FFCP PHASE1:Mm9::chr12:75065531..75065550,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=75627|HGNC=|MCL_coexpression_id=7|UniProt=Q8K0S9|association_with_transcript=14bp_to_ENSMUST00000021532,NM_178392,uc007nwt.1_5end|description=CAGE_peak_2_at_Snapc1_5end|id=chr12:75065531..75065550,+|ontology_enrichment_celltype=CL:0000838!5.05e-07!12;CL:0000791!6.11e-07!9;CL:0000789!6.11e-07!9;CL:0002420!6.11e-07!9;CL:0002419!6.11e-07!9;CL:0000790!6.11e-07!9;CL:0000542!6.93e-07!13;CL:0000051!6.93e-07!13|ontology_enrichment_celltype_v019_2=CL:0000838,2.57e-08,12;CL:0000791,2.61e-08,9;CL:0000789,2.61e-08,9;CL:0002420,2.61e-08,9;CL:0002419,2.61e-08,9;CL:0000790,2.61e-08,9;CL:0000542,3.78e-08,13;CL:0000051,3.78e-08,13;CL:0000084,1.54e-07,11;CL:0000827,1.54e-07,11;CL:0000624,1.84e-07,8;CL:0000738,1.92e-07,17;CL:0002087,1.92e-07,17|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=1.12104192973356,1.04692622291808,1.81999695755814,3.0246421130683,1.00179145989269,0.839396359559449,0.700837921786577,4.00282302668886,14.6420271037733,14.7460651582856,1.88339765048055,2.6324812468461,3.93761678841773,3.2345548895029,0.333109761815663,0,0,0.630924330716475,1.23402990245165,1.27316895539409,0.595303031057488,0.595745707205312,1.82839852397255,0.47997726838022,1.14704640533585,0.57423196411502,1.7230479846363,0.861884930743556,0.190023419456374,0.252030129759931,0.443461021310609,0.635030673459631,0.61506478758457,0,0.866554859253824,0.664938581433969,1.22501613757421,2.51118978442145,1.5626706890476,2.09409497589519,4.1176204162171,3.41522742479223,3.39857247121808,2.14024590558481,1.72340783073175,2.20256102594018,0,0,0,0.388859798148567,0,0,4.02678254538567,4.35217285206807,5.71359458542189,0.771778308107841,0,0,0,0,0,0,0,0.449949858640699,0,0.7104801149461,0,0.384218305321555,0.311068836925433,0.270011876663381,0.630974884054146,1.42825492201902,0,0.489963196859816,0.191690942036473,0,0,0.893811366596314,0.307213066512487,0.791317726381163,0.548925861614458,1.56274011167028,0.558365998002762,0.56276261003168,1.5279824777681,0,0.427115042397309,0.745597783301202,0.37863096666592,0.226714680320357,3.18850937571846,0.860423876981386,0,0,1.29955283489534,0.896053774194671,1.26399978118577,1.02258193546835,1.03914401841148,0.35333957451034,0.563373679106722,0,0,0,1.08245520505607,1.52015919285059,1.01104889002957,0.68510327831436,1.03575153458869,0.148442139064825,1.73485326766136,0.608930956624282,2.53677046981664,3.3158980921577,1.17588707135705,0.628332956648377,2.47194967734374,0.433798070759735,0.884610551949874,0.485300549842228,0.441683036920787,0.969750506270444,0,0.878342391034642,0.628340120440365,0.510914110417183,2.87556298814209,0.599902730993408,2.28726408731516,1.9472783122627,0.915001205637253,2.38743269014442,2.25971616249959,1.53429274398198,0.83115217823824,1.1356888414743,0.407357455401265,0.497627882440372,0.758168275301024,0.631325567659422,1.43132487258974,2.29902104433473,1.80062129805349,2.10986744970001,1.29269348387523,1.92170580427275,0.937017245597288,1.55222022443409,0.215567992932842,1.32374256117473,1.58356011747554,0.219195732427575,1.11218899690239,0.696504333044333,1.23469281844766,1.79130840136644,5.61770549850588,4.88961023517959,3.12579849335152,1.44988040774851,1.87620847984877,1.08037236876609,1.42046841351126,0.787056926989615,1.07986979021165,0.697601834251224,1.07309360559848,0.350296027101508,0.493679549740441,0.985004784474571,0.891756905004413,1.16959989940266,0.658650345873152,0.805238512562231,1.89260953707715,1.13195073617213,0.991256348951394,0,1.06644125267617,2.78684006232526,1.03093969057675,0.605050573870028,0.667134131534611,0.190225626112559,0,0,0.502670417600539,0.994782360205754,0.58489226135736,0,0.648414149624083,0.199141273254367,0,0.456994050438915,1.1270773567308,1.4255592949172,0,0.98190147846446,1.01178459398812,1.03327103585722,0.627994911365499,1.1105744752962,0.592905254174298,0.500535317148282,0.196558995113203,0.674586337154561,0.608580364165509,0.241177159752417,0.25462585178142,0.863088412352432,0.324270453550071,0.274561413188081,1.43768206527355,0.744281895337007,0.312037673114561,1.26289438973556,0.538192240565737,0,1.10851914099963,0.947457058852424,0.977789858652155,0.678980343100753,1.17345124144251,1.00503754465089,0.476087281772027,0.975668239288994,0.945810864637146,0.221464689648775,0.797273843287435,0.983179888294428,1.03610989119537,0.723245292907558,3.01582567878545,1.63171705145613,0.491764273019036,0.275936746304732,2.24770825982909,1.40654023910644,0.163934945376675,0.757412781613119,0.631016438832513,0.780877488593277,0,1.19484398976276,1.11399337041197,1.13230612315533,0.809621403349789,0.584511715822624,0,0.642642632843614,1.84522110770749,0.712262414669021,0.977321756121456,0.824850614862677,0,0.728341908464944,0.302323556964751,0.754420319023592,0.590603785761546,0.614870295887855,1.29214146584111,0.727067458955011,0.712994756769443,0.632073515871632,0,1.03135543248187,1.36175842301515,1.44048875225048,0.776152102696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| ||
|EntrezGene=75627 | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|UniProt=Q8K0S9 | |||
|association_with_transcript=14bp_to_ENSMUST00000021532,NM_178392,uc007nwt.1_5end | |||
|description=CAGE_peak_2_at_Snapc1_5end | |||
|id=chr12:75065531..75065550,+ | |||
|ontology_enrichment_celltype=CL:0000838!5.05e-07!12;CL:0000791!6.11e-07!9;CL:0000789!6.11e-07!9;CL:0002420!6.11e-07!9;CL:0002419!6.11e-07!9;CL:0000790!6.11e-07!9;CL:0000542!6.93e-07!13;CL:0000051!6.93e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.57e-08,12;CL:0000791,2.61e-08,9;CL:0000789,2.61e-08,9;CL:0002420,2.61e-08,9;CL:0002419,2.61e-08,9;CL:0000790,2.61e-08,9;CL:0000542,3.78e-08,13;CL:0000051,3.78e-08,13;CL:0000084,1.54e-07,11;CL:0000827,1.54e-07,11;CL:0000624,1.84e-07,8;CL:0000738,1.92e-07,17;CL:0002087,1.92e-07,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=1.12104192973356,1.04692622291808,1.81999695755814,3.0246421130683,1.00179145989269,0.839396359559449,0.700837921786577,4.00282302668886,14.6420271037733,14.7460651582856,1.88339765048055,2.6324812468461,3.93761678841773,3.2345548895029,0.333109761815663,0,0,0.630924330716475,1.23402990245165,1.27316895539409,0.595303031057488,0.595745707205312,1.82839852397255,0.47997726838022,1.14704640533585,0.57423196411502,1.7230479846363,0.861884930743556,0.190023419456374,0.252030129759931,0.443461021310609,0.635030673459631,0.61506478758457,0,0.866554859253824,0.664938581433969,1.22501613757421,2.51118978442145,1.5626706890476,2.09409497589519,4.1176204162171,3.41522742479223,3.39857247121808,2.14024590558481,1.72340783073175,2.20256102594018,0,0,0,0.388859798148567,0,0,4.02678254538567,4.35217285206807,5.71359458542189,0.771778308107841,0,0,0,0,0,0,0,0.449949858640699,0,0.7104801149461,0,0.384218305321555,0.311068836925433,0.270011876663381,0.630974884054146,1.42825492201902,0,0.489963196859816,0.191690942036473,0,0,0.893811366596314,0.307213066512487,0.791317726381163,0.548925861614458,1.56274011167028,0.558365998002762,0.56276261003168,1.5279824777681,0,0.427115042397309,0.745597783301202,0.37863096666592,0.226714680320357,3.18850937571846,0.860423876981386,0,0,1.29955283489534,0.896053774194671,1.26399978118577,1.02258193546835,1.03914401841148,0.35333957451034,0.563373679106722,0,0,0,1.08245520505607,1.52015919285059,1.01104889002957,0.68510327831436,1.03575153458869,0.148442139064825,1.73485326766136,0.608930956624282,2.53677046981664,3.3158980921577,1.17588707135705,0.628332956648377,2.47194967734374,0.433798070759735,0.884610551949874,0.485300549842228,0.441683036920787,0.969750506270444,0,0.878342391034642,0.628340120440365,0.510914110417183,2.87556298814209,0.599902730993408,2.28726408731516,1.9472783122627,0.915001205637253,2.38743269014442,2.25971616249959,1.53429274398198,0.83115217823824,1.1356888414743,0.407357455401265,0.497627882440372,0.758168275301024,0.631325567659422,1.43132487258974,2.29902104433473,1.80062129805349,2.10986744970001,1.29269348387523,1.92170580427275,0.937017245597288,1.55222022443409,0.215567992932842,1.32374256117473,1.58356011747554,0.219195732427575,1.11218899690239,0.696504333044333,1.23469281844766,1.79130840136644,5.61770549850588,4.88961023517959,3.12579849335152,1.44988040774851,1.87620847984877,1.08037236876609,1.42046841351126,0.787056926989615,1.07986979021165,0.697601834251224,1.07309360559848,0.350296027101508,0.493679549740441,0.985004784474571,0.891756905004413,1.16959989940266,0.658650345873152,0.805238512562231,1.89260953707715,1.13195073617213,0.991256348951394,0,1.06644125267617,2.78684006232526,1.03093969057675,0.605050573870028,0.667134131534611,0.190225626112559,0,0,0.502670417600539,0.994782360205754,0.58489226135736,0,0.648414149624083,0.199141273254367,0,0.456994050438915,1.1270773567308,1.4255592949172,0,0.98190147846446,1.01178459398812,1.03327103585722,0.627994911365499,1.1105744752962,0.592905254174298,0.500535317148282,0.196558995113203,0.674586337154561,0.608580364165509,0.241177159752417,0.25462585178142,0.863088412352432,0.324270453550071,0.274561413188081,1.43768206527355,0.744281895337007,0.312037673114561,1.26289438973556,0.538192240565737,0,1.10851914099963,0.947457058852424,0.977789858652155,0.678980343100753,1.17345124144251,1.00503754465089,0.476087281772027,0.975668239288994,0.945810864637146,0.221464689648775,0.797273843287435,0.983179888294428,1.03610989119537,0.723245292907558,3.01582567878545,1.63171705145613,0.491764273019036,0.275936746304732,2.24770825982909,1.40654023910644,0.163934945376675,0.757412781613119,0.631016438832513,0.780877488593277,0,1.19484398976276,1.11399337041197,1.13230612315533,0.809621403349789,0.584511715822624,0,0.642642632843614,1.84522110770749,0.712262414669021,0.977321756121456,0.824850614862677,0,0.728341908464944,0.302323556964751,0.754420319023592,0.590603785761546,0.614870295887855,1.29214146584111,0.727067458955011,0.712994756769443,0.632073515871632,0,1.03135543248187,1.36175842301515,1.44048875225048,0.776152102696527,1.07168517515796,0.709360934569094,1.24858172321449,2.79733335023606,1.2178597964584,1.17335854031855,2.54198485036584,0,0.32977250588296,0.161464426695906,0.844380948994182,0.596861720015682,0.328281799490123,0,2.22510362412612,1.19609616558497,0.82554747185289,1.29636169158798,0.376736914009382,0.820165366326151,0.228778173206523,5.77926661979108,4.89830083132803,4.83699908315483,0.954670618015114,0.632671987162271,1.62655573701479,0.756037385752609,1.46361807210128,0.655087691238533,0.539457385539283,0.578574190077352,1.30877970992015,0.388844919875379,0.621339313086926,1.12738587736838,1.94371509857172,1.32366792365678,0.972255941720238,0.904118764344118,2.02747350588934,0.704143431874524,2.3436789271911,3.14578033277133,0.966336483304024,0,0.316011120628178,0.405450430580328,0.718976700153791,1.29920822977795,0.716106782669926,1.58945083825012,1.56254084375959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| |||
|short_description=p2@Snapc1 | |||
}} | |||
Revision as of 23:11, 12 September 2013
| Short description: | p2@Snapc1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Snapc1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:7 |
| Association with transcript: | 14bp_to_ENSMUST00000021532, NM_178392, uc007nwt.1_5end |
| EntrezGene: | Snapc1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| lymphoid lineage restricted progenitor cell | 2.57e-08 | 12 |
| mature alpha-beta T cell | 2.61e-08 | 9 |
| alpha-beta T cell | 2.61e-08 | 9 |
| immature T cell | 2.61e-08 | 9 |
| mature T cell | 2.61e-08 | 9 |
| immature alpha-beta T cell | 2.61e-08 | 9 |
| lymphocyte | 3.78e-08 | 13 |
| common lymphoid progenitor | 3.78e-08 | 13 |
| T cell | 1.54e-07 | 11 |
| pro-T cell | 1.54e-07 | 11 |
| CD4-positive, alpha-beta T cell | 1.84e-07 | 8 |
| leukocyte | 1.92e-07 | 17 |
| nongranular leukocyte | 1.92e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
