FFCP PHASE1:Mm9::chr10:94292256..94292277,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=36|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:94292256..94292277,-|id=chr10:94292256..94292277,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002031,4.43e-12,25;CL:0000838,9.56e-10,12;CL:0000791,1.98e-09,9;CL:0000789,1.98e-09,9;CL:0002420,1.98e-09,9;CL:0002419,1.98e-09,9;CL:0000790,1.98e-09,9;CL:0000988,4.78e-09,32;CL:0002032,4.78e-09,32;CL:0000037,4.78e-09,32;CL:0000837,4.78e-09,32;CL:0000542,5.98e-09,13;CL:0000051,5.98e-09,13;CL:0000738,7.80e-09,17;CL:0002087,7.80e-09,17;CL:0000084,1.16e-07,11;CL:0000827,1.16e-07,11;CL:0000624,3.70e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,2.52e-11,3;DOID:4045,2.52e-11,3|ontology_enrichment_uberon=UBERON:0001004!3.10e-10!42;UBERON:0000065!9.47e-10!41;UBERON:0004177!5.01e-09!29;UBERON:0003408!9.47e-08!24;UBERON:0002390!2.44e-07!45;UBERON:0003061!2.44e-07!45;UBERON:0002370!2.93e-07!23;UBERON:0000974!2.93e-07!23;UBERON:0004807!2.93e-07!23;UBERON:0005058!2.93e-07!23;UBERON:0003351!2.93e-07!23;UBERON:0009113!2.93e-07!23;UBERON:0003295!2.93e-07!23;UBERON:0009722!2.93e-07!23;UBERON:0005562!2.93e-07!23;UBERON:0007690!2.93e-07!23;UBERON:0002193!4.23e-07!48;UBERON:0003104!8.46e-07!131;UBERON:0009142!8.46e-07!131|ontology_enrichment_uberon_v019_2=UBERON:0002193,7.46e-15,48;UBERON:0002405,7.46e-15,48;UBERON:0002390,7.87e-14,45;UBERON:0003061,7.87e-14,45;UBERON:0002370,9.13e-13,23;UBERON:0000974,9.13e-13,23;UBERON:0004807,9.13e-13,23;UBERON:0005058,9.13e-13,23;UBERON:0003351,9.13e-13,23;UBERON:0009113,9.13e-13,23;UBERON:0003295,9.13e-13,23;UBERON:0009722,9.13e-13,23;UBERON:0005562,9.13e-13,23;UBERON:0007690,9.13e-13,23;UBERON:0006562,3.67e-12,24;UBERON:0003408,3.67e-12,24;UBERON:0001557,3.67e-12,24;UBERON:0001042,3.67e-12,24;UBERON:0008814,3.67e-12,24;UBERON:0009145,3.67e-12,24;UBERON:0004177,8.63e-12,29;UBERON:0005057,8.63e-12,29;UBERON:0000072,1.29e-10,27;UBERON:0000077,1.98e-09,35;UBERON:0007811,1.56e-07,36|phase1_expression=0,0,0,0,0,0,0,2.7115897922731,0.422366166455,0,0.34243593645101,0.239316476986009,5.9920255475922,2.71003247498892,0.999329285446988,0.607425802169478,0,3.3123527362615,5.75880621144103,5.51706547337439,0.17008658030214,0.595745707205312,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09265815368454,3.906676722619,5.23523743973798,1.76469446409304,1.36609096991689,0.971020706062307,0,0.202753862439029,0,0,0.436050312760893,0.219686182734472,0.388859798148567,0.419959264876088,0,1.67782606057736,1.45072428402269,1.68046899571232,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0.30559649555362,0.294628585473668,0.142371680799103,0,0,0.377857800533928,0,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0.216491041011214,0,0,0.34255163915718,5.43769555659061,0.445326417194474,0,0,0,0.150722640552623,0.705532242814229,0.628332956648377,0,0,0,0.161766849947409,0.441683036920787,0,1.86391761218122,0,0,0,0,0,0,0.299581278809645,0,0,0,0,0.20778804455956,0.162241263067758,0.305518091550949,0.248813941220186,0,0,0,0,0,0.30140963567143,0.136072998302656,0.12811372028485,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0.268273401399619,0,0,0,0.0810688095458557,0.146199987425332,0,0.134206418760372,0,0.308713837137853,0,0,0,0,0.38660238396628,0,0.22237804384487,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0.252946148497029,0,0.31399745568275,0.123397163921801,0,0,0.196558995113203,0.224862112384854,0.202860121388503,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0.923765950833023,0.189491411770485,0.651859905768103,0.169745085775188,0,0.167506257441816,0.476087281772027,0.195133647857799,0.630540576424764,0.664394068946325,0.478364305972461,0.491589944147214,0.518054945597687,0.867894351489069,0,1.08781136763742,0.983528546038072,0.275936746304732,0.160550589987792,0.117211686592203,0.163934945376675,0,0,0.390438744296638,0.215423397732799,0,0,0,0,0,0.395287777946524,0.642642632843614,0.141940085208269,0,0,0.494910368917606,1.32745138339963,0.242780636154981,0,0,0,0,0,0,0.356497378384721,0.632073515871632,0,0,0.340439605753788,0,0.129358683782755,0.214337035031592,0.532020700926821,0.356737635204141,0.329098041204242,0,0,0,0,0,0,0.180938774784468,0,0,0.291480836629851,0,0.512612642393558,0.206386867963223,0.185194527369712,0.376736914009382,1.0935538217682,0.228778173206523,0.339956859987711,0.419854356970974,0.138199973804424,0,0,0.406638934253697,0,0.418176592028937,0,0.404593039154462,0.247960367176008,0,0,0.621339313086926,0,0,0,0,0,0,0.117357238645754,0,0,0,0,1.58005560314089,0,0.205421914329655,0.25984164595559,0.895133478337407,1.19208812868759,0.961563596159751,1.62458479892035,0.807731599585181,1.06689529317,1.71404514732629,1.94915761479505,2.40529604100824,2.68816875017609,0,0,0,0,0.19318959403219,0.375364950902364,0,0.428736758158132,0.5015721040353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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=36 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:94292256..94292277,- | |||
|id=chr10:94292256..94292277,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,4.43e-12,25;CL:0000838,9.56e-10,12;CL:0000791,1.98e-09,9;CL:0000789,1.98e-09,9;CL:0002420,1.98e-09,9;CL:0002419,1.98e-09,9;CL:0000790,1.98e-09,9;CL:0000988,4.78e-09,32;CL:0002032,4.78e-09,32;CL:0000037,4.78e-09,32;CL:0000837,4.78e-09,32;CL:0000542,5.98e-09,13;CL:0000051,5.98e-09,13;CL:0000738,7.80e-09,17;CL:0002087,7.80e-09,17;CL:0000084,1.16e-07,11;CL:0000827,1.16e-07,11;CL:0000624,3.70e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.52e-11,3;DOID:4045,2.52e-11,3 | |||
|ontology_enrichment_uberon=UBERON:0001004!3.10e-10!42;UBERON:0000065!9.47e-10!41;UBERON:0004177!5.01e-09!29;UBERON:0003408!9.47e-08!24;UBERON:0002390!2.44e-07!45;UBERON:0003061!2.44e-07!45;UBERON:0002370!2.93e-07!23;UBERON:0000974!2.93e-07!23;UBERON:0004807!2.93e-07!23;UBERON:0005058!2.93e-07!23;UBERON:0003351!2.93e-07!23;UBERON:0009113!2.93e-07!23;UBERON:0003295!2.93e-07!23;UBERON:0009722!2.93e-07!23;UBERON:0005562!2.93e-07!23;UBERON:0007690!2.93e-07!23;UBERON:0002193!4.23e-07!48;UBERON:0003104!8.46e-07!131;UBERON:0009142!8.46e-07!131 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,7.46e-15,48;UBERON:0002405,7.46e-15,48;UBERON:0002390,7.87e-14,45;UBERON:0003061,7.87e-14,45;UBERON:0002370,9.13e-13,23;UBERON:0000974,9.13e-13,23;UBERON:0004807,9.13e-13,23;UBERON:0005058,9.13e-13,23;UBERON:0003351,9.13e-13,23;UBERON:0009113,9.13e-13,23;UBERON:0003295,9.13e-13,23;UBERON:0009722,9.13e-13,23;UBERON:0005562,9.13e-13,23;UBERON:0007690,9.13e-13,23;UBERON:0006562,3.67e-12,24;UBERON:0003408,3.67e-12,24;UBERON:0001557,3.67e-12,24;UBERON:0001042,3.67e-12,24;UBERON:0008814,3.67e-12,24;UBERON:0009145,3.67e-12,24;UBERON:0004177,8.63e-12,29;UBERON:0005057,8.63e-12,29;UBERON:0000072,1.29e-10,27;UBERON:0000077,1.98e-09,35;UBERON:0007811,1.56e-07,36 | |||
|phase1_expression=0,0,0,0,0,0,0,2.7115897922731,0.422366166455,0,0.34243593645101,0.239316476986009,5.9920255475922,2.71003247498892,0.999329285446988,0.607425802169478,0,3.3123527362615,5.75880621144103,5.51706547337439,0.17008658030214,0.595745707205312,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09265815368454,3.906676722619,5.23523743973798,1.76469446409304,1.36609096991689,0.971020706062307,0,0.202753862439029,0,0,0.436050312760893,0.219686182734472,0.388859798148567,0.419959264876088,0,1.67782606057736,1.45072428402269,1.68046899571232,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0.30559649555362,0.294628585473668,0.142371680799103,0,0,0.377857800533928,0,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0.216491041011214,0,0,0.34255163915718,5.43769555659061,0.445326417194474,0,0,0,0.150722640552623,0.705532242814229,0.628332956648377,0,0,0,0.161766849947409,0.441683036920787,0,1.86391761218122,0,0,0,0,0,0,0.299581278809645,0,0,0,0,0.20778804455956,0.162241263067758,0.305518091550949,0.248813941220186,0,0,0,0,0,0.30140963567143,0.136072998302656,0.12811372028485,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0.268273401399619,0,0,0,0.0810688095458557,0.146199987425332,0,0.134206418760372,0,0.308713837137853,0,0,0,0,0.38660238396628,0,0.22237804384487,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0.252946148497029,0,0.31399745568275,0.123397163921801,0,0,0.196558995113203,0.224862112384854,0.202860121388503,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0.923765950833023,0.189491411770485,0.651859905768103,0.169745085775188,0,0.167506257441816,0.476087281772027,0.195133647857799,0.630540576424764,0.664394068946325,0.478364305972461,0.491589944147214,0.518054945597687,0.867894351489069,0,1.08781136763742,0.983528546038072,0.275936746304732,0.160550589987792,0.117211686592203,0.163934945376675,0,0,0.390438744296638,0.215423397732799,0,0,0,0,0,0.395287777946524,0.642642632843614,0.141940085208269,0,0,0.494910368917606,1.32745138339963,0.242780636154981,0,0,0,0,0,0,0.356497378384721,0.632073515871632,0,0,0.340439605753788,0,0.129358683782755,0.214337035031592,0.532020700926821,0.356737635204141,0.329098041204242,0,0,0,0,0,0,0.180938774784468,0,0,0.291480836629851,0,0.512612642393558,0.206386867963223,0.185194527369712,0.376736914009382,1.0935538217682,0.228778173206523,0.339956859987711,0.419854356970974,0.138199973804424,0,0,0.406638934253697,0,0.418176592028937,0,0.404593039154462,0.247960367176008,0,0,0.621339313086926,0,0,0,0,0,0,0.117357238645754,0,0,0,0,1.58005560314089,0,0.205421914329655,0.25984164595559,0.895133478337407,1.19208812868759,0.961563596159751,1.62458479892035,0.807731599585181,1.06689529317,1.71404514732629,1.94915761479505,2.40529604100824,2.68816875017609,0,0,0,0,0.19318959403219,0.375364950902364,0,0.428736758158132,0.501572104035363,0.564751842617067,0,0,0,0,0,0,0,0.906284817968409,0,0,0,0.170733605754134,0,0,0,0.222246727801615,0,0.320919209591815,0,0,0.188626341386076,0,0.128050304809739,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0,0,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0.407412341537585,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0.214871054048298,0.191288332068843,0.441182838239031,0.231867835620421 | |||
|short_description=p@chr10:94292256..94292277,- | |||
}} |
Revision as of 18:02, 12 September 2013
Short description: | p@chr10:94292256..94292277, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:94292256..94292277, - |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 4.43e-12 | 25 |
lymphoid lineage restricted progenitor cell | 9.56e-10 | 12 |
mature alpha-beta T cell | 1.98e-09 | 9 |
alpha-beta T cell | 1.98e-09 | 9 |
immature T cell | 1.98e-09 | 9 |
mature T cell | 1.98e-09 | 9 |
immature alpha-beta T cell | 1.98e-09 | 9 |
hematopoietic cell | 4.78e-09 | 32 |
hematopoietic oligopotent progenitor cell | 4.78e-09 | 32 |
hematopoietic stem cell | 4.78e-09 | 32 |
hematopoietic multipotent progenitor cell | 4.78e-09 | 32 |
lymphocyte | 5.98e-09 | 13 |
common lymphoid progenitor | 5.98e-09 | 13 |
leukocyte | 7.80e-09 | 17 |
nongranular leukocyte | 7.80e-09 | 17 |
T cell | 1.16e-07 | 11 |
pro-T cell | 1.16e-07 | 11 |
CD4-positive, alpha-beta T cell | 3.70e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 7.46e-15 | 48 |
immune system | 7.46e-15 | 48 |
hematopoietic system | 7.87e-14 | 45 |
blood island | 7.87e-14 | 45 |
thymus | 9.13e-13 | 23 |
neck | 9.13e-13 | 23 |
respiratory system epithelium | 9.13e-13 | 23 |
hemolymphoid system gland | 9.13e-13 | 23 |
pharyngeal epithelium | 9.13e-13 | 23 |
thymic region | 9.13e-13 | 23 |
pharyngeal gland | 9.13e-13 | 23 |
entire pharyngeal arch endoderm | 9.13e-13 | 23 |
thymus primordium | 9.13e-13 | 23 |
early pharyngeal endoderm | 9.13e-13 | 23 |
pharynx | 3.67e-12 | 24 |
gland of gut | 3.67e-12 | 24 |
upper respiratory tract | 3.67e-12 | 24 |
chordate pharynx | 3.67e-12 | 24 |
pharyngeal arch system | 3.67e-12 | 24 |
pharyngeal region of foregut | 3.67e-12 | 24 |
hemopoietic organ | 8.63e-12 | 29 |
immune organ | 8.63e-12 | 29 |
segment of respiratory tract | 1.29e-10 | 27 |
mixed endoderm/mesoderm-derived structure | 1.98e-09 | 35 |
craniocervical region | 1.56e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.52e-11 | 3 |
muscle cancer | 2.52e-11 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.