FFCP PHASE1:Mm9::chr10:12589428..12589439,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=22288|HGNC=|UniProt=E9Q916|association_with_transcript=-265bp_to_ENSMUST00000171669,uc007eke.1_5end|description=CAGE_peak_13_at_Utrn_5end|id=chr10:12589428..12589439,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000349,9.88e-08,3;CL:0000351,9.88e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000358,9.88e-08,3;UBERON:0000307,9.88e-08,3;UBERON:0007010,9.88e-08,3|phase1_expression=0.320297694209588,0.348975407639361,0,0.90739263392049,0.500895729946347,1.34303417529512,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,0.340173160604279,0.297872853602656,0.522399578277871,0.159992422793407,0.45881856213434,1.14846392823004,0,0.215471232685889,0.190023419456374,1.00812051903972,0.221730510655305,0,0,0,2.3108129580102,0.664938581433969,1.02084678131185,0.418531630736908,0,0,0.588231488031014,0.683045484958446,0.485510353031154,1.00717454380462,0.101376931219515,0.367093504323363,0,0,0,0,0.279972843250725,0,0,1.45072428402269,0,0.257259436035947,0.286533439938757,0,0,0,1.26766280701236,0,0.889294796111139,0,0,0,0,0,0.207379224616955,0.270011876663381,0,0,0.441737081903227,0,0.383381884072945,0,0,0,0,0.263772575460388,0.0914876436024097,0,0.279182999001381,0,0,0.294628585473668,0.284743361598206,0,0.530083353332288,1.13357340160178,0.579728977403356,0,2.719885334831,0,1.29955283489534,0,0,0,0,0,0.704217098883403,0,0,0,0.432982082022428,0.760079596425296,1.01104889002957,0.34255163915718,0,0.742210695324124,0.520455980298408,2.43572382649713,0.461230994512117,1.05505848386836,1.41106448562846,0.628332956648377,2.47194967734374,1.01219549843938,0.884610551949874,0.485300549842228,0.441683036920787,1.45462575940567,0,0,0.209446706813455,1.53274233125155,0.239630249011841,0,1.39777249780371,0.149790639404823,0.457500602818626,0,0.173824320192276,0.511430914660661,0,0,0.509196819251581,0.497627882440372,0,0.210441855886474,1.95180664444056,0.229902104433473,0.180062129805349,0.30140963567143,0.544291993210623,0.2562274405697,0.187403449119458,0.517406741478031,0.431135985865684,1.51284864134255,0.879755620819744,0.43839146485515,0.556094498451196,0.348252166522167,0.411564272815887,0.59710280045548,0,0,0,0.414251545071004,1.40715635988658,0.540186184383045,0.23674473558521,0.393528463494808,0.308534225774757,0.465067889500816,0,0.233530684734339,0.16455984991348,0.32833492815819,0.0810688095458557,0.438599962275997,0,0,0.210289948564127,0.205809224758569,1.65209391491899,0.264450566663544,1.2797295032114,0.696710015581316,0.257734922644187,0.403367049246685,0,0.190225626112559,0,0,0.502670417600539,0.397912944082302,0.38992817423824,1.79763881730844,0.864552199498777,0.597423819763102,0.569003702859245,1.14248512609729,1.1270773567308,1.01825663922657,0.193952487167626,0.841629838683823,0.758838445491087,0.590440591918409,0,0.246794327843601,0,0,0.589676985339609,0.224862112384854,0.405720242777006,0,0.25462585178142,0.287696137450811,0.324270453550071,0,0,0,0.312037673114561,0.252578877947112,0,0,0.739012760666419,0.757965647081939,0.651859905768103,1.01847051465113,0.234690248288502,1.00503754465089,1.19021820443007,1.17080188714679,1.26108115284953,0.44292937929755,0.637819074629948,0.81931657357869,0.690739927463582,0.723245292907558,0,0,0.491764273019036,0.275936746304732,0.321101179975584,0.117211686592203,0,0,0,0,0,0.238968797952552,0.445597348164788,0.283076530788832,0,0.584511715822624,0,0.963963949265421,0.851640511249612,0.178065603667255,0.651547837414304,0.494910368917606,0,0.728341908464944,0,0.943025398779491,0.295301892880773,0.614870295887855,0.516856586336442,1.09060118843252,0.712994756769443,0,0,0,0.340439605753788,0.36012218806262,0.776152102696527,0.214337035031592,0.532020700926821,0.178368817602071,0.164549020602121,0,1.40803024838226,1.0591603543191,0,0.8244312647074,0.645857706783622,0.663442174209714,0.358117032009409,0.820704498725306,0,0.18542530201051,0.512612642393558,0.206386867963223,0.740778109478847,0.376736914009382,0.136694227721025,0.228778173206523,2.03974115992626,1.39951452323658,1.79659965945751,0,0.474503990371703,0.609958401380546,0.324016022465404,0.418176592028937,0.655087691238533,0.404593039154462,0.909188012978695,0.26175594198403,0.259229946583586,0.621339313086926,0,0.299033092087958,0.330916980914195,0.194451188344048,0.645799117388655,0,0.352071715937262,0.651021924219751,1.57289016638566,0.724752362478018,0.288030006257865,0,0,0.205421914329655,0.649604114888975,0.358053391334963,0.198681354781265,0.120195449519969,0.147689527174577,0.403865799792591,0.0762068066549998,0,0.0974578807397524,0,0.350630706544707,0.680191150845634,2.44184548711471,3.3194126945506,3.02192309455341,0.772758376128762,1.50145980360946,0.36630324853453,0.428736758158132,0.501572104035363,0.564751842617067,0.460325236507177,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0.31136204275253,0.798049746802062,0.512200817262403,0.486213434136588,0.628839487883947,0.551530525350042,0.222246727801615,0.824140228955577,0.320919209591815,0.505394423527595,0.50695859978048,0.377252682772152,0.561849044819294,0.704276676453562,0.631790158511746,1.42888107384922,0.579421629724277,0.192909220463705,1.23625770240992,0.735994600671987,0,0.532427418478012,0.238436189947321,0.726732083161643,1.12931256498397,0.169229215783353,0.914639864363863,0.526139422875686,0.950628796921032,0.561142271657738,0.474540072496697,0.197008964751127,0,0.154936841185966,0.578719832943424,0,0.467863216890817,0.644613162144895,0.57386499620653,0.220591419119515,0.695603506861264|short_description=p13@Utrn}} | ||
|EntrezGene=22288 | |||
|HGNC= | |||
|UniProt=E9Q916 | |||
|association_with_transcript=-265bp_to_ENSMUST00000171669,uc007eke.1_5end | |||
|description=CAGE_peak_13_at_Utrn_5end | |||
|id=chr10:12589428..12589439,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,9.88e-08,3;CL:0000351,9.88e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,9.88e-08,3;UBERON:0000307,9.88e-08,3;UBERON:0007010,9.88e-08,3 | |||
|phase1_expression=0.320297694209588,0.348975407639361,0,0.90739263392049,0.500895729946347,1.34303417529512,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,0.340173160604279,0.297872853602656,0.522399578277871,0.159992422793407,0.45881856213434,1.14846392823004,0,0.215471232685889,0.190023419456374,1.00812051903972,0.221730510655305,0,0,0,2.3108129580102,0.664938581433969,1.02084678131185,0.418531630736908,0,0,0.588231488031014,0.683045484958446,0.485510353031154,1.00717454380462,0.101376931219515,0.367093504323363,0,0,0,0,0.279972843250725,0,0,1.45072428402269,0,0.257259436035947,0.286533439938757,0,0,0,1.26766280701236,0,0.889294796111139,0,0,0,0,0,0.207379224616955,0.270011876663381,0,0,0.441737081903227,0,0.383381884072945,0,0,0,0,0.263772575460388,0.0914876436024097,0,0.279182999001381,0,0,0.294628585473668,0.284743361598206,0,0.530083353332288,1.13357340160178,0.579728977403356,0,2.719885334831,0,1.29955283489534,0,0,0,0,0,0.704217098883403,0,0,0,0.432982082022428,0.760079596425296,1.01104889002957,0.34255163915718,0,0.742210695324124,0.520455980298408,2.43572382649713,0.461230994512117,1.05505848386836,1.41106448562846,0.628332956648377,2.47194967734374,1.01219549843938,0.884610551949874,0.485300549842228,0.441683036920787,1.45462575940567,0,0,0.209446706813455,1.53274233125155,0.239630249011841,0,1.39777249780371,0.149790639404823,0.457500602818626,0,0.173824320192276,0.511430914660661,0,0,0.509196819251581,0.497627882440372,0,0.210441855886474,1.95180664444056,0.229902104433473,0.180062129805349,0.30140963567143,0.544291993210623,0.2562274405697,0.187403449119458,0.517406741478031,0.431135985865684,1.51284864134255,0.879755620819744,0.43839146485515,0.556094498451196,0.348252166522167,0.411564272815887,0.59710280045548,0,0,0,0.414251545071004,1.40715635988658,0.540186184383045,0.23674473558521,0.393528463494808,0.308534225774757,0.465067889500816,0,0.233530684734339,0.16455984991348,0.32833492815819,0.0810688095458557,0.438599962275997,0,0,0.210289948564127,0.205809224758569,1.65209391491899,0.264450566663544,1.2797295032114,0.696710015581316,0.257734922644187,0.403367049246685,0,0.190225626112559,0,0,0.502670417600539,0.397912944082302,0.38992817423824,1.79763881730844,0.864552199498777,0.597423819763102,0.569003702859245,1.14248512609729,1.1270773567308,1.01825663922657,0.193952487167626,0.841629838683823,0.758838445491087,0.590440591918409,0,0.246794327843601,0,0,0.589676985339609,0.224862112384854,0.405720242777006,0,0.25462585178142,0.287696137450811,0.324270453550071,0,0,0,0.312037673114561,0.252578877947112,0,0,0.739012760666419,0.757965647081939,0.651859905768103,1.01847051465113,0.234690248288502,1.00503754465089,1.19021820443007,1.17080188714679,1.26108115284953,0.44292937929755,0.637819074629948,0.81931657357869,0.690739927463582,0.723245292907558,0,0,0.491764273019036,0.275936746304732,0.321101179975584,0.117211686592203,0,0,0,0,0,0.238968797952552,0.445597348164788,0.283076530788832,0,0.584511715822624,0,0.963963949265421,0.851640511249612,0.178065603667255,0.651547837414304,0.494910368917606,0,0.728341908464944,0,0.943025398779491,0.295301892880773,0.614870295887855,0.516856586336442,1.09060118843252,0.712994756769443,0,0,0,0.340439605753788,0.36012218806262,0.776152102696527,0.214337035031592,0.532020700926821,0.178368817602071,0.164549020602121,0,1.40803024838226,1.0591603543191,0,0.8244312647074,0.645857706783622,0.663442174209714,0.358117032009409,0.820704498725306,0,0.18542530201051,0.512612642393558,0.206386867963223,0.740778109478847,0.376736914009382,0.136694227721025,0.228778173206523,2.03974115992626,1.39951452323658,1.79659965945751,0,0.474503990371703,0.609958401380546,0.324016022465404,0.418176592028937,0.655087691238533,0.404593039154462,0.909188012978695,0.26175594198403,0.259229946583586,0.621339313086926,0,0.299033092087958,0.330916980914195,0.194451188344048,0.645799117388655,0,0.352071715937262,0.651021924219751,1.57289016638566,0.724752362478018,0.288030006257865,0,0,0.205421914329655,0.649604114888975,0.358053391334963,0.198681354781265,0.120195449519969,0.147689527174577,0.403865799792591,0.0762068066549998,0,0.0974578807397524,0,0.350630706544707,0.680191150845634,2.44184548711471,3.3194126945506,3.02192309455341,0.772758376128762,1.50145980360946,0.36630324853453,0.428736758158132,0.501572104035363,0.564751842617067,0.460325236507177,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0.31136204275253,0.798049746802062,0.512200817262403,0.486213434136588,0.628839487883947,0.551530525350042,0.222246727801615,0.824140228955577,0.320919209591815,0.505394423527595,0.50695859978048,0.377252682772152,0.561849044819294,0.704276676453562,0.631790158511746,1.42888107384922,0.579421629724277,0.192909220463705,1.23625770240992,0.735994600671987,0,0.532427418478012,0.238436189947321,0.726732083161643,1.12931256498397,0.169229215783353,0.914639864363863,0.526139422875686,0.950628796921032,0.561142271657738,0.474540072496697,0.197008964751127,0,0.154936841185966,0.578719832943424,0,0.467863216890817,0.644613162144895,0.57386499620653,0.220591419119515,0.695603506861264 | |||
|short_description=p13@Utrn | |||
}} |
Revision as of 15:57, 12 September 2013
Short description: | p13@Utrn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_Utrn_5end |
Coexpression cluster: | NA |
Association with transcript: | -265bp_to_ENSMUST00000171669, uc007eke.1_5end |
EntrezGene: | Utrn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 9.88e-08 | 3 |
trophoblast cell | 9.88e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 9.88e-08 | 3 |
blastula | 9.88e-08 | 3 |
cleaving embryo | 9.88e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.