FFCP PHASE1:Mm9::chr11:17805943..17805945,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=649|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:17805943..17805945,+|id=chr11:17805943..17805945,+|ontology_enrichment_celltype=CL:0000063!2.04e-25!66;CL:0000144!9.62e-20!121;CL:0000012!9.62e-20!121;CL:0002371!6.21e-17!118;CL:0000548!2.14e-15!115;CL:0000004!2.14e-15!115;CL:0000255!2.14e-15!115;CL:0000988!7.68e-15!32;CL:0002032!7.68e-15!32;CL:0000037!7.68e-15!32;CL:0000566!7.68e-15!32;CL:0000837!7.68e-15!32;CL:0002320!1.31e-12!46;CL:0000134!1.31e-12!46;CL:0002076!2.22e-12!15;CL:0000050!2.97e-12!9;CL:0000219!4.16e-12!54;CL:0000066!4.92e-12!25;CL:0002031!8.81e-12!25;CL:0000049!1.40e-11!19;CL:0000034!4.09e-11!97;CL:0000223!2.29e-10!20;CL:0002563!2.57e-08!9;CL:0002251!2.57e-08!9;CL:0000839!5.94e-08!13;CL:0000763!7.31e-08!16;CL:0000553!1.38e-07!6;CL:0000556!1.38e-07!6;CL:0000723!5.37e-07!91;CL:0000048!5.37e-07!91;CL:0000068!8.27e-07!3;CL:0002202!8.27e-07!3;CL:0000069!8.27e-07!3;CL:0002632!8.27e-07!3;CL:0002368!8.27e-07!3;CL:0000307!8.27e-07!3;CL:0000377!8.27e-07!3|ontology_enrichment_celltype_v019_2=CL:0002076,1.86e-12,15;CL:0000049,1.91e-12,19;CL:0000223,2.62e-11,20;CL:0000068,6.66e-11,3;CL:0002202,6.66e-11,3;CL:0000069,6.66e-11,3;CL:0002632,6.66e-11,3;CL:0002368,6.66e-11,3;CL:0000307,6.66e-11,3;CL:0000377,6.66e-11,3;CL:0002250,1.56e-09,3;CL:0000050,2.43e-09,9;CL:0000034,6.28e-09,97;CL:0000066,9.63e-09,25;CL:0000988,1.97e-08,32;CL:0002032,1.97e-08,32;CL:0000037,1.97e-08,32;CL:0000837,1.97e-08,32;CL:0002320,8.63e-08,46;CL:0000134,8.63e-08,46;CL:0000219,1.94e-07,54;CL:0000763,4.82e-07,16|ontology_enrichment_disease=DOID:0050686!1.89e-07!6|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.42e-13!15;UBERON:0002384!1.31e-12!46;UBERON:0001242!7.72e-11!13;UBERON:0000060!7.72e-11!13;UBERON:0001262!7.72e-11!13;UBERON:0004786!7.72e-11!13;UBERON:0000485!1.84e-08!11;UBERON:0003350!2.57e-08!9;UBERON:0004808!2.57e-08!9;UBERON:0001277!2.57e-08!9;UBERON:0004923!1.99e-07!24;UBERON:0003126!8.27e-07!3;UBERON:0001005!8.27e-07!3;UBERON:0007196!8.27e-07!3;UBERON:0001558!8.27e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0003126,6.66e-11,3;UBERON:0001005,6.66e-11,3;UBERON:0007196,6.66e-11,3;UBERON:0001558,6.66e-11,3;UBERON:0000344,7.15e-09,15;UBERON:0002384,8.63e-08,46;UBERON:0001962,8.62e-07,2;UBERON:0001961,8.62e-07,2;UBERON:0001744,8.62e-07,2|phase1_expression=0,0.697950815278722,0,0,0.500895729946347,0.33575854382378,2.80335168714631,0.129123323441576,0,0,0.171217968225505,0,0.171200729931206,0,0,11.5410902412201,26.5833513688696,0.788655413395594,0.685572168028694,2.97072756258621,0,0,6.52999472847338,1.11994695955385,2.98232065387321,0,0.430761996159075,0.215471232685889,1.52018735565099,0.252030129759931,0.665191531965914,42.5470551217953,0.61506478758457,15.8481681015439,2.59966457776147,2.1610503896604,1.63335485009895,0.418531630736908,3.906676722619,0,0.588231488031014,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0.671130424230945,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,1.28471652181535,1.44932244350839,0,0,0,0,0,0,0,0.519572009205738,4.59341446863442,0.563373679106722,5.13305909657271,0,0,9.09262372247099,8.36087556067825,13.6491600153991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43778149407104,5.39912457894067,1.65191295194984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.60287069960601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01987057996313,0.979660166265606,1.24379976423981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.21560669447381,0.179427713218951,3.52557694364565,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:17805943..17805945,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=649 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:17805943..17805945,+ | |||
|id=chr11:17805943..17805945,+ | |||
|ontology_enrichment_celltype=CL:0000063!2.04e-25!66;CL:0000144!9.62e-20!121;CL:0000012!9.62e-20!121;CL:0002371!6.21e-17!118;CL:0000548!2.14e-15!115;CL:0000004!2.14e-15!115;CL:0000255!2.14e-15!115;CL:0000988!7.68e-15!32;CL:0002032!7.68e-15!32;CL:0000037!7.68e-15!32;CL:0000566!7.68e-15!32;CL:0000837!7.68e-15!32;CL:0002320!1.31e-12!46;CL:0000134!1.31e-12!46;CL:0002076!2.22e-12!15;CL:0000050!2.97e-12!9;CL:0000219!4.16e-12!54;CL:0000066!4.92e-12!25;CL:0002031!8.81e-12!25;CL:0000049!1.40e-11!19;CL:0000034!4.09e-11!97;CL:0000223!2.29e-10!20;CL:0002563!2.57e-08!9;CL:0002251!2.57e-08!9;CL:0000839!5.94e-08!13;CL:0000763!7.31e-08!16;CL:0000553!1.38e-07!6;CL:0000556!1.38e-07!6;CL:0000723!5.37e-07!91;CL:0000048!5.37e-07!91;CL:0000068!8.27e-07!3;CL:0002202!8.27e-07!3;CL:0000069!8.27e-07!3;CL:0002632!8.27e-07!3;CL:0002368!8.27e-07!3;CL:0000307!8.27e-07!3;CL:0000377!8.27e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.86e-12,15;CL:0000049,1.91e-12,19;CL:0000223,2.62e-11,20;CL:0000068,6.66e-11,3;CL:0002202,6.66e-11,3;CL:0000069,6.66e-11,3;CL:0002632,6.66e-11,3;CL:0002368,6.66e-11,3;CL:0000307,6.66e-11,3;CL:0000377,6.66e-11,3;CL:0002250,1.56e-09,3;CL:0000050,2.43e-09,9;CL:0000034,6.28e-09,97;CL:0000066,9.63e-09,25;CL:0000988,1.97e-08,32;CL:0002032,1.97e-08,32;CL:0000037,1.97e-08,32;CL:0000837,1.97e-08,32;CL:0002320,8.63e-08,46;CL:0000134,8.63e-08,46;CL:0000219,1.94e-07,54;CL:0000763,4.82e-07,16 | |||
|ontology_enrichment_disease=DOID:0050686!1.89e-07!6 | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.42e-13!15;UBERON:0002384!1.31e-12!46;UBERON:0001242!7.72e-11!13;UBERON:0000060!7.72e-11!13;UBERON:0001262!7.72e-11!13;UBERON:0004786!7.72e-11!13;UBERON:0000485!1.84e-08!11;UBERON:0003350!2.57e-08!9;UBERON:0004808!2.57e-08!9;UBERON:0001277!2.57e-08!9;UBERON:0004923!1.99e-07!24;UBERON:0003126!8.27e-07!3;UBERON:0001005!8.27e-07!3;UBERON:0007196!8.27e-07!3;UBERON:0001558!8.27e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,6.66e-11,3;UBERON:0001005,6.66e-11,3;UBERON:0007196,6.66e-11,3;UBERON:0001558,6.66e-11,3;UBERON:0000344,7.15e-09,15;UBERON:0002384,8.63e-08,46;UBERON:0001962,8.62e-07,2;UBERON:0001961,8.62e-07,2;UBERON:0001744,8.62e-07,2 | |||
|phase1_expression=0,0.697950815278722,0,0,0.500895729946347,0.33575854382378,2.80335168714631,0.129123323441576,0,0,0.171217968225505,0,0.171200729931206,0,0,11.5410902412201,26.5833513688696,0.788655413395594,0.685572168028694,2.97072756258621,0,0,6.52999472847338,1.11994695955385,2.98232065387321,0,0.430761996159075,0.215471232685889,1.52018735565099,0.252030129759931,0.665191531965914,42.5470551217953,0.61506478758457,15.8481681015439,2.59966457776147,2.1610503896604,1.63335485009895,0.418531630736908,3.906676722619,0,0.588231488031014,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0.671130424230945,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,1.28471652181535,1.44932244350839,0,0,0,0,0,0,0,0.519572009205738,4.59341446863442,0.563373679106722,5.13305909657271,0,0,9.09262372247099,8.36087556067825,13.6491600153991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43778149407104,5.39912457894067,1.65191295194984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.60287069960601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01987057996313,0.979660166265606,1.24379976423981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.21560669447381,0.179427713218951,3.52557694364565,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:17805943..17805945,+ | |||
}} |
Revision as of 19:12, 12 September 2013
Short description: | p@chr11:17805943..17805945, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:17805943..17805945, + |
Coexpression cluster: | MCL_coexpression_mm9:649 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.86e-12 | 15 |
common myeloid progenitor | 1.91e-12 | 19 |
endodermal cell | 2.62e-11 | 20 |
duct epithelial cell | 6.66e-11 | 3 |
epithelial cell of tracheobronchial tree | 6.66e-11 | 3 |
branched duct epithelial cell | 6.66e-11 | 3 |
epithelial cell of lower respiratory tract | 6.66e-11 | 3 |
respiratory epithelial cell | 6.66e-11 | 3 |
tracheal epithelial cell | 6.66e-11 | 3 |
tracheoblast | 6.66e-11 | 3 |
intestinal crypt stem cell | 1.56e-09 | 3 |
megakaryocyte-erythroid progenitor cell | 2.43e-09 | 9 |
stem cell | 6.28e-09 | 97 |
epithelial cell | 9.63e-09 | 25 |
hematopoietic cell | 1.97e-08 | 32 |
hematopoietic oligopotent progenitor cell | 1.97e-08 | 32 |
hematopoietic stem cell | 1.97e-08 | 32 |
hematopoietic multipotent progenitor cell | 1.97e-08 | 32 |
connective tissue cell | 8.63e-08 | 46 |
mesenchymal cell | 8.63e-08 | 46 |
motile cell | 1.94e-07 | 54 |
myeloid cell | 4.82e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
trachea | 6.66e-11 | 3 |
respiratory airway | 6.66e-11 | 3 |
tracheobronchial tree | 6.66e-11 | 3 |
lower respiratory tract | 6.66e-11 | 3 |
mucosa | 7.15e-09 | 15 |
connective tissue | 8.63e-08 | 46 |
gut-associated lymphoid tissue | 8.62e-07 | 2 |
mucosa-associated lymphoid tissue | 8.62e-07 | 2 |
lymphoid tissue | 8.62e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.