FFCP PHASE1:Hg19::chr2:242577050..242577074,+: Difference between revisions
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{{FFCP | 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6232795,0.548257766857182,1.98484471355718,7.56246350746369,1.02209942111676,0.535701835878287,0.672567444437648,0.606965604236632,1.36597314810779,2.48366636455389,3.91795557689649,2.22934412268644,1.83518279037446,1.44700101838268,0.945550727071746,1.00108261702862,1.41287567130925,6.12750800672407,0.280272163313789,2.73947616152849,1.07963795609311,1.43325506366115,1.57248397188644,2.21219056425817,1.3948971044175,2.78173235684127,2.40513409419076,0.62164849248911,1.0243108625637,0,0.860454717640555,0.828324005113957,0.426067023795788,0.423387050190929,0.68732060563215,5.27350855629344,6.68877257284203,1.78968690876468,1.17780280338292,1.21917924982269,1.29485767437579,0.205325613712494,2.3196288626764,3.39997695141398,2.10545517115895,0.994753875806841,3.68652281410463,1.92008339466232,5.82684738750774,0.754814217833368,2.31522474323834,1.5299169235277,4.23285566725371,1.71603825227734,1.17838273550813,1.57046773691956,1.48523200163543,2.113278637917,1.69927114687817,1.87967835959707,4.76988371004471,2.39858774219829,0.357107877211315,1.41157948686277,1.28386186702669,2.92134555298607,3.21110498383179,3.44014999563483,3.78651749263643,1.56380427439104,3.05445483238264,2.645134202577,1.48798007266701,1.84870251452567,0.432626562123789,0.883164973845552,1.09265571963696,1.0135880080915,0.61193297845189,1.06886962106224,1.19463369395298,1.75495277504663,3.10692662694782,8.57485216499771,2.48750831837634,3.30985586758065,1.49263787330687,1.90451545170992,13.8220267049053,23.0297190037633,0.672791175483681,1.01835453245064,2.82964064541507,0.653150243690884,0.684466602170562,6.73520530145875,1.43444410785353,1.33064142618405,1.30245229777559,1.06727345877715,3.8614456457388,0.898252021065869,0,1.833621662743,2.44137706989443,3.99454064511308,6.03821380773079,2.8851164307291|short_description=p2@ATG4B}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=23192 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20790 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000494465_5end | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_2_at_ATG4B_5end | |||
|id=chr2:242577050..242577074,+ | |||
|ontology_enrichment_celltype=CL:0000542!4.24e-16!53;CL:0000051!4.24e-16!53;CL:0000838!1.21e-15!52;CL:0000988!3.12e-15!182;CL:0000037!1.15e-14!172;CL:0000566!1.15e-14!172;CL:0002032!2.10e-12!165;CL:0000837!2.10e-12!165;CL:0000738!7.03e-12!140;CL:0000791!9.79e-12!18;CL:0000789!9.79e-12!18;CL:0002420!9.79e-12!18;CL:0002419!9.79e-12!18;CL:0000790!9.79e-12!18;CL:0000084!1.27e-11!25;CL:0000827!1.27e-11!25;CL:0002087!8.00e-10!119;CL:0002031!5.39e-09!124;CL:0000625!1.35e-07!11;CL:0000236!4.69e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.96e-12;18!CL:0000789;1.96e-12;18!CL:0002419;1.96e-12;18!CL:0000084;2.12e-12;25!CL:0000542;4.49e-11;53!CL:0000625;4.89e-08;11!CL:0000236;6.65e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.96e-17,177;CL:0000037,7.95e-17,168;CL:0000542,2.46e-16,53;CL:0000051,2.46e-16,53;CL:0000838,7.15e-16,52;CL:0002032,2.23e-14,161;CL:0000837,2.23e-14,161;CL:0000738,6.40e-14,136;CL:0000791,6.95e-12,18;CL:0000789,6.95e-12,18;CL:0002420,6.95e-12,18;CL:0002419,6.95e-12,18;CL:0000790,6.95e-12,18;CL:0000084,9.04e-12,25;CL:0000827,9.04e-12,25;CL:0002087,1.07e-11,115;CL:0002031,8.42e-11,120;CL:0000625,1.10e-07,11;CL:0000236,3.89e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000790;1.96e-12;18!CL:0000051;4.49e-11;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.17e-07!15;UBERON:0000179!1.17e-07!15;UBERON:0000463!1.17e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.79e-08;15!UBERON:0000179;5.79e-08;15!UBERON:0000463;5.79e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,9.49e-08,15;UBERON:0000179,9.49e-08,15;UBERON:0000463,9.49e-08,15 | |||
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| |||
|short_description=p2@ATG4B | |||
}} |
Revision as of 17:52, 12 September 2013
Short description: | p2@ATG4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ATG4B_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000494465_5end |
EntrezGene: | ATG4B |
HGNC: | 20790 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.96e-17 | 177 |
hematopoietic stem cell | 7.95e-17 | 168 |
lymphocyte | 2.46e-16 | 53 |
common lymphoid progenitor | 2.46e-16 | 53 |
lymphoid lineage restricted progenitor cell | 7.15e-16 | 52 |
hematopoietic oligopotent progenitor cell | 2.23e-14 | 161 |
hematopoietic multipotent progenitor cell | 2.23e-14 | 161 |
leukocyte | 6.40e-14 | 136 |
mature alpha-beta T cell | 6.95e-12 | 18 |
alpha-beta T cell | 6.95e-12 | 18 |
immature T cell | 6.95e-12 | 18 |
mature T cell | 6.95e-12 | 18 |
immature alpha-beta T cell | 6.95e-12 | 18 |
T cell | 9.04e-12 | 25 |
pro-T cell | 9.04e-12 | 25 |
nongranular leukocyte | 1.07e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 8.42e-11 | 120 |
CD8-positive, alpha-beta T cell | 1.10e-07 | 11 |
B cell | 3.89e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
blood | 9.49e-08 | 15 |
haemolymphatic fluid | 9.49e-08 | 15 |
organism substance | 9.49e-08 | 15 |
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