FFCP PHASE1:Hg19::chr3:182887417..182887421,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C681|description=CAGE_peak_at_chr3:182887417..182887421,-|id=chr3:182887417..182887421,-|ontology_enrichment_celltype=CL:0002057!1.30e-34!42;CL:0000860!5.40e-32!45;CL:0000738!2.13e-29!140;CL:0002009!5.30e-28!65;CL:0000557!7.53e-28!71;CL:0002194!3.37e-26!63;CL:0000576!3.37e-26!63;CL:0000040!3.37e-26!63;CL:0000559!3.37e-26!63;CL:0000839!1.22e-25!70;CL:0002031!2.17e-25!124;CL:0002087!1.54e-24!119;CL:0000037!3.82e-24!172;CL:0000566!3.82e-24!172;CL:0002032!7.79e-24!165;CL:0000837!7.79e-24!165;CL:0000766!3.16e-23!76;CL:0000763!5.27e-23!112;CL:0000049!5.27e-23!112;CL:0000988!2.13e-22!182;CL:0000990!4.55e-18!8;CL:0000453!1.54e-15!5;CL:0000451!1.15e-14!10;CL:0000134!2.38e-08!358;CL:0002320!4.86e-08!365;CL:0000840!2.96e-07!5;CL:0001029!2.96e-07!5;CL:0000219!5.92e-07!390|ontology_enrichment_celltype_v019=CL:0000453;3.41e-49;5!CL:0000990;1.45e-27;8!CL:0000451;1.24e-22;10!CL:0000860;1.31e-19;33!CL:0002057;1.31e-19;33!CL:0000473;4.39e-15;39!CL:0000234;4.39e-15;39!CL:0001014;6.93e-09;2!CL:0001016;6.93e-09;2!CL:0000576;1.92e-08;48!CL:0000766;3.06e-08;69!CL:0000738;3.69e-07;136|ontology_enrichment_celltype_v019_2=CL:0000453,3.21e-49,5;CL:0000990,1.40e-27,8;CL:0000451,1.20e-22,10;CL:0000738,9.17e-18,136;CL:0000860,2.07e-17,42;CL:0002057,2.07e-17,42;CL:0000763,5.27e-16,108;CL:0000049,5.27e-16,108;CL:0000473,3.47e-15,48;CL:0000234,3.47e-15,48;CL:0002009,4.00e-15,61;CL:0002032,7.41e-15,161;CL:0000837,7.41e-15,161;CL:0000037,3.40e-14,168;CL:0000557,9.77e-14,67;CL:0000988,2.02e-13,177;CL:0002194,4.60e-12,59;CL:0000576,4.60e-12,59;CL:0000040,4.60e-12,59;CL:0000559,4.60e-12,59;CL:0002031,1.17e-11,120;CL:0000839,9.35e-11,66;CL:0002087,7.50e-10,115;CL:0000766,7.83e-10,72;CL:0001014,8.09e-09,2;CL:0001016,8.09e-09,2|ontology_enrichment_development_v019=CL:0002057;3.33e-13;42|ontology_enrichment_disease=DOID:0060058!1.65e-10!10|ontology_enrichment_disease_v019=DOID:630;1.93e-16;1!DOID:0050177;1.93e-16;1!DOID:0050427;1.93e-16;1|ontology_enrichment_disease_v019_2=DOID:630,1.93e-16,1;DOID:0050177,1.93e-16,1;DOID:0050427,1.93e-16,1|ontology_enrichment_uberon=UBERON:0002390!2.74e-25!102;UBERON:0003061!2.74e-25!102;UBERON:0002193!2.34e-24!112;UBERON:0002371!3.91e-24!80;UBERON:0001474!4.37e-22!86;UBERON:0002405!1.00e-21!115;UBERON:0004765!5.03e-18!101;UBERON:0001434!5.03e-18!101;UBERON:0002204!7.58e-09!167;UBERON:0003081!9.81e-09!216;UBERON:0002384!1.28e-07!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.67e-12,76;UBERON:0001474,3.87e-11,82;UBERON:0004765,4.22e-10,90;UBERON:0002405,9.32e-10,93;UBERON:0002390,3.14e-09,98;UBERON:0003061,3.14e-09,98;UBERON:0001434,4.94e-09,100;UBERON:0002193,2.56e-08,108|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0,0,0,0,0,0,0,0.0774672005803016,0.284338464974843,0,0,0.401088894940283,0.651032612147555,0,0,0,0,0,0,0,0,0.309706370895104,0.28769239232215,0.512321413058201,0,1.03423704220986,1.93645405075148,2.70852973188684,0.376484679085209,0,0,0.306083892370903,0.641858054152187,0.639337125799041,0,0,0,0.290209238628584,4.53908179752912,1.86846674698672,0,0.521482918420201,0,0.605399502633369,5.89244217580104,3.79754864929061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649094787309367,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274083849293502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5748172408605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,1.58330377895165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.26122833866349,1.99297260470045,12.1038391749325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C681 | |||
|description=CAGE_peak_at_chr3:182887417..182887421,- | |||
|id=chr3:182887417..182887421,- | |||
|ontology_enrichment_celltype=CL:0002057!1.30e-34!42;CL:0000860!5.40e-32!45;CL:0000738!2.13e-29!140;CL:0002009!5.30e-28!65;CL:0000557!7.53e-28!71;CL:0002194!3.37e-26!63;CL:0000576!3.37e-26!63;CL:0000040!3.37e-26!63;CL:0000559!3.37e-26!63;CL:0000839!1.22e-25!70;CL:0002031!2.17e-25!124;CL:0002087!1.54e-24!119;CL:0000037!3.82e-24!172;CL:0000566!3.82e-24!172;CL:0002032!7.79e-24!165;CL:0000837!7.79e-24!165;CL:0000766!3.16e-23!76;CL:0000763!5.27e-23!112;CL:0000049!5.27e-23!112;CL:0000988!2.13e-22!182;CL:0000990!4.55e-18!8;CL:0000453!1.54e-15!5;CL:0000451!1.15e-14!10;CL:0000134!2.38e-08!358;CL:0002320!4.86e-08!365;CL:0000840!2.96e-07!5;CL:0001029!2.96e-07!5;CL:0000219!5.92e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000453;3.41e-49;5!CL:0000990;1.45e-27;8!CL:0000451;1.24e-22;10!CL:0000860;1.31e-19;33!CL:0002057;1.31e-19;33!CL:0000473;4.39e-15;39!CL:0000234;4.39e-15;39!CL:0001014;6.93e-09;2!CL:0001016;6.93e-09;2!CL:0000576;1.92e-08;48!CL:0000766;3.06e-08;69!CL:0000738;3.69e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,3.21e-49,5;CL:0000990,1.40e-27,8;CL:0000451,1.20e-22,10;CL:0000738,9.17e-18,136;CL:0000860,2.07e-17,42;CL:0002057,2.07e-17,42;CL:0000763,5.27e-16,108;CL:0000049,5.27e-16,108;CL:0000473,3.47e-15,48;CL:0000234,3.47e-15,48;CL:0002009,4.00e-15,61;CL:0002032,7.41e-15,161;CL:0000837,7.41e-15,161;CL:0000037,3.40e-14,168;CL:0000557,9.77e-14,67;CL:0000988,2.02e-13,177;CL:0002194,4.60e-12,59;CL:0000576,4.60e-12,59;CL:0000040,4.60e-12,59;CL:0000559,4.60e-12,59;CL:0002031,1.17e-11,120;CL:0000839,9.35e-11,66;CL:0002087,7.50e-10,115;CL:0000766,7.83e-10,72;CL:0001014,8.09e-09,2;CL:0001016,8.09e-09,2 | |||
|ontology_enrichment_development_v019=CL:0002057;3.33e-13;42 | |||
|ontology_enrichment_disease=DOID:0060058!1.65e-10!10 | |||
|ontology_enrichment_disease_v019=DOID:630;1.93e-16;1!DOID:0050177;1.93e-16;1!DOID:0050427;1.93e-16;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,1.93e-16,1;DOID:0050177,1.93e-16,1;DOID:0050427,1.93e-16,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.74e-25!102;UBERON:0003061!2.74e-25!102;UBERON:0002193!2.34e-24!112;UBERON:0002371!3.91e-24!80;UBERON:0001474!4.37e-22!86;UBERON:0002405!1.00e-21!115;UBERON:0004765!5.03e-18!101;UBERON:0001434!5.03e-18!101;UBERON:0002204!7.58e-09!167;UBERON:0003081!9.81e-09!216;UBERON:0002384!1.28e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.67e-12,76;UBERON:0001474,3.87e-11,82;UBERON:0004765,4.22e-10,90;UBERON:0002405,9.32e-10,93;UBERON:0002390,3.14e-09,98;UBERON:0003061,3.14e-09,98;UBERON:0001434,4.94e-09,100;UBERON:0002193,2.56e-08,108 | |||
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|short_description=p@chr3:182887417..182887421,- | |||
}} |
Revision as of 22:57, 12 September 2013
Short description: | p@chr3:182887417..182887421, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:182887417..182887421, - |
Coexpression cluster: | C681_immature_CD14_migratory_CD34_Eosinophils_Basophils_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 3.21e-49 | 5 |
conventional dendritic cell | 1.40e-27 | 8 |
dendritic cell | 1.20e-22 | 10 |
leukocyte | 9.17e-18 | 136 |
classical monocyte | 2.07e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.07e-17 | 42 |
myeloid cell | 5.27e-16 | 108 |
common myeloid progenitor | 5.27e-16 | 108 |
defensive cell | 3.47e-15 | 48 |
phagocyte | 3.47e-15 | 48 |
macrophage dendritic cell progenitor | 4.00e-15 | 61 |
hematopoietic oligopotent progenitor cell | 7.41e-15 | 161 |
hematopoietic multipotent progenitor cell | 7.41e-15 | 161 |
hematopoietic stem cell | 3.40e-14 | 168 |
granulocyte monocyte progenitor cell | 9.77e-14 | 67 |
hematopoietic cell | 2.02e-13 | 177 |
monopoietic cell | 4.60e-12 | 59 |
monocyte | 4.60e-12 | 59 |
monoblast | 4.60e-12 | 59 |
promonocyte | 4.60e-12 | 59 |
hematopoietic lineage restricted progenitor cell | 1.17e-11 | 120 |
myeloid lineage restricted progenitor cell | 9.35e-11 | 66 |
nongranular leukocyte | 7.50e-10 | 115 |
myeloid leukocyte | 7.83e-10 | 72 |
CD1a-positive Langerhans cell | 8.09e-09 | 2 |
immature CD1a-positive Langerhans cell | 8.09e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.67e-12 | 76 |
bone element | 3.87e-11 | 82 |
skeletal element | 4.22e-10 | 90 |
immune system | 9.32e-10 | 93 |
hematopoietic system | 3.14e-09 | 98 |
blood island | 3.14e-09 | 98 |
skeletal system | 4.94e-09 | 100 |
hemolymphoid system | 2.56e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.93e-16 | 1 |
monogenic disease | 1.93e-16 | 1 |
xeroderma pigmentosum | 1.93e-16 | 1 |
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