FFCP PHASE1:Mm9::chr11:120645622..120645659,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=209318|HGNC=|MCL_coexpression_id=1|UniProt=Q3MIA8|association_with_transcript=3bp_to_ENSMUST00000116305_5end|description=CAGE_peak_3_at_Gps1_5end|id=chr11:120645622..120645659,+|ontology_enrichment_celltype=CL:0000117!1.33e-07!23;CL:0000337!1.33e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,2.59e-09,23;CL:0000337,2.59e-09,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.43e-19!52;UBERON:0005068!2.43e-19!52;UBERON:0006241!2.43e-19!52;UBERON:0007135!2.43e-19!52;UBERON:0000033!1.40e-18!63;UBERON:0001017!7.84e-18!73;UBERON:0005743!7.84e-18!73;UBERON:0000955!2.35e-17!50;UBERON:0006238!2.35e-17!50;UBERON:0002616!2.44e-17!49;UBERON:0000073!6.91e-17!75;UBERON:0001016!6.91e-17!75;UBERON:0004121!9.01e-17!102;UBERON:0000924!9.01e-17!102;UBERON:0006601!9.01e-17!102;UBERON:0002346!6.59e-16!71;UBERON:0003075!6.59e-16!71;UBERON:0007284!6.59e-16!71;UBERON:0003056!4.39e-15!49;UBERON:0003080!8.73e-15!40;UBERON:0002780!2.46e-14!39;UBERON:0001890!2.46e-14!39;UBERON:0006240!2.46e-14!39;UBERON:0002020!3.79e-13!34;UBERON:0000153!1.15e-12!94;UBERON:0007811!1.51e-12!86;UBERON:0002791!2.79e-10!29;UBERON:0003528!2.79e-10!29;UBERON:0001893!2.79e-10!29;UBERON:0000475!1.46e-07!200;UBERON:0002021!1.48e-07!10;UBERON:0000411!1.48e-07!10;UBERON:0001950!1.48e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.84e-25,54;UBERON:0001049,2.08e-23,52;UBERON:0005068,2.08e-23,52;UBERON:0006241,2.08e-23,52;UBERON:0007135,2.08e-23,52;UBERON:0001017,4.10e-22,73;UBERON:0002346,5.28e-22,64;UBERON:0003075,5.28e-22,64;UBERON:0007284,5.28e-22,64;UBERON:0010371,4.44e-21,73;UBERON:0001016,8.89e-21,75;UBERON:0004121,1.21e-20,95;UBERON:0000924,1.21e-20,95;UBERON:0006601,1.21e-20,95;UBERON:0000955,3.35e-19,47;UBERON:0006238,3.35e-19,47;UBERON:0002616,3.46e-19,46;UBERON:0003056,5.81e-18,49;UBERON:0003080,7.29e-18,40;UBERON:0002780,2.50e-17,39;UBERON:0001890,2.50e-17,39;UBERON:0006240,2.50e-17,39;UBERON:0002020,6.15e-16,34;UBERON:0003528,1.64e-12,29;UBERON:0002791,1.64e-12,29;UBERON:0001893,1.64e-12,29;UBERON:0010314,7.78e-12,92;UBERON:0002021,1.24e-08,10;UBERON:0000411,1.24e-08,10;UBERON:0001950,1.24e-08,10;UBERON:0002619,3.85e-08,17;UBERON:0000956,9.28e-08,21;UBERON:0001869,9.28e-08,21;UBERON:0000203,9.28e-08,21;UBERON:0004111,3.51e-07,122|phase1_expression=3.20297694209588,0.348975407639361,1.36499771816861,1.20985684522732,2.00358291978539,1.34303417529512,0.467225281191051,1.29123323441576,7.180224829735,4.68129052643987,7.36237263369671,6.38177271962691,0.513602189793617,0.786783621770977,0,0.809901069559304,0,0.788655413395594,0.274228867211478,0,1.78590909317247,0.794327609607082,0.522399578277871,0.95995453676044,1.14704640533585,1.14846392823004,0,0.861884930743556,0.760093677825496,0.756090389279792,0.443461021310609,3.17515336729816,1.84519436275371,0,0.288851619751275,0.997407872150954,1.22501613757421,0.418531630736908,0.7813353445238,0,0.588231488031014,0,0.971020706062307,1.51076181570693,2.02753862439029,2.9367480345869,2.34717403304412,0.436050312760893,1.5378032791413,1.36100929351998,1.1198913730029,1.43752564364972,1.00669563634642,4.35217285206807,0.672187598284928,1.54355661621568,0,1.03134418455488,3.84401275633236,3.70293685490423,1.90149421051854,2.03306719241479,0,0.899899717281399,0,1.4209602298922,3.59520132622086,0.384218305321555,1.24427534770173,1.08004750665353,0.420649922702764,7.42692559449889,5.07997644188711,1.22490799214954,1.34183659425531,0,2.20231761998777,4.46905683298157,4.91540906419979,3.56092976871523,3.93396867490361,2.6045668527838,8.93385596804419,6.19038871034848,6.72312290217964,4.12480019663135,5.41012387036591,5.40558392893372,0.454357159999104,0.755715601067855,1.15945795480671,1.72084775396277,0,2.69851595818909,0.649776417447669,0.448026887097336,0.702222100658759,0.681721290312231,1.29893002301434,0.70667914902068,2.81686839553361,0,0,0,1.29894624606728,1.52015919285059,0.505524445014783,0.79928715803342,0,0.742210695324124,0.867426633830679,0.913396434936424,1.15307748628029,0.452167921657868,1.05829836422134,0.628332956648377,1.23597483867187,0.144599356919912,0,1.29413479957927,0.662524555381181,0.484875253135222,5.59175283654366,2.04946557908083,1.46612694769419,0.510914110417183,0.479260498023681,0.599902730993408,0.508280908292259,2.99581278809645,3.66000482254901,4.02093926761166,4.69325664519146,7.16003280524926,4.57133698031032,4.70499662896497,1.2220723662038,0.870848794270651,6.57079171927554,2.31486041475121,1.95180664444056,2.98872735763515,1.80062129805349,0.452114453507145,1.2246569847239,1.2811372028485,1.40552586839593,0.776110112217047,1.72454394346274,1.51284864134255,1.05570674498369,1.7535658594206,1.66828349535359,0.348252166522167,2.05782136407943,1.59227413454795,0,0,1.13665399758237,1.03562886267751,0.938104239924385,0.36012412292203,0.710234206755631,0.590292695242212,0.308534225774757,0.465067889500816,0.536546802799238,0.583826711835847,0,0.164167464079095,0.324275238183423,0.4385999622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| ||
|EntrezGene=209318 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q3MIA8 | |||
|association_with_transcript=3bp_to_ENSMUST00000116305_5end | |||
|description=CAGE_peak_3_at_Gps1_5end | |||
|id=chr11:120645622..120645659,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.33e-07!23;CL:0000337!1.33e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.59e-09,23;CL:0000337,2.59e-09,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.43e-19!52;UBERON:0005068!2.43e-19!52;UBERON:0006241!2.43e-19!52;UBERON:0007135!2.43e-19!52;UBERON:0000033!1.40e-18!63;UBERON:0001017!7.84e-18!73;UBERON:0005743!7.84e-18!73;UBERON:0000955!2.35e-17!50;UBERON:0006238!2.35e-17!50;UBERON:0002616!2.44e-17!49;UBERON:0000073!6.91e-17!75;UBERON:0001016!6.91e-17!75;UBERON:0004121!9.01e-17!102;UBERON:0000924!9.01e-17!102;UBERON:0006601!9.01e-17!102;UBERON:0002346!6.59e-16!71;UBERON:0003075!6.59e-16!71;UBERON:0007284!6.59e-16!71;UBERON:0003056!4.39e-15!49;UBERON:0003080!8.73e-15!40;UBERON:0002780!2.46e-14!39;UBERON:0001890!2.46e-14!39;UBERON:0006240!2.46e-14!39;UBERON:0002020!3.79e-13!34;UBERON:0000153!1.15e-12!94;UBERON:0007811!1.51e-12!86;UBERON:0002791!2.79e-10!29;UBERON:0003528!2.79e-10!29;UBERON:0001893!2.79e-10!29;UBERON:0000475!1.46e-07!200;UBERON:0002021!1.48e-07!10;UBERON:0000411!1.48e-07!10;UBERON:0001950!1.48e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.84e-25,54;UBERON:0001049,2.08e-23,52;UBERON:0005068,2.08e-23,52;UBERON:0006241,2.08e-23,52;UBERON:0007135,2.08e-23,52;UBERON:0001017,4.10e-22,73;UBERON:0002346,5.28e-22,64;UBERON:0003075,5.28e-22,64;UBERON:0007284,5.28e-22,64;UBERON:0010371,4.44e-21,73;UBERON:0001016,8.89e-21,75;UBERON:0004121,1.21e-20,95;UBERON:0000924,1.21e-20,95;UBERON:0006601,1.21e-20,95;UBERON:0000955,3.35e-19,47;UBERON:0006238,3.35e-19,47;UBERON:0002616,3.46e-19,46;UBERON:0003056,5.81e-18,49;UBERON:0003080,7.29e-18,40;UBERON:0002780,2.50e-17,39;UBERON:0001890,2.50e-17,39;UBERON:0006240,2.50e-17,39;UBERON:0002020,6.15e-16,34;UBERON:0003528,1.64e-12,29;UBERON:0002791,1.64e-12,29;UBERON:0001893,1.64e-12,29;UBERON:0010314,7.78e-12,92;UBERON:0002021,1.24e-08,10;UBERON:0000411,1.24e-08,10;UBERON:0001950,1.24e-08,10;UBERON:0002619,3.85e-08,17;UBERON:0000956,9.28e-08,21;UBERON:0001869,9.28e-08,21;UBERON:0000203,9.28e-08,21;UBERON:0004111,3.51e-07,122 | |||
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| |||
|short_description=p3@Gps1 | |||
}} |
Revision as of 19:08, 12 September 2013
Short description: | p3@Gps1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Gps1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 3bp_to_ENSMUST00000116305_5end |
EntrezGene: | Gps1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.