203!2.99e-22!25;UBERON:0000033!1.81e-17!123;UBERON:0000153!3.14e-16!129;UBERON:0007811!3.14e-16!129;UBERON:0000200!3.30e-16!6;UBERON:0004121!1.59e-15!169;UBERON:0000924!6.30e-15!173;UBERON:0006601!6.30e-15!173;UBERON:0000025!6.66e-11!194;UBERON:0004733!2.46e-10!12;UBERON:0002028!2.46e-10!12;UBERON:0007277!2.46e-10!12;UBERON:0003076!3.06e-10!15;UBERON:0003057!3.06e-10!15;UBERON:0000483!1.85e-09!309;UBERON:0004732!1.89e-09!13;UBERON:0000119!2.98e-09!312;UBERON:0002771!8.62e-09!3;UBERON:0004111!9.98e-09!241;UBERON:0001872!1.45e-08!5;UBERON:0001871!4.04e-08!7;UBERON:0002680!9.52e-08!9;UBERON:0001895!9.52e-08!9;UBERON:0010092!9.52e-08!9;UBERON:0002298!1.14e-07!8;UBERON:0000481!2.57e-07!347;UBERON:0000064!2.73e-07!219;UBERON:0000007!6.31e-07!2;UBERON:0000477!7.20e-07!286;UBERON:0000475!8.89e-07!365;UBERON:0001870!9.56e-07!2|ontology_enrichment_uberon_v019=UBERON:0000007;3.53e-22;2!UBERON:0002680;3.11e-19;9!UBERON:0001895;3.11e-19;9!UBERON:0002108;4.48e-19;4!UBERON:0002037;7.72e-17;6!UBERON:0002114;1.15e-14;2!UBERON:0004733;1.70e-14;12!UBERON:0002028;1.70e-14;12!UBERON:0004732;2.13e-13;13!UBERON:0003296;1.40e-11;4!UBERON:0010133;1.40e-11;4!UBERON:0000073;5.25e-09;53!UBERON:0002616;5.25e-09;53!UBERON:0000200;7.08e-08;6!UBERON:0001894;5.51e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0000007,3.93e-22,2;UBERON:0002680,3.49e-19,9;UBERON:0001895,3.49e-19,9;UBERON:0010092,3.49e-19,9;UBERON:0002108,4.34e-19,4;UBERON:0002037,7.72e-17,6;UBERON:0006215,7.72e-17,6;UBERON:0002114,1.15e-14,2;UBERON:0004733,1.86e-14,12;UBERON:0002028,1.86e-14,12;UBERON:0007277,1.86e-14,12;UBERON:0004732,2.31e-13,13;UBERON:0000073,1.26e-11,53;UBERON:0002616,1.26e-11,53;UBERON:0003076,1.30e-11,15;UBERON:0003057,1.30e-11,15;UBERON:0003296,1.47e-11,4;UBERON:0010133,1.47e-11,4;UBERON:0001049,5.78e-11,56;UBERON:0005068,5.78e-11,56;UBERON:0006241,5.78e-11,56;UBERON:0007135,5.78e-11,56;UBERON:0007023,1.50e-09,114;UBERON:0001017,4.01e-09,81;UBERON:0000955,9.40e-09,68;UBERON:0006238,9.40e-09,68;UBERON:0001016,4.09e-08,89;UBERON:0000200,6.16e-08,6;UBERON:0003075,3.12e-07,82;UBERON:0007284,3.12e-07,82;UBERON:0001894,5.67e-07,7;UBERON:0006222,5.67e-07,7;UBERON:0011216,6.03e-07,223;UBERON:0002346,7.42e-07,86|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0.242721043499027,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,2.51932747854276,0,0,0,0,0,0,0,0,0,0,0.834912883456661,0,0.7812832832557,0,0,0,0,0,0.689486746482929,0,2.08349993919951,0,0,12.20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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3760 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6264 | |||
|TSSclassifier=S | |||
|UniProt=P48549 | |||
|association_with_transcript=0bp_to_ENST00000295101_5end | |||
|coexpression_cluster_id=C4134 | |||
|description=CAGE_peak_3_at_KCNJ3_5end | |||
|id=chr2:155554797..155554837,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002553;2.63e-12;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,2.63e-12,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.37e-33;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.88e-42!115;UBERON:0001049!1.58e-40!57;UBERON:0005068!1.58e-40!57;UBERON:0006241!1.58e-40!57;UBERON:0007135!1.58e-40!57;UBERON:0002616!2.12e-36!59;UBERON:0003075!4.05e-35!86;UBERON:0007284!4.05e-35!86;UBERON:0002346!4.29e-33!90;UBERON:0002780!3.66e-32!41;UBERON:0001890!3.66e-32!41;UBERON:0006240!3.66e-32!41;UBERON:0000955!1.50e-31!69;UBERON:0006238!1.50e-31!69;UBERON:0003080!3.01e-31!42;UBERON:0001893!4.75e-30!34;UBERON:0005743!5.03e-29!86;UBERON:0001017!5.83e-29!82;UBERON:0002791!4.75e-28!33;UBERON:0002020!3.17e-27!34;UBERON:0003528!3.17e-27!34;UBERON:0001869!1.18e-26!32;UBERON:0002619!1.01e-25!22;UBERON:0000073!2.15e-25!94;UBERON:0001016!2.15e-25!94;UBERON:0001950!4.63e-25!20;UBERON:0003056!4.05e-23!61;UBERON:0000956!2.99e-22!25;UBERON:0000203!2.99e-22!25;UBERON:0000033!1.81e-17!123;UBERON:0000153!3.14e-16!129;UBERON:0007811!3.14e-16!129;UBERON:0000200!3.30e-16!6;UBERON:0004121!1.59e-15!169;UBERON:0000924!6.30e-15!173;UBERON:0006601!6.30e-15!173;UBERON:0000025!6.66e-11!194;UBERON:0004733!2.46e-10!12;UBERON:0002028!2.46e-10!12;UBERON:0007277!2.46e-10!12;UBERON:0003076!3.06e-10!15;UBERON:0003057!3.06e-10!15;UBERON:0000483!1.85e-09!309;UBERON:0004732!1.89e-09!13;UBERON:0000119!2.98e-09!312;UBERON:0002771!8.62e-09!3;UBERON:0004111!9.98e-09!241;UBERON:0001872!1.45e-08!5;UBERON:0001871!4.04e-08!7;UBERON:0002680!9.52e-08!9;UBERON:0001895!9.52e-08!9;UBERON:0010092!9.52e-08!9;UBERON:0002298!1.14e-07!8;UBERON:0000481!2.57e-07!347;UBERON:0000064!2.73e-07!219;UBERON:0000007!6.31e-07!2;UBERON:0000477!7.20e-07!286;UBERON:0000475!8.89e-07!365;UBERON:0001870!9.56e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;3.53e-22;2!UBERON:0002680;3.11e-19;9!UBERON:0001895;3.11e-19;9!UBERON:0002108;4.48e-19;4!UBERON:0002037;7.72e-17;6!UBERON:0002114;1.15e-14;2!UBERON:0004733;1.70e-14;12!UBERON:0002028;1.70e-14;12!UBERON:0004732;2.13e-13;13!UBERON:0003296;1.40e-11;4!UBERON:0010133;1.40e-11;4!UBERON:0000073;5.25e-09;53!UBERON:0002616;5.25e-09;53!UBERON:0000200;7.08e-08;6!UBERON:0001894;5.51e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,3.93e-22,2;UBERON:0002680,3.49e-19,9;UBERON:0001895,3.49e-19,9;UBERON:0010092,3.49e-19,9;UBERON:0002108,4.34e-19,4;UBERON:0002037,7.72e-17,6;UBERON:0006215,7.72e-17,6;UBERON:0002114,1.15e-14,2;UBERON:0004733,1.86e-14,12;UBERON:0002028,1.86e-14,12;UBERON:0007277,1.86e-14,12;UBERON:0004732,2.31e-13,13;UBERON:0000073,1.26e-11,53;UBERON:0002616,1.26e-11,53;UBERON:0003076,1.30e-11,15;UBERON:0003057,1.30e-11,15;UBERON:0003296,1.47e-11,4;UBERON:0010133,1.47e-11,4;UBERON:0001049,5.78e-11,56;UBERON:0005068,5.78e-11,56;UBERON:0006241,5.78e-11,56;UBERON:0007135,5.78e-11,56;UBERON:0007023,1.50e-09,114;UBERON:0001017,4.01e-09,81;UBERON:0000955,9.40e-09,68;UBERON:0006238,9.40e-09,68;UBERON:0001016,4.09e-08,89;UBERON:0000200,6.16e-08,6;UBERON:0003075,3.12e-07,82;UBERON:0007284,3.12e-07,82;UBERON:0001894,5.67e-07,7;UBERON:0006222,5.67e-07,7;UBERON:0011216,6.03e-07,223;UBERON:0002346,7.42e-07,86 | |||
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|short_description=p3@KCNJ3 | |||
}} |
Revision as of 14:09, 12 September 2013
Short description: | p3@KCNJ3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_KCNJ3_5end |
Coexpression cluster: | C4134_nonsmall_cerebellum_medulloblastoma_small_gastrointestinal_eye_pons |
Association with transcript: | 0bp_to_ENST00000295101_5end |
EntrezGene: | KCNJ3 |
HGNC: | 6264 |
UniProt: | P48549 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 2.63e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 3.93e-22 | 2 |
regional part of metencephalon | 3.49e-19 | 9 |
metencephalon | 3.49e-19 | 9 |
future metencephalon | 3.49e-19 | 9 |
small intestine | 4.34e-19 | 4 |
cerebellum | 7.72e-17 | 6 |
rhombic lip | 7.72e-17 | 6 |
duodenum | 1.15e-14 | 2 |
segmental subdivision of hindbrain | 1.86e-14 | 12 |
hindbrain | 1.86e-14 | 12 |
presumptive hindbrain | 1.86e-14 | 12 |
segmental subdivision of nervous system | 2.31e-13 | 13 |
regional part of nervous system | 1.26e-11 | 53 |
regional part of brain | 1.26e-11 | 53 |
posterior neural tube | 1.30e-11 | 15 |
chordal neural plate | 1.30e-11 | 15 |
gland of diencephalon | 1.47e-11 | 4 |
neuroendocrine gland | 1.47e-11 | 4 |
neural tube | 5.78e-11 | 56 |
neural rod | 5.78e-11 | 56 |
future spinal cord | 5.78e-11 | 56 |
neural keel | 5.78e-11 | 56 |
adult organism | 1.50e-09 | 114 |
central nervous system | 4.01e-09 | 81 |
brain | 9.40e-09 | 68 |
future brain | 9.40e-09 | 68 |
nervous system | 4.09e-08 | 89 |
gyrus | 6.16e-08 | 6 |
neural plate | 3.12e-07 | 82 |
presumptive neural plate | 3.12e-07 | 82 |
diencephalon | 5.67e-07 | 7 |
future diencephalon | 5.67e-07 | 7 |
organ system subdivision | 6.03e-07 | 223 |
neurectoderm | 7.42e-07 | 86 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.