FFCP PHASE1:Mm9::chr11:102526848..102526874,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=268491|HGNC=|MCL_coexpression_id=0|UniProt=A2AG06|association_with_transcript=-27bp_to_ENSMUST00000100378,NM_001127576,uc011yfv.1_5end|description=CAGE_peak_3_at_Gm1564_5end|id=chr11:102526848..102526874,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000991!1.77e-16!18;UBERON:0005564!1.77e-16!18;UBERON:0004176!4.30e-15!17;UBERON:0009196!4.30e-15!17;UBERON:0009117!4.30e-15!17;UBERON:0000473!1.85e-14!14;UBERON:0003135!2.90e-13!15;UBERON:0003101!3.21e-12!16;UBERON:0000079!3.21e-12!16;UBERON:0002323!1.22e-11!37;UBERON:0004458!1.22e-11!37;UBERON:0003133!2.95e-11!24;UBERON:0003886!3.50e-11!38;UBERON:0002553!9.49e-11!39;UBERON:0005156!4.59e-10!26;UBERON:0000990!4.59e-10!26;UBERON:0000464!3.46e-07!57|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.74e-17,14;UBERON:0003135,3.52e-16,15;UBERON:0003101,3.30e-15,16;UBERON:0000079,3.30e-15,16;UBERON:0004176,2.38e-14,17;UBERON:0009196,2.38e-14,17;UBERON:0009117,2.38e-14,17;UBERON:0000991,1.38e-13,18;UBERON:0005564,1.38e-13,18;UBERON:0003133,2.47e-10,24;UBERON:0005156,1.40e-09,26;UBERON:0000990,1.40e-09,26;UBERON:0002323,7.14e-07,37;UBERON:0004458,7.14e-07,37|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,9.35476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54488862144927,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0,0,0,0,0.229902104433473,0,0,0.136072998302656,0,0.0937017245597288,0,0,0.189106080167819,0.175951124163949,0,0,0.348252166522167,0.205782136407943,0.796137067273973,0,0,0,0.414251545071004,0,0.36012412292203,0,0,0.154267112887378,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0,0,0,0.464473343720877,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.342745537829186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0.242780636154981,0,0.188605079755898,0,0.307435147943927,0.516856586336442,0,0,0,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0,0.216010681643603,0,0.218362563746178,0.134864346384821,0.41326727862668,0,0,0,36.0763480757882,0.149516546043979,0.165458490457098,0.972255941720238,0.258319646955462,0.675824501963113,0.469428954583016,0.651021924219751,7.44501345422547,26.3326691700347,21.314220463082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.798049746802062,0,0,0.209613162627982,0,0,0,0,0.252697211763798,0.25347929989024,0,0.187283014939765,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0,0,0.0941093804153306,0.169229215783353,0.182927972872773,0,0,0.561142271657738,0.237270036248348,0,0,0.154936841185966,0,0.249810577937946,0,0,0,0,0|short_description=p3@Gm1564}} | ||
|EntrezGene=268491 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt=A2AG06 | |||
|association_with_transcript=-27bp_to_ENSMUST00000100378,NM_001127576,uc011yfv.1_5end | |||
|description=CAGE_peak_3_at_Gm1564_5end | |||
|id=chr11:102526848..102526874,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!1.77e-16!18;UBERON:0005564!1.77e-16!18;UBERON:0004176!4.30e-15!17;UBERON:0009196!4.30e-15!17;UBERON:0009117!4.30e-15!17;UBERON:0000473!1.85e-14!14;UBERON:0003135!2.90e-13!15;UBERON:0003101!3.21e-12!16;UBERON:0000079!3.21e-12!16;UBERON:0002323!1.22e-11!37;UBERON:0004458!1.22e-11!37;UBERON:0003133!2.95e-11!24;UBERON:0003886!3.50e-11!38;UBERON:0002553!9.49e-11!39;UBERON:0005156!4.59e-10!26;UBERON:0000990!4.59e-10!26;UBERON:0000464!3.46e-07!57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.74e-17,14;UBERON:0003135,3.52e-16,15;UBERON:0003101,3.30e-15,16;UBERON:0000079,3.30e-15,16;UBERON:0004176,2.38e-14,17;UBERON:0009196,2.38e-14,17;UBERON:0009117,2.38e-14,17;UBERON:0000991,1.38e-13,18;UBERON:0005564,1.38e-13,18;UBERON:0003133,2.47e-10,24;UBERON:0005156,1.40e-09,26;UBERON:0000990,1.40e-09,26;UBERON:0002323,7.14e-07,37;UBERON:0004458,7.14e-07,37 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,9.35476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54488862144927,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0,0,0,0,0.229902104433473,0,0,0.136072998302656,0,0.0937017245597288,0,0,0.189106080167819,0.175951124163949,0,0,0.348252166522167,0.205782136407943,0.796137067273973,0,0,0,0.414251545071004,0,0.36012412292203,0,0,0.154267112887378,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0,0,0,0.464473343720877,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.342745537829186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0.242780636154981,0,0.188605079755898,0,0.307435147943927,0.516856586336442,0,0,0,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0,0.216010681643603,0,0.218362563746178,0.134864346384821,0.41326727862668,0,0,0,36.0763480757882,0.149516546043979,0.165458490457098,0.972255941720238,0.258319646955462,0.675824501963113,0.469428954583016,0.651021924219751,7.44501345422547,26.3326691700347,21.314220463082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.798049746802062,0,0,0.209613162627982,0,0,0,0,0.252697211763798,0.25347929989024,0,0.187283014939765,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0,0,0.0941093804153306,0.169229215783353,0.182927972872773,0,0,0.561142271657738,0.237270036248348,0,0,0.154936841185966,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p3@Gm1564 | |||
}} |
Revision as of 18:21, 12 September 2013
Short description: | p3@Gm1564 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Gm1564_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -27bp_to_ENSMUST00000100378, NM_001127576, uc011yfv.1_5end |
EntrezGene: | Gm1564 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 2.74e-17 | 14 |
male reproductive organ | 3.52e-16 | 15 |
male organism | 3.30e-15 | 16 |
male reproductive system | 3.30e-15 | 16 |
external genitalia | 2.38e-14 | 17 |
indifferent external genitalia | 2.38e-14 | 17 |
indifferent gonad | 2.38e-14 | 17 |
gonad | 1.38e-13 | 18 |
gonad primordium | 1.38e-13 | 18 |
reproductive organ | 2.47e-10 | 24 |
reproductive structure | 1.40e-09 | 26 |
reproductive system | 1.40e-09 | 26 |
body cavity | 7.14e-07 | 37 |
body cavity or lining | 7.14e-07 | 37 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.