FFCP PHASE1:Mm9::chr10:20444634..20444655,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=29863|HGNC=|MCL_coexpression_id=1504|UniProt=E9PZN2|association_with_transcript=-132bp_to_ENSMUST00000170265_5end|description=CAGE_peak_2_at_Pde7b_5end|id=chr10:20444634..20444655,-|ontology_enrichment_celltype=CL:0000107!3.18e-07!9|ontology_enrichment_celltype_v019_2=CL:0000107,9.52e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004111!4.30e-10!122;UBERON:0004121!4.44e-10!102;UBERON:0000924!4.44e-10!102;UBERON:0006601!4.44e-10!102;UBERON:0002346!4.29e-09!71;UBERON:0003075!4.29e-09!71;UBERON:0007284!4.29e-09!71;UBERON:0000033!7.31e-09!63;UBERON:0000025!7.48e-09!114;UBERON:0001017!8.95e-09!73;UBERON:0005743!8.95e-09!73;UBERON:0000468!9.27e-09!333;UBERON:0000073!1.64e-08!75;UBERON:0001016!1.64e-08!75;UBERON:0003056!4.34e-08!49;UBERON:0002410!3.18e-07!9;UBERON:0002021!4.67e-07!10;UBERON:0000411!4.67e-07!10;UBERON:0001950!4.67e-07!10;UBERON:0001049!5.24e-07!52;UBERON:0005068!5.24e-07!52;UBERON:0006241!5.24e-07!52;UBERON:0007135!5.24e-07!52|ontology_enrichment_uberon_v019_2=UBERON:0010314,3.97e-11,92;UBERON:0004121,3.58e-10,95;UBERON:0000924,3.58e-10,95;UBERON:0006601,3.58e-10,95;UBERON:0010371,1.32e-09,73;UBERON:0002346,2.13e-09,64;UBERON:0003075,2.13e-09,64;UBERON:0007284,2.13e-09,64;UBERON:0004111,1.86e-08,122;UBERON:0001017,2.23e-08,73;UBERON:0001016,6.52e-08,75;UBERON:0002410,9.52e-08,9;UBERON:0002021,1.45e-07,10;UBERON:0000411,1.45e-07,10;UBERON:0001950,1.45e-07,10;UBERON:0000025,1.97e-07,114;UBERON:0003056,2.31e-07,49|phase1_expression=1.44133962394315,0,0,0,0,0,0,0.387369970324729,0.281577444303333,0.468129052643987,0,0.159544317990673,0,0,0,0.404950534779652,2.09868563438444,0,0.685572168028694,0.42438965179803,3.23164502574065,0.198581902401771,0,0,0.22940928106717,0,0,0,0,0.252030129759931,0,0,0,0,0.288851619751275,0,0,0,0.7813353445238,0.523523743973798,1.17646297606203,0.683045484958446,0.485510353031154,5.16176953699867,3.95370031756107,7.52541683862894,0.782391344348039,0.218025156380447,0.219686182734472,0.194429899074283,0.139986421625363,0,0,0,0,0.257259436035947,0.286533439938757,1.54701627683233,0.809265843438391,0.528990979272033,0,0,0,4.04954872776629,3.9554654502679,3.5524005747305,1.19840044207362,0.384218305321555,0,0.675029691658453,0.420649922702764,2.57085885963423,1.98781686856452,0.61245399607477,0.383381884072945,0.919218786610021,0,2.93680877595932,2.30409799884365,0.923204014111357,0.274462930807229,1.56274011167028,1.67509799400829,4.50210088025344,2.44477196442896,5.30331453852602,3.84403538157578,0.372798891650601,1.13589289999776,0.831287161174641,1.44932244350839,2.58127163094416,0.679971333707751,0.539703191637817,0.649776417447669,0,1.40444420131752,0,0.259786004602869,0,4.3661460130771,0,0,0,0,0,0,1.37020655662872,1.55362730188303,0.742210695324124,2.4287945747259,1.82679286987285,0.230615497256059,1.3565037649736,0.705532242814229,0.502666365318702,0,3.18118585223806,1.76922110389975,5.17653919831709,5.74187947997023,3.39412677194655,0,1.17112318804619,2.51336048176146,0.766371165625774,0.479260498023681,0,0.635351135365324,5.99162557619291,16.4700217014706,2.01046963380583,7.99591872884472,6.64860189058859,5.40248915854856,7.78758062725237,1.42575109390443,3.73220911830279,2.0217820674694,13.0473950649614,3.3831315170303,0.919608417733892,1.98068342785884,5.72678307775717,1.97305847538851,2.8185018462667,2.06143794031403,8.2785078636485,0.215567992932842,0.756424320671277,2.28736461413134,1.7535658594206,8.61946472599353,2.43776516565517,6.79081050146213,1.79130840136644,0,0,1.13665399758237,2.48550927042602,7.97388603935727,5.58192390529146,2.3674473558521,3.73852040320067,4.16521204795921,2.55787339225449,2.41446061259657,0.934122738937356,1.31647879930784,4.59668899421467,3.89130285820108,5.4093995347373,3.73235195994786,2.54992195644706,5.88811855979556,0.720332286654991,0,0,1.49301775374664,2.32236671860439,1.03093969057675,1.00841762311671,1.77902435075896,1.52180500890047,0.474529061544512,0.988193728344065,2.01068167040216,1.79060824837036,2.53453313254856,0.898819408654221,0.648414149624083,0.796565093017469,0.189667900953082,2.17072173958485,1.1270773567308,1.62921062276251,3.10323979468201,1.1221731182451,2.59269802209455,2.06654207171443,3.29697328466887,3.57851775373222,1.1858105083486,0.667380422864376,0.196558995113203,0,0,0,0,0.863088412352432,0.486405680325106,0.274561413188081,2.87536413054709,2.23284568601102,3.12037673114561,1.01031551178845,0.538192240565737,2.41221760681684,3.14080423283228,0.568474235311454,0.488894929326078,1.69745085775188,2.58159273117352,0.837531287209079,2.85652369063216,0.975668239288994,1.89162172927429,4.65075848262427,2.07291199254733,6.39066927391378,3.9717545829156,4.19482269886384,1.50791283939272,3.80733978673097,3.44234991113325,1.37968373152366,3.69266356971921,2.57865710502847,0,10.6037789425837,12.6203287766503,16.0079885161622,14.8642144435631,11.9484398976276,13.3679204449436,6.51076020814315,13.3587531552715,13.4437694639203,13.0444966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| ||
|EntrezGene=29863 | |||
|HGNC= | |||
|MCL_coexpression_id=1504 | |||
|UniProt=E9PZN2 | |||
|association_with_transcript=-132bp_to_ENSMUST00000170265_5end | |||
|description=CAGE_peak_2_at_Pde7b_5end | |||
|id=chr10:20444634..20444655,- | |||
|ontology_enrichment_celltype=CL:0000107!3.18e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,9.52e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!4.30e-10!122;UBERON:0004121!4.44e-10!102;UBERON:0000924!4.44e-10!102;UBERON:0006601!4.44e-10!102;UBERON:0002346!4.29e-09!71;UBERON:0003075!4.29e-09!71;UBERON:0007284!4.29e-09!71;UBERON:0000033!7.31e-09!63;UBERON:0000025!7.48e-09!114;UBERON:0001017!8.95e-09!73;UBERON:0005743!8.95e-09!73;UBERON:0000468!9.27e-09!333;UBERON:0000073!1.64e-08!75;UBERON:0001016!1.64e-08!75;UBERON:0003056!4.34e-08!49;UBERON:0002410!3.18e-07!9;UBERON:0002021!4.67e-07!10;UBERON:0000411!4.67e-07!10;UBERON:0001950!4.67e-07!10;UBERON:0001049!5.24e-07!52;UBERON:0005068!5.24e-07!52;UBERON:0006241!5.24e-07!52;UBERON:0007135!5.24e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,3.97e-11,92;UBERON:0004121,3.58e-10,95;UBERON:0000924,3.58e-10,95;UBERON:0006601,3.58e-10,95;UBERON:0010371,1.32e-09,73;UBERON:0002346,2.13e-09,64;UBERON:0003075,2.13e-09,64;UBERON:0007284,2.13e-09,64;UBERON:0004111,1.86e-08,122;UBERON:0001017,2.23e-08,73;UBERON:0001016,6.52e-08,75;UBERON:0002410,9.52e-08,9;UBERON:0002021,1.45e-07,10;UBERON:0000411,1.45e-07,10;UBERON:0001950,1.45e-07,10;UBERON:0000025,1.97e-07,114;UBERON:0003056,2.31e-07,49 | |||
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0.387369970324729,0.281577444303333,0.468129052643987,0,0.159544317990673,0,0,0,0.404950534779652,2.09868563438444,0,0.685572168028694,0.42438965179803,3.23164502574065,0.198581902401771,0,0,0.22940928106717,0,0,0,0,0.252030129759931,0,0,0,0,0.288851619751275,0,0,0,0.7813353445238,0.523523743973798,1.17646297606203,0.683045484958446,0.485510353031154,5.16176953699867,3.95370031756107,7.52541683862894,0.782391344348039,0.218025156380447,0.219686182734472,0.194429899074283,0.139986421625363,0,0,0,0,0.257259436035947,0.286533439938757,1.54701627683233,0.809265843438391,0.528990979272033,0,0,0,4.04954872776629,3.9554654502679,3.5524005747305,1.19840044207362,0.384218305321555,0,0.675029691658453,0.420649922702764,2.57085885963423,1.98781686856452,0.61245399607477,0.383381884072945,0.919218786610021,0,2.93680877595932,2.30409799884365,0.923204014111357,0.274462930807229,1.56274011167028,1.67509799400829,4.50210088025344,2.44477196442896,5.30331453852602,3.84403538157578,0.372798891650601,1.13589289999776,0.831287161174641,1.44932244350839,2.58127163094416,0.679971333707751,0.539703191637817,0.649776417447669,0,1.40444420131752,0,0.259786004602869,0,4.3661460130771,0,0,0,0,0,0,1.37020655662872,1.55362730188303,0.742210695324124,2.4287945747259,1.82679286987285,0.230615497256059,1.3565037649736,0.705532242814229,0.502666365318702,0,3.18118585223806,1.76922110389975,5.17653919831709,5.74187947997023,3.39412677194655,0,1.17112318804619,2.51336048176146,0.766371165625774,0.479260498023681,0,0.635351135365324,5.99162557619291,16.4700217014706,2.01046963380583,7.99591872884472,6.64860189058859,5.40248915854856,7.78758062725237,1.42575109390443,3.73220911830279,2.0217820674694,13.0473950649614,3.3831315170303,0.919608417733892,1.98068342785884,5.72678307775717,1.97305847538851,2.8185018462667,2.06143794031403,8.2785078636485,0.215567992932842,0.756424320671277,2.28736461413134,1.7535658594206,8.61946472599353,2.43776516565517,6.79081050146213,1.79130840136644,0,0,1.13665399758237,2.48550927042602,7.97388603935727,5.58192390529146,2.3674473558521,3.73852040320067,4.16521204795921,2.55787339225449,2.41446061259657,0.934122738937356,1.31647879930784,4.59668899421467,3.89130285820108,5.4093995347373,3.73235195994786,2.54992195644706,5.88811855979556,0.720332286654991,0,0,1.49301775374664,2.32236671860439,1.03093969057675,1.00841762311671,1.77902435075896,1.52180500890047,0.474529061544512,0.988193728344065,2.01068167040216,1.79060824837036,2.53453313254856,0.898819408654221,0.648414149624083,0.796565093017469,0.189667900953082,2.17072173958485,1.1270773567308,1.62921062276251,3.10323979468201,1.1221731182451,2.59269802209455,2.06654207171443,3.29697328466887,3.57851775373222,1.1858105083486,0.667380422864376,0.196558995113203,0,0,0,0,0.863088412352432,0.486405680325106,0.274561413188081,2.87536413054709,2.23284568601102,3.12037673114561,1.01031551178845,0.538192240565737,2.41221760681684,3.14080423283228,0.568474235311454,0.488894929326078,1.69745085775188,2.58159273117352,0.837531287209079,2.85652369063216,0.975668239288994,1.89162172927429,4.65075848262427,2.07291199254733,6.39066927391378,3.9717545829156,4.19482269886384,1.50791283939272,3.80733978673097,3.44234991113325,1.37968373152366,3.69266356971921,2.57865710502847,0,10.6037789425837,12.6203287766503,16.0079885161622,14.8642144435631,11.9484398976276,13.3679204449436,6.51076020814315,13.3587531552715,13.4437694639203,13.0444966722353,5.14114106274891,4.25820255624806,2.13678724400706,0.325773918707152,4.28922319728592,0,0.242780636154981,0,0.943025398779491,0,1.22974059177571,1.29214146584111,0,1.06949213515416,0.316036757935816,1.05418608574999,1.03135543248187,9.19186935535228,3.6012218806262,2.45781499187234,1.92903331528433,2.48276327099183,4.63758925765383,5.10101963866575,3.95804433848979,0,0,0.882113592219848,1.6488625294148,2.26050197374268,1.08563264870681,2.38744688006273,0.820704498725306,1.1659233465194,3.8939313422207,0.341741761595705,1.03193433981611,2.03713980106683,0.376736914009382,0.27338845544205,0.457556346413045,0.169978429993855,0,0,1.90934123603023,0.474503990371703,0.609958401380546,1.72808545314882,1.88179466413022,2.62035076495413,2.42755823492677,1.48776220305605,3.66458318777641,2.46268449254406,2.4853572523477,0.56369293868419,0.448549638131936,0.496375471371293,0.583353565032143,0.904118764344118,1.01373675294467,0.469428954583016,0.651021924219751,0.419437377702843,0.966336483304024,0.288030006257865,0.316011120628178,0.405450430580328,0.410843828659309,0.51968329191118,0.179026695667481,0,0.240390899039938,0.295379054349154,0.302899349844443,0,0,0,0.192423683280659,0,7.48210265930198,0,0,0.167884616364078,2.70465431645067,4.50437941082837,5.31139710375069,2.57242054894879,2.00628841614145,3.3885110557024,7.82552902062201,7.44764167471216,6.01486138202907,15.0718154349541,6.0431511791176,9.45031500324528,17.1122057225204,11.3285602246051,16.0505696643064,0.415149390336707,0,2.0488032690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| |||
|short_description=p2@Pde7b | |||
}} |
Revision as of 16:23, 12 September 2013
Short description: | p2@Pde7b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Pde7b_5end |
Coexpression cluster: | MCL_coexpression_mm9:1504 |
Association with transcript: | -132bp_to_ENSMUST00000170265_5end |
EntrezGene: | Pde7b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 9.52e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 3.97e-11 | 92 |
ectoderm-derived structure | 3.58e-10 | 95 |
ectoderm | 3.58e-10 | 95 |
presumptive ectoderm | 3.58e-10 | 95 |
ecto-epithelium | 1.32e-09 | 73 |
neurectoderm | 2.13e-09 | 64 |
neural plate | 2.13e-09 | 64 |
presumptive neural plate | 2.13e-09 | 64 |
anatomical conduit | 1.86e-08 | 122 |
central nervous system | 2.23e-08 | 73 |
nervous system | 6.52e-08 | 75 |
autonomic nervous system | 9.52e-08 | 9 |
occipital lobe | 1.45e-07 | 10 |
visual cortex | 1.45e-07 | 10 |
neocortex | 1.45e-07 | 10 |
tube | 1.97e-07 | 114 |
pre-chordal neural plate | 2.31e-07 | 49 |
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