FFCP PHASE1:Mm9::chr12:85029073..85029199,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=19164|HGNC=|MCL_coexpression_id=2801|UniProt=F8WHB3,P49769,Q3UYK2|association_with_transcript=0bp_to_ENSMUST00000041806,uc007odo.1,uc007odp.1_5end|description=CAGE_peak_1_at_Psen1_5end|id=chr12:85029073..85029199,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!3.84e-11!43;UBERON:0005409!3.22e-08!59|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.30e-11,31;UBERON:0005409,1.86e-07,47|phase1_expression=41.6387002472464,108.880327183481,114.659808326163,127.034968748869,104.687207558787,66.1444331332846,67.2804404915114,45.3222865279933,51.951038473965,48.2172924223307,30.8192342805909,26.4843567864517,46.2241970814255,49.3051069643145,27.3150004688843,29.7638643063044,40.5745889314325,44.0069720674742,40.7229867809044,41.1657962244089,105.793852947931,40.3121261875594,32.1275740640891,115.354536834046,112.869366285048,87.8574905095981,90.4600191934057,94.1609286837335,170.451007252367,122.990703322846,84.2575940490158,24.7661962649256,20.2971379902908,15.8481681015439,45.0608526811988,46.7119353457364,38.179669621063,154.856703372656,99.2295887545227,158.627694424061,156.46957581625,153.002188630692,149.537188733595,35.8805931230395,39.9425109004887,41.48156598854,49.2906546939265,42.950955806948,52.7246838562732,54.0515119426508,44.5156820768653,47.4383462404406,50.8381296354941,60.2050577869416,55.791570657649,70.2318260378135,63.610423666404,64.4590115346803,70.0014954574208,76.7036919944448,59.5801519295808,50.1489907462315,50.6898033783349,64.34282978562,62.2985808417194,74.6004120693405,47.0372173513895,38.0376122268339,47.9046008865167,51.5722684427058,53.2122152218996,64.5571224752596,60.7388487616937,51.5686264694956,59.999264857416,56.0723459832113,55.0579404996944,56.3101160955678,54.9911389057352,71.2185953743047,74.7454048231687,71.3651317662761,60.5827107832997,44.4582461925027,53.937781465214,52.7385167997865,59.6537342548241,62.8166132431263,60.2023236998813,59.2481031237199,58.8424912064406,36.9982267101996,59.1575060325743,36.6998170313716,50.0327841434705,53.3151995645829,47.7511028447956,48.2317812895903,33.2526085891672,42.4007489412408,41.9713390934508,46.1975318691544,81.5376767061266,49.7746692207332,27.9273442904466,29.8964641260616,21.7375511356357,58.0054108972825,60.8504026570854,40.673146103762,36.6054039476547,38.3626502673298,48.6598699210283,44.312456322471,46.0947731971963,41.2186419561336,107.529810964453,37.7404321560969,36.2690326299448,38.0152097376412,38.4264242121085,49.4572758197927,63.3731988141615,40.9893115816166,48.801082687535,108.82470551886,61.1057134980193,32.9946502046374,69.2532737548203,44.1882386244227,43.0050566649509,58.6805824367077,50.2352285355679,46.7959286914505,46.1289458922223,44.6163473436334,47.8645010096487,45.6573582139041,39.4247503156533,47.1389757185702,36.1734831436316,33.565707247287,44.4753460619213,45.9649694398931,46.6730384178109,48.4269862676732,46.0075467588269,41.6512426889815,38.5866707349788,33.6608822698718,40.4687585577082,38.3592531748256,46.4338906206748,59.8993726418126,74.0815691068596,41.3991274982466,32.3018066164088,42.2050567668133,67.9150763555466,37.2826390563903,34.24080475724,30.4304883869115,34.8014761310259,29.9081632256054,38.1039768831824,32.7872862098075,41.582377216941,40.7511044861422,39.8234836790623,39.2360239149038,38.5887533438273,40.6435965042424,36.0062189077323,34.2226367838948,42.2682796613896,62.9776227761221,175.782792547381,90.7065443655957,38.6051733468773,34.3710274353449,56.1862131364327,72.2027018151566,72.9399983811175,108.048155631934,110.090742278327,120.065537993804,105.560787696113,119.37388322469,112.104350093494,104.26305140389,107.420610787723,108.731135196884,36.4162369829917,36.7880210603327,43.9560169125014,37.0645416678472,42.8634996640453,48.3235799044295,51.4745412191454,55.5014156403304,59.8165153075638,46.7675251263624,37.9459362671551,29.1978935003165,30.6632032376597,20.4624522270217,28.4004169943904,27.0118418922707,25.2079593263606,26.7557407829254,42.6415646418343,31.3000011034413,25.8782771749238,43.5404908772149,35.5722947350599,38.391989447961,41.6201999370836,39.0779252304327,47.8510762531506,28.9921860008842,34.7115399821515,32.9305466403865,30.2750420292168,39.1964642413849,39.9913316688503,49.3688129080231,44.9260160702644,45.8431907572964,49.112068746506,49.4867210441529,47.8337399768531,47.3002421561543,93.4905960423488,100.622551506461,41.308198933599,45.5295631402809,59.0826171155074,56.4960329374419,35.5738831467386,33.3261623909772,38.8075109881996,35.5299257309941,37.9145180009726,37.0401636826456,45.4509295128084,47.273780641735,44.9339878859133,35.0707029493574,45.8533822417967,44.6636629826312,44.8530669258129,50.3925658378332,43.816592066112,43.8820527106944,50.4431525691859,35.6887535147823,44.1392393168537,49.0373207365335,56.6979634331084,54.1085860381312,62.0227903603731,52.7123907742383,49.5531355954763,55.9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| ||
|EntrezGene=19164 | |||
|HGNC= | |||
|MCL_coexpression_id=2801 | |||
|UniProt=F8WHB3,P49769,Q3UYK2 | |||
|association_with_transcript=0bp_to_ENSMUST00000041806,uc007odo.1,uc007odp.1_5end | |||
|description=CAGE_peak_1_at_Psen1_5end | |||
|id=chr12:85029073..85029199,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.84e-11!43;UBERON:0005409!3.22e-08!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.30e-11,31;UBERON:0005409,1.86e-07,47 | |||
|phase1_expression=41.6387002472464,108.880327183481,114.659808326163,127.034968748869,104.687207558787,66.1444331332846,67.2804404915114,45.3222865279933,51.951038473965,48.2172924223307,30.8192342805909,26.4843567864517,46.2241970814255,49.3051069643145,27.3150004688843,29.7638643063044,40.5745889314325,44.0069720674742,40.7229867809044,41.1657962244089,105.793852947931,40.3121261875594,32.1275740640891,115.354536834046,112.869366285048,87.8574905095981,90.4600191934057,94.1609286837335,170.451007252367,122.990703322846,84.2575940490158,24.7661962649256,20.2971379902908,15.8481681015439,45.0608526811988,46.7119353457364,38.179669621063,154.856703372656,99.2295887545227,158.627694424061,156.46957581625,153.002188630692,149.537188733595,35.8805931230395,39.9425109004887,41.48156598854,49.2906546939265,42.950955806948,52.7246838562732,54.0515119426508,44.5156820768653,47.4383462404406,50.8381296354941,60.2050577869416,55.791570657649,70.2318260378135,63.610423666404,64.4590115346803,70.0014954574208,76.7036919944448,59.5801519295808,50.1489907462315,50.6898033783349,64.34282978562,62.2985808417194,74.6004120693405,47.0372173513895,38.0376122268339,47.9046008865167,51.5722684427058,53.2122152218996,64.5571224752596,60.7388487616937,51.5686264694956,59.999264857416,56.0723459832113,55.0579404996944,56.3101160955678,54.9911389057352,71.2185953743047,74.7454048231687,71.3651317662761,60.5827107832997,44.4582461925027,53.937781465214,52.7385167997865,59.6537342548241,62.8166132431263,60.2023236998813,59.2481031237199,58.8424912064406,36.9982267101996,59.1575060325743,36.6998170313716,50.0327841434705,53.3151995645829,47.7511028447956,48.2317812895903,33.2526085891672,42.4007489412408,41.9713390934508,46.1975318691544,81.5376767061266,49.7746692207332,27.9273442904466,29.8964641260616,21.7375511356357,58.0054108972825,60.8504026570854,40.673146103762,36.6054039476547,38.3626502673298,48.6598699210283,44.312456322471,46.0947731971963,41.2186419561336,107.529810964453,37.7404321560969,36.2690326299448,38.0152097376412,38.4264242121085,49.4572758197927,63.3731988141615,40.9893115816166,48.801082687535,108.82470551886,61.1057134980193,32.9946502046374,69.2532737548203,44.1882386244227,43.0050566649509,58.6805824367077,50.2352285355679,46.7959286914505,46.1289458922223,44.6163473436334,47.8645010096487,45.6573582139041,39.4247503156533,47.1389757185702,36.1734831436316,33.565707247287,44.4753460619213,45.9649694398931,46.6730384178109,48.4269862676732,46.0075467588269,41.6512426889815,38.5866707349788,33.6608822698718,40.4687585577082,38.3592531748256,46.4338906206748,59.8993726418126,74.0815691068596,41.3991274982466,32.3018066164088,42.2050567668133,67.9150763555466,37.2826390563903,34.24080475724,30.4304883869115,34.8014761310259,29.9081632256054,38.1039768831824,32.7872862098075,41.582377216941,40.7511044861422,39.8234836790623,39.2360239149038,38.5887533438273,40.6435965042424,36.0062189077323,34.2226367838948,42.2682796613896,62.9776227761221,175.782792547381,90.7065443655957,38.6051733468773,34.3710274353449,56.1862131364327,72.2027018151566,72.9399983811175,108.048155631934,110.090742278327,120.065537993804,105.560787696113,119.37388322469,112.104350093494,104.26305140389,107.420610787723,108.731135196884,36.4162369829917,36.7880210603327,43.9560169125014,37.0645416678472,42.8634996640453,48.3235799044295,51.4745412191454,55.5014156403304,59.8165153075638,46.7675251263624,37.9459362671551,29.1978935003165,30.6632032376597,20.4624522270217,28.4004169943904,27.0118418922707,25.2079593263606,26.7557407829254,42.6415646418343,31.3000011034413,25.8782771749238,43.5404908772149,35.5722947350599,38.391989447961,41.6201999370836,39.0779252304327,47.8510762531506,28.9921860008842,34.7115399821515,32.9305466403865,30.2750420292168,39.1964642413849,39.9913316688503,49.3688129080231,44.9260160702644,45.8431907572964,49.112068746506,49.4867210441529,47.8337399768531,47.3002421561543,93.4905960423488,100.622551506461,41.308198933599,45.5295631402809,59.0826171155074,56.4960329374419,35.5738831467386,33.3261623909772,38.8075109881996,35.5299257309941,37.9145180009726,37.0401636826456,45.4509295128084,47.273780641735,44.9339878859133,35.0707029493574,45.8533822417967,44.6636629826312,44.8530669258129,50.3925658378332,43.816592066112,43.8820527106944,50.4431525691859,35.6887535147823,44.1392393168537,49.0373207365335,56.6979634331084,54.1085860381312,62.0227903603731,52.7123907742383,49.5531355954763,55.9385061546394,55.8718625447493,58.7872596514665,68.0879211507576,39.7935017809196,41.3947788104814,48.6545069521715,45.5764400460643,53.8673829158253,55.782117984119,57.2394104335447,70.4015124191131,92.5706149674894,49.6188895623664,61.6674586001135,70.075561186023,62.2429385258568,57.6568421535149,62.2094010033782,104.058658676857,55.4421653011424,35.5411432059534,42.3093079324606,42.5947412950337,32.9644799758209,31.9864492867199,35.003060500598,53.7131838780583,53.3215033353137,57.2147891550315,50.597542754801,34.48062330034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| |||
|short_description=p1@Psen1 | |||
}} | |||
Revision as of 23:26, 12 September 2013
| Short description: | p1@Psen1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Psen1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:2801 |
| Association with transcript: | 0bp_to_ENSMUST00000041806, uc007odo.1, uc007odp.1_5end |
| EntrezGene: | Psen1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| intestine | 4.30e-11 | 31 |
| gastrointestinal system | 1.86e-07 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
