FFCP PHASE1:Hg19::chr3:29966392..29966406,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=27303|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13427|TSSclassifier=N|UniProt=|association_with_transcript=150bp_to_ENST00000473799_5end|coexpression_cluster_id=C230|description=CAGE_peak_22_at_RBMS3_5end|id=chr3:29966392..29966406,+|ontology_enrichment_celltype=CL:0002617!9.40e-09!2|ontology_enrichment_celltype_v019=CL:0000135;3.33e-27;3!CL:0000388;3.33e-27;3!CL:0000214;7.50e-08;3!CL:0002621;7.50e-08;3!CL:0000499;5.82e-07;28|ontology_enrichment_celltype_v019_2=CL:0000135,3.11e-27,3;CL:0000388,3.11e-27,3;CL:0002621,7.26e-08,3;CL:0000214,7.76e-08,3;CL:0000499,5.82e-07,28|ontology_enrichment_development_v019=UBERON:0005062;1.97e-45;4!UBERON:0007284;1.97e-45;4!UBERON:0006965;1.82e-11;2!UBERON:0003104;1.34e-10;31|ontology_enrichment_disease=DOID:114!8.69e-09!2|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003978!1.07e-13!3;UBERON:0009751!1.07e-13!3;UBERON:0000946!1.07e-13!3;UBERON:0002523!1.07e-13!3;UBERON:0005983!1.07e-13!3;UBERON:0002165!1.07e-13!3;UBERON:0002062!1.07e-13!3;UBERON:0007280!1.07e-13!3;UBERON:0007023!4.39e-11!115;UBERON:0002133!1.10e-09!2;UBERON:0002081!1.89e-09!2;UBERON:0000341!1.34e-08!2;UBERON:0007100!1.81e-08!27|ontology_enrichment_uberon_v019=UBERON:0003978;2.98e-60;3!UBERON:0000946;2.98e-60;3!UBERON:0002133;1.10e-40;2!UBERON:0007846;3.33e-27;3!UBERON:0000043;3.33e-27;3!UBERON:0007845;3.33e-27;3!UBERON:0002146;1.88e-21;1!UBERON:0005623;1.88e-21;1!UBERON:0002135;2.30e-21;1!UBERON:0002134;3.45e-21;1!UBERON:0005208;3.45e-21;1!UBERON:0004145;3.45e-21;1!UBERON:0005946;3.45e-21;1!UBERON:0005965;3.45e-21;1!UBERON:0002078;3.45e-21;1!UBERON:0010313;1.13e-18;10!UBERON:0002081;2.73e-11;2!UBERON:0000948;7.61e-09;22!UBERON:0004151;5.93e-08;3!UBERON:0007100;7.48e-08;25!UBERON:0006915;7.50e-08;3!UBERON:0007616;7.50e-08;3!UBERON:0002217;7.50e-08;3!UBERON:0002018;7.50e-08;3!UBERON:0001949;7.50e-08;3!UBERON:0000486;1.73e-07;12|ontology_enrichment_uberon_v019_2=UBERON:0003978,2.43e-60,3;UBERON:0009751,2.43e-60,3;UBERON:0000946,2.43e-60,3;UBERON:0002523,2.43e-60,3;UBERON:0005983,2.43e-60,3;UBERON:0002165,2.43e-60,3;UBERON:0002062,2.43e-60,3;UBERON:0007280,2.43e-60,3;UBERON:0002133,8.98e-41,2;UBERON:0007846,3.11e-27,3;UBERON:0000043,3.11e-27,3;UBERON:0007845,3.11e-27,3;UBERON:0004797,2.25e-26,7;UBERON:0002146,1.88e-21,1;UBERON:0005623,1.88e-21,1;UBERON:0002135,2.30e-21,1;UBERON:0002134,2.82e-21,1;UBERON:0005208,2.82e-21,1;UBERON:0005946,2.82e-21,1;UBERON:0005965,2.82e-21,1;UBERON:0002078,2.82e-21,1;UBERON:0010313,1.07e-18,10;UBERON:0002342,1.07e-18,10;UBERON:0005062,1.07e-18,10;UBERON:0002081,2.47e-11,2;UBERON:0010227,2.47e-11,2;UBERON:0000948,3.63e-08,24;UBERON:0005498,3.63e-08,24;UBERON:0004140,3.63e-08,24;UBERON:0009881,3.63e-08,24;UBERON:0004141,3.63e-08,24;UBERON:0003084,3.63e-08,24;UBERON:0007005,3.63e-08,24;UBERON:0004139,3.63e-08,24;UBERON:0004291,3.63e-08,24;UBERON:0004151,5.54e-08,3;UBERON:0004145,5.54e-08,3;UBERON:0001949,7.26e-08,3;UBERON:0006915,7.76e-08,3;UBERON:0007616,7.76e-08,3;UBERON:0002217,7.76e-08,3;UBERON:0002018,7.76e-08,3;UBERON:0004923,1.21e-07,66;UBERON:0007100,2.54e-07,27|phase1_expression=0.363356758541113,0.214100523890983,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09098448236334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460385919864187,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0.876901770507525,0,0,0,0.30982349809975,0,0,0,0,0,1.05553817648832,0.987884678879706,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0,0,0,0,0,0,0,0,10.9586393538088,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.42349522926185,7.56229399238556,2.87149209830726,0.199679000498991,0.429226048136571,0.89268582976749,0.335917362433631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=27303 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13427 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=150bp_to_ENST00000473799_5end | |||
|coexpression_cluster_id=C230 | |||
|description=CAGE_peak_22_at_RBMS3_5end | |||
|id=chr3:29966392..29966406,+ | |||
|ontology_enrichment_celltype=CL:0002617!9.40e-09!2 | |||
|ontology_enrichment_celltype_v019=CL:0000135;3.33e-27;3!CL:0000388;3.33e-27;3!CL:0000214;7.50e-08;3!CL:0002621;7.50e-08;3!CL:0000499;5.82e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,3.11e-27,3;CL:0000388,3.11e-27,3;CL:0002621,7.26e-08,3;CL:0000214,7.76e-08,3;CL:0000499,5.82e-07,28 | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.97e-45;4!UBERON:0007284;1.97e-45;4!UBERON:0006965;1.82e-11;2!UBERON:0003104;1.34e-10;31 | |||
|ontology_enrichment_disease=DOID:114!8.69e-09!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003978!1.07e-13!3;UBERON:0009751!1.07e-13!3;UBERON:0000946!1.07e-13!3;UBERON:0002523!1.07e-13!3;UBERON:0005983!1.07e-13!3;UBERON:0002165!1.07e-13!3;UBERON:0002062!1.07e-13!3;UBERON:0007280!1.07e-13!3;UBERON:0007023!4.39e-11!115;UBERON:0002133!1.10e-09!2;UBERON:0002081!1.89e-09!2;UBERON:0000341!1.34e-08!2;UBERON:0007100!1.81e-08!27 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0003978,2.43e-60,3;UBERON:0009751,2.43e-60,3;UBERON:0000946,2.43e-60,3;UBERON:0002523,2.43e-60,3;UBERON:0005983,2.43e-60,3;UBERON:0002165,2.43e-60,3;UBERON:0002062,2.43e-60,3;UBERON:0007280,2.43e-60,3;UBERON:0002133,8.98e-41,2;UBERON:0007846,3.11e-27,3;UBERON:0000043,3.11e-27,3;UBERON:0007845,3.11e-27,3;UBERON:0004797,2.25e-26,7;UBERON:0002146,1.88e-21,1;UBERON:0005623,1.88e-21,1;UBERON:0002135,2.30e-21,1;UBERON:0002134,2.82e-21,1;UBERON:0005208,2.82e-21,1;UBERON:0005946,2.82e-21,1;UBERON:0005965,2.82e-21,1;UBERON:0002078,2.82e-21,1;UBERON:0010313,1.07e-18,10;UBERON:0002342,1.07e-18,10;UBERON:0005062,1.07e-18,10;UBERON:0002081,2.47e-11,2;UBERON:0010227,2.47e-11,2;UBERON:0000948,3.63e-08,24;UBERON:0005498,3.63e-08,24;UBERON:0004140,3.63e-08,24;UBERON:0009881,3.63e-08,24;UBERON:0004141,3.63e-08,24;UBERON:0003084,3.63e-08,24;UBERON:0007005,3.63e-08,24;UBERON:0004139,3.63e-08,24;UBERON:0004291,3.63e-08,24;UBERON:0004151,5.54e-08,3;UBERON:0004145,5.54e-08,3;UBERON:0001949,7.26e-08,3;UBERON:0006915,7.76e-08,3;UBERON:0007616,7.76e-08,3;UBERON:0002217,7.76e-08,3;UBERON:0002018,7.76e-08,3;UBERON:0004923,1.21e-07,66;UBERON:0007100,2.54e-07,27 | |||
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|short_description=p22@RBMS3 | |||
}} |
Revision as of 23:48, 12 September 2013
Short description: | p22@RBMS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_22_at_RBMS3_5end |
Coexpression cluster: | C230_aorta_normal_heart_penis_osteosarcoma_basal_lung |
Association with transcript: | 150bp_to_ENST00000473799_5end |
EntrezGene: | RBMS3 |
HGNC: | 13427 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 3.11e-27 | 3 |
tendon cell | 3.11e-27 | 3 |
gingival epithelial cell | 7.26e-08 | 3 |
synovial cell | 7.76e-08 | 3 |
stromal cell | 5.82e-07 | 28 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.