FFCP PHASE1:Hg19::chr2:175411895..175411908,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=26bp_to_ENST00000442996,uc002uiw.2_5end|coexpression_cluster_id=C4146|description=CAGE_peak_2_at_ENST00000442996_5end,CAGE_peak_2_at_uc002uiw.2_5end|id=chr2:175411895..175411908,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002563;3.53e-14;4!CL:0002253;5.95e-13;2|ontology_enrichment_celltype_v019_2=CL:0002563,2.65e-14,4;CL:0002253,4.17e-13,2|ontology_enrichment_development_v019=UBERON:0003124;3.82e-07;1|ontology_enrichment_disease=DOID:14566!1.31e-26!239;DOID:162!3.17e-25!235;DOID:0050687!1.46e-22!143;DOID:305!3.83e-14!106;DOID:0050686!7.93e-13!137;DOID:8692!5.79e-10!31;DOID:299!1.49e-09!25;DOID:3095!3.06e-08!22;DOID:2994!3.06e-08!22;DOID:1036!1.28e-07!8;DOID:1240!2.68e-07!39|ontology_enrichment_disease_v019=DOID:1036;2.33e-17;8!DOID:4468;4.29e-12;2!DOID:3119;2.16e-10;14!DOID:299;2.29e-10;25!DOID:8692;4.52e-08;31!DOID:0050619;1.45e-07;1!DOID:1357;1.45e-07;1!DOID:1799;1.91e-07;1!DOID:10165;1.91e-07;1!DOID:1798;1.91e-07;1!DOID:3371;3.82e-07;1!DOID:4549;3.82e-07;1!DOID:5861;3.82e-07;1!DOID:6496;3.82e-07;1!DOID:5409;5.38e-07;4!DOID:0060085;7.08e-07;1!DOID:3165;7.08e-07;1!DOID:0060121;7.08e-07;1!DOID:2438;7.08e-07;1!DOID:4418;7.08e-07;1|ontology_enrichment_disease_v019_2=DOID:162,1.38e-17,235;DOID:1036,3.54e-17,8;DOID:14566,4.26e-17,239;DOID:0050686,1.57e-15,137;DOID:0050687,2.19e-13,143;DOID:4468,2.72e-12,2;DOID:305,1.13e-10,106;DOID:299,1.68e-10,25;DOID:3119,1.94e-10,14;DOID:8692,6.04e-08,31;DOID:0050619,1.46e-07,1;DOID:1357,1.46e-07,1;DOID:1799,1.98e-07,1;DOID:10165,1.98e-07,1;DOID:1798,1.98e-07,1;DOID:3371,3.82e-07,1;DOID:4549,3.82e-07,1;DOID:5861,3.82e-07,1;DOID:6496,3.82e-07,1;DOID:5409,5.96e-07,4;DOID:0060085,7.73e-07,1;DOID:3165,7.73e-07,1;DOID:0060121,7.73e-07,1;DOID:2438,7.73e-07,1;DOID:4418,7.73e-07,1|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0001242;3.53e-14;4!UBERON:0001262;3.53e-14;4!UBERON:0004786;3.53e-14;4!UBERON:0004808;3.53e-14;4!UBERON:0001277;3.53e-14;4!UBERON:0000485;2.68e-08;7!UBERON:0003929;2.68e-08;7!UBERON:0001764;1.45e-07;1!UBERON:0001825;1.45e-07;1!UBERON:0003350;2.60e-07;8!UBERON:0001052;6.89e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0001242,2.65e-14,4;UBERON:0001262,2.65e-14,4;UBERON:0004786,2.65e-14,4;UBERON:0004808,2.65e-14,4;UBERON:0001277,2.65e-14,4;UBERON:0001764,1.46e-07,1;UBERON:0001825,1.46e-07,1;UBERON:0003350,2.27e-07,8;UBERON:0001052,5.79e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.65746817298322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95523743325651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642352300414798,0.605399121573143,0,0,0.921722292925374,1.3420566473545,1.33479313369527,0,0.278406173895242,0,0,0.66614393599564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0.520855522170466,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.153900517007594,0,0.922255617552241,2.06442582142476,3.15077378573823,0.31900115973192,0.0915975934018623,0,0,0,0.498635045700469,1.1279783030859,1.17637520590644,1.00692952185506,2.46679852541441,0,1.26598838716816,1.95879369790977,3.67517985728246,3.89499551535764,0,0,0,0.296521128680622,0,0,0,0,0,0,0.978323094660449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.783939179315021,0,0,0,0,0,0,0,2.38291542067051,0,1.64450309576101,1.19228767021794,0,0,3.36667045056442,0,1.19885765749278,0,3.43609788497747,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0.688992370603241,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39557285273876,0,1.13312091520126,0,0,0,0,0,3.52407511158336,0,0,0,0,0.988058159489721,0,0,0,0,0,0,9.58029987126429,0,0,0,0,0,0.0620964029413835,0,0,0.151649117541648,0.856396000634902,0,0,3.18826262943815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655219697692825,0.983091635014877,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=26bp_to_ENST00000442996,uc002uiw.2_5end | |||
|coexpression_cluster_id=C4146 | |||
|description=CAGE_peak_2_at_ENST00000442996_5end,CAGE_peak_2_at_uc002uiw.2_5end | |||
|id=chr2:175411895..175411908,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002563;3.53e-14;4!CL:0002253;5.95e-13;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.65e-14,4;CL:0002253,4.17e-13,2 | |||
|ontology_enrichment_development_v019=UBERON:0003124;3.82e-07;1 | |||
|ontology_enrichment_disease=DOID:14566!1.31e-26!239;DOID:162!3.17e-25!235;DOID:0050687!1.46e-22!143;DOID:305!3.83e-14!106;DOID:0050686!7.93e-13!137;DOID:8692!5.79e-10!31;DOID:299!1.49e-09!25;DOID:3095!3.06e-08!22;DOID:2994!3.06e-08!22;DOID:1036!1.28e-07!8;DOID:1240!2.68e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:1036;2.33e-17;8!DOID:4468;4.29e-12;2!DOID:3119;2.16e-10;14!DOID:299;2.29e-10;25!DOID:8692;4.52e-08;31!DOID:0050619;1.45e-07;1!DOID:1357;1.45e-07;1!DOID:1799;1.91e-07;1!DOID:10165;1.91e-07;1!DOID:1798;1.91e-07;1!DOID:3371;3.82e-07;1!DOID:4549;3.82e-07;1!DOID:5861;3.82e-07;1!DOID:6496;3.82e-07;1!DOID:5409;5.38e-07;4!DOID:0060085;7.08e-07;1!DOID:3165;7.08e-07;1!DOID:0060121;7.08e-07;1!DOID:2438;7.08e-07;1!DOID:4418;7.08e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.38e-17,235;DOID:1036,3.54e-17,8;DOID:14566,4.26e-17,239;DOID:0050686,1.57e-15,137;DOID:0050687,2.19e-13,143;DOID:4468,2.72e-12,2;DOID:305,1.13e-10,106;DOID:299,1.68e-10,25;DOID:3119,1.94e-10,14;DOID:8692,6.04e-08,31;DOID:0050619,1.46e-07,1;DOID:1357,1.46e-07,1;DOID:1799,1.98e-07,1;DOID:10165,1.98e-07,1;DOID:1798,1.98e-07,1;DOID:3371,3.82e-07,1;DOID:4549,3.82e-07,1;DOID:5861,3.82e-07,1;DOID:6496,3.82e-07,1;DOID:5409,5.96e-07,4;DOID:0060085,7.73e-07,1;DOID:3165,7.73e-07,1;DOID:0060121,7.73e-07,1;DOID:2438,7.73e-07,1;DOID:4418,7.73e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001242;3.53e-14;4!UBERON:0001262;3.53e-14;4!UBERON:0004786;3.53e-14;4!UBERON:0004808;3.53e-14;4!UBERON:0001277;3.53e-14;4!UBERON:0000485;2.68e-08;7!UBERON:0003929;2.68e-08;7!UBERON:0001764;1.45e-07;1!UBERON:0001825;1.45e-07;1!UBERON:0003350;2.60e-07;8!UBERON:0001052;6.89e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,2.65e-14,4;UBERON:0001262,2.65e-14,4;UBERON:0004786,2.65e-14,4;UBERON:0004808,2.65e-14,4;UBERON:0001277,2.65e-14,4;UBERON:0001764,1.46e-07,1;UBERON:0001825,1.46e-07,1;UBERON:0003350,2.27e-07,8;UBERON:0001052,5.79e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.65746817298322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95523743325651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642352300414798,0.605399121573143,0,0,0.921722292925374,1.3420566473545,1.33479313369527,0,0.278406173895242,0,0,0.66614393599564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0.520855522170466,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.153900517007594,0,0.922255617552241,2.06442582142476,3.15077378573823,0.31900115973192,0.0915975934018623,0,0,0,0.498635045700469,1.1279783030859,1.17637520590644,1.00692952185506,2.46679852541441,0,1.26598838716816,1.95879369790977,3.67517985728246,3.89499551535764,0,0,0,0.296521128680622,0,0,0,0,0,0,0.978323094660449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.783939179315021,0,0,0,0,0,0,0,2.38291542067051,0,1.64450309576101,1.19228767021794,0,0,3.36667045056442,0,1.19885765749278,0,3.43609788497747,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0.688992370603241,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39557285273876,0,1.13312091520126,0,0,0,0,0,3.52407511158336,0,0,0,0,0.988058159489721,0,0,0,0,0,0,9.58029987126429,0,0,0,0,0,0.0620964029413835,0,0,0.151649117541648,0.856396000634902,0,0,3.18826262943815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655219697692825,0.983091635014877,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40341013740704,0,4.45241380618418,0.49131575253029,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,2.48366636455389,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0.316027223465453,0.813689977576877,0,0,0,0,0,0,0.591660003652827,0.852134047591577,0,1.60374807980835,0,0,0,0,0.243835849964539,0,0,1.1598144313382,0,0,0,0.83244063544298,8.35801007088304,0,3.01925687133347,0,0,5.17349025997675,0,0.471353094203252,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0.126166424835079,0.109265571963696,2.28057301820587,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0,1.49418284228802,0,0,0,0,0,0,0,0 | |||
|short_description=p2@ENST00000442996,p2@uc002uiw.2 | |||
}} |
Revision as of 14:46, 12 September 2013
Short description: | p2@ENST00000442996, p2@uc002uiw.2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENST00000442996_5end, CAGE_peak_2_at_uc002uiw.2_5end |
Coexpression cluster: | C4146_maxillary_small_smallcell_lung_Prostate_gastric_pancreatic |
Association with transcript: | 26bp_to_ENST00000442996, uc002uiw.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.65e-14 | 4 |
epithelial cell of large intestine | 4.17e-13 | 2 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 2.65e-14 | 4 |
wall of intestine | 2.65e-14 | 4 |
gastrointestinal system mucosa | 2.65e-14 | 4 |
gastrointestinal system epithelium | 2.65e-14 | 4 |
intestinal epithelium | 2.65e-14 | 4 |
maxillary sinus | 1.46e-07 | 1 |
paranasal sinus | 1.46e-07 | 1 |
epithelium of mucosa | 2.27e-07 | 8 |
rectum | 5.79e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.38e-17 | 235 |
chronic leukemia | 3.54e-17 | 8 |
disease of cellular proliferation | 4.26e-17 | 239 |
organ system cancer | 1.57e-15 | 137 |
cell type cancer | 2.19e-13 | 143 |
clear cell adenocarcinoma | 2.72e-12 | 2 |
carcinoma | 1.13e-10 | 106 |
adenocarcinoma | 1.68e-10 | 25 |
gastrointestinal system cancer | 1.94e-10 | 14 |
myeloid leukemia | 6.04e-08 | 31 |
paranasal sinus cancer | 1.46e-07 | 1 |
maxillary sinus cancer | 1.46e-07 | 1 |
islet cell tumor | 1.98e-07 | 1 |
endocrine pancreas cancer | 1.98e-07 | 1 |
pancreatic endocrine carcinoma | 1.98e-07 | 1 |
chondrosarcoma | 3.82e-07 | 1 |
extraosseous chondrosarcoma | 3.82e-07 | 1 |
myxoid chondrosarcoma | 3.82e-07 | 1 |
extraskeletal myxoid chondrosarcoma | 3.82e-07 | 1 |
lung small cell carcinoma | 5.96e-07 | 4 |
organ system benign neoplasm | 7.73e-07 | 1 |
skin benign neoplasm | 7.73e-07 | 1 |
integumentary system benign neoplasm | 7.73e-07 | 1 |
dermis tumor | 7.73e-07 | 1 |
cutaneous fibrous histiocytoma | 7.73e-07 | 1 |
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