FFCP PHASE1:Mm9::chr11:100054413..100054417,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=90|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:100054413..100054417,-|id=chr11:100054413..100054417,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!2.16e-17!50;UBERON:0006238!2.16e-17!50;UBERON:0000033!2.67e-16!63;UBERON:0002616!1.07e-15!49;UBERON:0000153!2.13e-13!94;UBERON:0001049!7.02e-13!52;UBERON:0005068!7.02e-13!52;UBERON:0006241!7.02e-13!52;UBERON:0007135!7.02e-13!52;UBERON:0001017!3.66e-12!73;UBERON:0005743!3.66e-12!73;UBERON:0000073!9.87e-12!75;UBERON:0001016!9.87e-12!75;UBERON:0003056!9.94e-12!49;UBERON:0002780!1.11e-11!39;UBERON:0001890!1.11e-11!39;UBERON:0006240!1.11e-11!39;UBERON:0003080!2.53e-11!40;UBERON:0002346!5.07e-11!71;UBERON:0003075!5.07e-11!71;UBERON:0007284!5.07e-11!71;UBERON:0007811!7.85e-11!86;UBERON:0002020!9.32e-10!34;UBERON:0002791!9.78e-10!29;UBERON:0003528!9.78e-10!29;UBERON:0001893!9.78e-10!29;UBERON:0004121!1.32e-09!102;UBERON:0000924!1.32e-09!102;UBERON:0006601!1.32e-09!102;UBERON:0002298!9.09e-09!6;UBERON:0002021!3.71e-08!10;UBERON:0000411!3.71e-08!10;UBERON:0001950!3.71e-08!10;UBERON:0001896!1.56e-07!2;UBERON:0005290!1.56e-07!2;UBERON:0010096!1.56e-07!2;UBERON:0000956!5.70e-07!21;UBERON:0001869!5.70e-07!21;UBERON:0000203!5.70e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0001851,8.69e-14,1;UBERON:0005889,8.69e-14,1;UBERON:0002780,9.34e-12,39;UBERON:0001890,9.34e-12,39;UBERON:0006240,9.34e-12,39;UBERON:0003080,1.81e-11,40;UBERON:0003528,4.73e-11,29;UBERON:0002791,4.73e-11,29;UBERON:0001893,4.73e-11,29;UBERON:0002616,5.37e-10,46;UBERON:0000956,6.92e-10,21;UBERON:0001869,6.92e-10,21;UBERON:0000203,6.92e-10,21;UBERON:0000955,8.68e-10,47;UBERON:0006238,8.68e-10,47;UBERON:0002020,1.81e-09,34;UBERON:0003056,2.15e-09,49;UBERON:0001049,7.33e-09,52;UBERON:0005068,7.33e-09,52;UBERON:0006241,7.33e-09,52;UBERON:0007135,7.33e-09,52;UBERON:0000073,1.54e-08,54;UBERON:0002346,3.21e-07,64;UBERON:0003075,3.21e-07,64;UBERON:0007284,3.21e-07,64;UBERON:0002619,3.57e-07,17|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0.153606533256243,0,0,0,0.279182999001381,0,0.30559649555362,0,0.284743361598206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20250421973039,0,1.91206752211504,1.27857728665165,0.20778804455956,2.10913641988085,0,0,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0,0,0,0,0.175951124163949,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,1.14579102687879,0,0,0.755393897389701,0,0.900642406448441,0,1.03552062350364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0|short_description=p@chr11:100054413..100054417,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=90 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:100054413..100054417,- | |||
|id=chr11:100054413..100054417,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!2.16e-17!50;UBERON:0006238!2.16e-17!50;UBERON:0000033!2.67e-16!63;UBERON:0002616!1.07e-15!49;UBERON:0000153!2.13e-13!94;UBERON:0001049!7.02e-13!52;UBERON:0005068!7.02e-13!52;UBERON:0006241!7.02e-13!52;UBERON:0007135!7.02e-13!52;UBERON:0001017!3.66e-12!73;UBERON:0005743!3.66e-12!73;UBERON:0000073!9.87e-12!75;UBERON:0001016!9.87e-12!75;UBERON:0003056!9.94e-12!49;UBERON:0002780!1.11e-11!39;UBERON:0001890!1.11e-11!39;UBERON:0006240!1.11e-11!39;UBERON:0003080!2.53e-11!40;UBERON:0002346!5.07e-11!71;UBERON:0003075!5.07e-11!71;UBERON:0007284!5.07e-11!71;UBERON:0007811!7.85e-11!86;UBERON:0002020!9.32e-10!34;UBERON:0002791!9.78e-10!29;UBERON:0003528!9.78e-10!29;UBERON:0001893!9.78e-10!29;UBERON:0004121!1.32e-09!102;UBERON:0000924!1.32e-09!102;UBERON:0006601!1.32e-09!102;UBERON:0002298!9.09e-09!6;UBERON:0002021!3.71e-08!10;UBERON:0000411!3.71e-08!10;UBERON:0001950!3.71e-08!10;UBERON:0001896!1.56e-07!2;UBERON:0005290!1.56e-07!2;UBERON:0010096!1.56e-07!2;UBERON:0000956!5.70e-07!21;UBERON:0001869!5.70e-07!21;UBERON:0000203!5.70e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001851,8.69e-14,1;UBERON:0005889,8.69e-14,1;UBERON:0002780,9.34e-12,39;UBERON:0001890,9.34e-12,39;UBERON:0006240,9.34e-12,39;UBERON:0003080,1.81e-11,40;UBERON:0003528,4.73e-11,29;UBERON:0002791,4.73e-11,29;UBERON:0001893,4.73e-11,29;UBERON:0002616,5.37e-10,46;UBERON:0000956,6.92e-10,21;UBERON:0001869,6.92e-10,21;UBERON:0000203,6.92e-10,21;UBERON:0000955,8.68e-10,47;UBERON:0006238,8.68e-10,47;UBERON:0002020,1.81e-09,34;UBERON:0003056,2.15e-09,49;UBERON:0001049,7.33e-09,52;UBERON:0005068,7.33e-09,52;UBERON:0006241,7.33e-09,52;UBERON:0007135,7.33e-09,52;UBERON:0000073,1.54e-08,54;UBERON:0002346,3.21e-07,64;UBERON:0003075,3.21e-07,64;UBERON:0007284,3.21e-07,64;UBERON:0002619,3.57e-07,17 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0.153606533256243,0,0,0,0.279182999001381,0,0.30559649555362,0,0.284743361598206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20250421973039,0,1.91206752211504,1.27857728665165,0.20778804455956,2.10913641988085,0,0,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0,0,0,0,0.175951124163949,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,1.14579102687879,0,0,0.755393897389701,0,0.900642406448441,0,1.03552062350364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p@chr11:100054413..100054417,- | |||
}} |
Revision as of 18:09, 12 September 2013
Short description: | p@chr11:100054413..100054417, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:100054413..100054417, - |
Coexpression cluster: | MCL_coexpression_mm9:90 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortex | 8.69e-14 | 1 |
zygote cortex | 8.69e-14 | 1 |
regional part of forebrain | 9.34e-12 | 39 |
forebrain | 9.34e-12 | 39 |
future forebrain | 9.34e-12 | 39 |
anterior neural tube | 1.81e-11 | 40 |
brain grey matter | 4.73e-11 | 29 |
regional part of telencephalon | 4.73e-11 | 29 |
telencephalon | 4.73e-11 | 29 |
regional part of brain | 5.37e-10 | 46 |
cerebral cortex | 6.92e-10 | 21 |
cerebral hemisphere | 6.92e-10 | 21 |
pallium | 6.92e-10 | 21 |
brain | 8.68e-10 | 47 |
future brain | 8.68e-10 | 47 |
gray matter | 1.81e-09 | 34 |
pre-chordal neural plate | 2.15e-09 | 49 |
neural tube | 7.33e-09 | 52 |
neural rod | 7.33e-09 | 52 |
future spinal cord | 7.33e-09 | 52 |
neural keel | 7.33e-09 | 52 |
regional part of nervous system | 1.54e-08 | 54 |
neurectoderm | 3.21e-07 | 64 |
neural plate | 3.21e-07 | 64 |
presumptive neural plate | 3.21e-07 | 64 |
regional part of cerebral cortex | 3.57e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.