FFCP PHASE1:Mm9::chr13:23663020..23663039,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=319164,319165,319166,319167,319168,319170,319171,319172,319191,665433|HGNC=|MCL_coexpression_id=154|UniProt=P22752,B2RVF0|association_with_transcript=49bp_to_ENSMUST00000102969,NM_178187,uc007pud.1_5end|description=CAGE_peak_2_at_Hist1h2ab_5end,CAGE_peak_2_at_Hist1h2ac_5end,CAGE_peak_2_at_Hist1h2ad_5end,CAGE_peak_2_at_Hist1h2ae_5end,CAGE_peak_2_at_Hist1h2ag_5end,CAGE_peak_2_at_Hist1h2ah_5end,CAGE_peak_2_at_Hist1h2ai_5end,CAGE_peak_2_at_Hist1h2an_5end,CAGE_peak_2_at_Hist1h2ao_5end,CAGE_peak_2_at_Hist1h2ap_5end|id=chr13:23663020..23663039,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=266.487681582377,130.167827049482,71.4348805841572,29.3390284967625,75.1343594919521,322.49608134274,295.286377712744,51.2619594063058,7.46180227403834,6.78787126333781,3.76679530096111,3.11111420081812,28.7617226284426,25.3519167015092,4617.2344085269,6957.65761331659,9495.85293371146,348.112499472815,317.968371531708,937.476740821849,134.028225278086,1808.48538517292,1957.43121980718,438.859215722315,521.676705146745,236.583569215388,314.025495199966,313.726114790654,517.623794599162,681.993531130373,1029.05129995127,10993.6510189331,15794.8637451718,10333.0056022066,1198.73422196779,1886.09828623745,1285.04192831535,2425.39080012038,4830.99643519066,2186.23515483458,1533.51948929685,2637.23861742456,1519.16189463448,65.214551711349,55.4531813770745,93.9759371067809,546.891549699279,701.604953232277,114.45650120466,58.1345398232107,362.984791274565,572.135206172587,195.970083875436,104.452148449634,89.4009505718954,254.172322803516,115.18644285538,30.4246534443691,293.965817628996,269.256408449465,365.086888419559,424.911043214692,749.675513121691,147.133603775509,239.305659741208,187.56675034577,604.593023026141,647.792062772141,832.731276449384,639.928147692214,1190.22895628747,169.105382767052,234.562390490614,1650.07355622465,1323.05088193573,643.453150627015,23.1243350098716,9.95961237064464,10.2916377281683,235.944568749317,120.855177198783,267.228559095618,6.70039197603314,14.6318278608237,20.6277634498694,331.75178724335,158.317309048602,156.948333384903,55.2801211332244,342.943739764593,51.8857434776003,26.673140186423,10.1995700056163,8.63525106620507,10.3964226791627,6.2723764193627,484.954582714939,891.861878050976,806.115972282702,859.321845209147,285.207925047778,114.210564898743,17.8363667794652,7.11066703153331,1110.38254934652,838.621154722576,828.55456537923,280.663976349449,193.685536968084,43.196662467864,1680.37887505679,1141.44107819222,929.841684936428,469.199580040314,381.457765948226,200.689546353492,26.2026665798436,45.4041980728523,3325.25106477958,1028.35186511568,2483.58371660559,3168.65977923868,726.927868750676,7.02673912827713,9.00620839297857,472.340095080685,7497.91067645598,10317.7270703556,5268.96696558463,11.6836698735762,37.5150494311274,375.706512817465,18.5992022605736,18.6672283851141,14.7529511637288,29.3656686152641,766.544891701331,1683.22631235456,44.7319282427604,39.9839526184301,1949.98495823908,2441.10054487462,2868.92991418863,1617.66551464857,1484.28426548537,1845.47814070326,1555.16752251782,50.7058606648471,3336.9925306004,2408.83324917768,1958.68791419308,2026.46454629293,1326.2853788061,1007.49351774863,797.405778580781,1354.62721996666,5312.24276202462,7365.55444953026,4010.1153034706,1248.13990529893,1127.83582244909,958.290291095521,964.024563302976,788.631040843595,801.41765144993,633.654999444861,564.715509946198,377.502351873059,438.058320469685,261.682937742078,88.202864785891,46.637795988681,168.175388312945,139.977294767068,29.6508827475419,314.373590818714,41.9631854389423,898.074124389396,2164.02258993048,1702.52704140887,1573.7294376654,1122.57049805352,1065.63558610462,800.469434681649,544.284833591555,316.716089934273,412.189742432442,484.657965892243,375.500831791425,570.750324495431,473.126191175706,327.786535776688,3821.99787210555,1733.03568777698,1851.78809710871,1210.70714404039,1010.88036311767,529.805983451466,402.247612647401,45.4639255777175,97.8102074451765,66.7578656816941,22.8268522857105,3702.62658605156,3221.01225292006,3743.95417120781,4994.21332846355,3841.952154856,3547.44736701874,3085.82877029739,1758.84294005558,1795.90620366324,3542.44860883402,727.907693639593,335.440498598153,199.789892456165,210.253768647681,41.9725863586129,196.023134766768,2201.32173053772,2355.82169944593,2216.53133005241,1979.8469345618,1006.21008845299,720.082013680192,136.788687148317,620.76719749018,587.102892258902,334.217195106093,70.7889519571988,158.870183316624,195.420878143622,31.6661696272472,64.7247763744264,301.943263633688,195.363216383751,7.38532713943843,12.3072270921813,1150.65938159888,166.125870100477,902.037999311078,779.706172360387,451.096594852481,427.03724194121,384.996108814377,340.824143069754,299.559919239422,224.160243017976,150.604643397625,30.2042037436499,256.769614141758,1303.79635005164,767.197578555343,201.428520149466,25.2215762845929,2776.68213570452,1632.84953116662,1063.166834584,995.757982793966,585.971391981126,334.14778306651,655.451314247942,622.087925281339,225.650245166173,122.285585946999,158.828736602208,51.406380468822,1619.28941862357,1681.01609575689,1034.81920513253,712.375718541013,681.903989692716,490.849728456127,894.213555549578,556.641291527121,55.2881704954571,24.9197089802107,181.209991982687,386.707301936694,941.364132278657,923.70319789627,750.944616333655,389.418397737481,25.5886916774503,4456.4834420888,1761.71830493407,2659.02302397432,7117.87888483626,4904.58889063038,5033.1198105435,2494.43346015983,3358.41500141082,2982.63183464707,15.2747298882418,2299.28816934448,1572.06611982479,1129.08783295111,945.079097985399,744.834704938212,742.563091194823,459.966481111494,202.337343153655,315.742074938807,54.6778595516495,15.7834022831573,1268.19934354503,1620.1695385559,1251.87675055898,1389.63054079691,1247.7409867494,1072.99723293813,728.753941971589,184.133008811548,46.8673194402452,25.9227005632079,2591.60720027169,2305.99932392562,2132.79302552764,2590.88105182319,3632.4516550932,3062.6730839532,2637.32855336716,2890.727115388,2711.8578791573,3021.21884983747,3284.11050227717,3183.65659012549,2523.5403943842,1495.20620960881,98.4009864890017,944.328245653271,1149.68307245043,561.07038788875,43.8540378453072,172.292512464185,171.979375186962,282.751892005288,30.0943262421218,47.4391547798336,43.7308974681818,53.8521782633033,45.1973869563898,21.9226406326606,18.1294535373528,24.300810008345,16.2115633160719,18.5788387683524,16.5683299760582,1802.78622753715,1721.79232872545,1495.96785361772,2005.63041581343,1145.95516008718,821.780482771563,635.181148057016,727.509787110536,577.333658055676,660.80320876233,683.633671803977,693.579057276602,654.647778721948,650.623598738282,681.816451972085,632.994315715205,486.250631664614,536.2876328891,482.140503939869,598.51080926646,644.594194484581,625.424740905505,578.446196812201,677.89568717318,624.886285957795,605.67136328862,599.637895076948,485.889757025696,528.006394632711,556.091991212819,538.247077229378,564.824701941481,451.381840616167,601.154943801548,860.170578364909,1024.97280127939,747.879352199971,643.323935820605,360.195929285632,935.748799904985,1255.7961977202|short_description=p2@Hist1h2ab,p2@Hist1h2ac,p2@Hist1h2ad,p2@Hist1h2ae,p2@Hist1h2ag,p2@Hist1h2ah,p2@Hist1h2ai,p2@Hist1h2an,p2@Hist1h2ao,p2@Hist1h2ap}} | ||
|EntrezGene=319164,319165,319166,319167,319168,319170,319171,319172,319191,665433 | |||
|HGNC= | |||
|MCL_coexpression_id=154 | |||
|UniProt=P22752,B2RVF0 | |||
|association_with_transcript=49bp_to_ENSMUST00000102969,NM_178187,uc007pud.1_5end | |||
|description=CAGE_peak_2_at_Hist1h2ab_5end,CAGE_peak_2_at_Hist1h2ac_5end,CAGE_peak_2_at_Hist1h2ad_5end,CAGE_peak_2_at_Hist1h2ae_5end,CAGE_peak_2_at_Hist1h2ag_5end,CAGE_peak_2_at_Hist1h2ah_5end,CAGE_peak_2_at_Hist1h2ai_5end,CAGE_peak_2_at_Hist1h2an_5end,CAGE_peak_2_at_Hist1h2ao_5end,CAGE_peak_2_at_Hist1h2ap_5end | |||
|id=chr13:23663020..23663039,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=266.487681582377,130.167827049482,71.4348805841572,29.3390284967625,75.1343594919521,322.49608134274,295.286377712744,51.2619594063058,7.46180227403834,6.78787126333781,3.76679530096111,3.11111420081812,28.7617226284426,25.3519167015092,4617.2344085269,6957.65761331659,9495.85293371146,348.112499472815,317.968371531708,937.476740821849,134.028225278086,1808.48538517292,1957.43121980718,438.859215722315,521.676705146745,236.583569215388,314.025495199966,313.726114790654,517.623794599162,681.993531130373,1029.05129995127,10993.6510189331,15794.8637451718,10333.0056022066,1198.73422196779,1886.09828623745,1285.04192831535,2425.39080012038,4830.99643519066,2186.23515483458,1533.51948929685,2637.23861742456,1519.16189463448,65.214551711349,55.4531813770745,93.9759371067809,546.891549699279,701.604953232277,114.45650120466,58.1345398232107,362.984791274565,572.135206172587,195.970083875436,104.452148449634,89.4009505718954,254.172322803516,115.18644285538,30.4246534443691,293.965817628996,269.256408449465,365.086888419559,424.911043214692,749.675513121691,147.133603775509,239.305659741208,187.56675034577,604.593023026141,647.792062772141,832.731276449384,639.928147692214,1190.22895628747,169.105382767052,234.562390490614,1650.07355622465,1323.05088193573,643.453150627015,23.1243350098716,9.95961237064464,10.2916377281683,235.944568749317,120.855177198783,267.228559095618,6.70039197603314,14.6318278608237,20.6277634498694,331.75178724335,158.317309048602,156.948333384903,55.2801211332244,342.943739764593,51.8857434776003,26.673140186423,10.1995700056163,8.63525106620507,10.3964226791627,6.2723764193627,484.954582714939,891.861878050976,806.115972282702,859.321845209147,285.207925047778,114.210564898743,17.8363667794652,7.11066703153331,1110.38254934652,838.621154722576,828.55456537923,280.663976349449,193.685536968084,43.196662467864,1680.37887505679,1141.44107819222,929.841684936428,469.199580040314,381.457765948226,200.689546353492,26.2026665798436,45.4041980728523,3325.25106477958,1028.35186511568,2483.58371660559,3168.65977923868,726.927868750676,7.02673912827713,9.00620839297857,472.340095080685,7497.91067645598,10317.7270703556,5268.96696558463,11.6836698735762,37.5150494311274,375.706512817465,18.5992022605736,18.6672283851141,14.7529511637288,29.3656686152641,766.544891701331,1683.22631235456,44.7319282427604,39.9839526184301,1949.98495823908,2441.10054487462,2868.92991418863,1617.66551464857,1484.28426548537,1845.47814070326,1555.16752251782,50.7058606648471,3336.9925306004,2408.83324917768,1958.68791419308,2026.46454629293,1326.2853788061,1007.49351774863,797.405778580781,1354.62721996666,5312.24276202462,7365.55444953026,4010.1153034706,1248.13990529893,1127.83582244909,958.290291095521,964.024563302976,788.631040843595,801.41765144993,633.654999444861,564.715509946198,377.502351873059,438.058320469685,261.682937742078,88.202864785891,46.637795988681,168.175388312945,139.977294767068,29.6508827475419,314.373590818714,41.9631854389423,898.074124389396,2164.02258993048,1702.52704140887,1573.7294376654,1122.57049805352,1065.63558610462,800.469434681649,544.284833591555,316.716089934273,412.189742432442,484.657965892243,375.500831791425,570.750324495431,473.126191175706,327.786535776688,3821.99787210555,1733.03568777698,1851.78809710871,1210.70714404039,1010.88036311767,529.805983451466,402.247612647401,45.4639255777175,97.8102074451765,66.7578656816941,22.8268522857105,3702.62658605156,3221.01225292006,3743.95417120781,4994.21332846355,3841.952154856,3547.44736701874,3085.82877029739,1758.84294005558,1795.90620366324,3542.44860883402,727.907693639593,335.440498598153,199.789892456165,210.253768647681,41.9725863586129,196.023134766768,2201.32173053772,2355.82169944593,2216.53133005241,1979.8469345618,1006.21008845299,720.082013680192,136.788687148317,620.76719749018,587.102892258902,334.217195106093,70.7889519571988,158.870183316624,195.420878143622,31.6661696272472,64.7247763744264,301.943263633688,195.363216383751,7.38532713943843,12.3072270921813,1150.65938159888,166.125870100477,902.037999311078,779.706172360387,451.096594852481,427.03724194121,384.996108814377,340.824143069754,299.559919239422,224.160243017976,150.604643397625,30.2042037436499,256.769614141758,1303.79635005164,767.197578555343,201.428520149466,25.2215762845929,2776.68213570452,1632.84953116662,1063.166834584,995.757982793966,585.971391981126,334.14778306651,655.451314247942,622.087925281339,225.650245166173,122.285585946999,158.828736602208,51.406380468822,1619.28941862357,1681.01609575689,1034.81920513253,712.375718541013,681.903989692716,490.849728456127,894.213555549578,556.641291527121,55.2881704954571,24.9197089802107,181.209991982687,386.707301936694,941.364132278657,923.70319789627,750.944616333655,389.418397737481,25.5886916774503,4456.4834420888,1761.71830493407,2659.02302397432,7117.87888483626,4904.58889063038,5033.1198105435,2494.43346015983,3358.41500141082,2982.63183464707,15.2747298882418,2299.28816934448,1572.06611982479,1129.08783295111,945.079097985399,744.834704938212,742.563091194823,459.966481111494,202.337343153655,315.742074938807,54.6778595516495,15.7834022831573,1268.19934354503,1620.1695385559,1251.87675055898,1389.63054079691,1247.7409867494,1072.99723293813,728.753941971589,184.133008811548,46.8673194402452,25.9227005632079,2591.60720027169,2305.99932392562,2132.79302552764,2590.88105182319,3632.4516550932,3062.6730839532,2637.32855336716,2890.727115388,2711.8578791573,3021.21884983747,3284.11050227717,3183.65659012549,2523.5403943842,1495.20620960881,98.4009864890017,944.328245653271,1149.68307245043,561.07038788875,43.8540378453072,172.292512464185,171.979375186962,282.751892005288,30.0943262421218,47.4391547798336,43.7308974681818,53.8521782633033,45.1973869563898,21.9226406326606,18.1294535373528,24.300810008345,16.2115633160719,18.5788387683524,16.5683299760582,1802.78622753715,1721.79232872545,1495.96785361772,2005.63041581343,1145.95516008718,821.780482771563,635.181148057016,727.509787110536,577.333658055676,660.80320876233,683.633671803977,693.579057276602,654.647778721948,650.623598738282,681.816451972085,632.994315715205,486.250631664614,536.2876328891,482.140503939869,598.51080926646,644.594194484581,625.424740905505,578.446196812201,677.89568717318,624.886285957795,605.67136328862,599.637895076948,485.889757025696,528.006394632711,556.091991212819,538.247077229378,564.824701941481,451.381840616167,601.154943801548,860.170578364909,1024.97280127939,747.879352199971,643.323935820605,360.195929285632,935.748799904985,1255.7961977202 | |||
|short_description=p2@Hist1h2ab,p2@Hist1h2ac,p2@Hist1h2ad,p2@Hist1h2ae,p2@Hist1h2ag,p2@Hist1h2ah,p2@Hist1h2ai,p2@Hist1h2an,p2@Hist1h2ao,p2@Hist1h2ap | |||
}} | |||
Revision as of 00:10, 13 September 2013
| Short description: | p2@Hist1h2ab, p2@Hist1h2ac, p2@Hist1h2ad, p2@Hist1h2ae, p2@Hist1h2ag, p2@Hist1h2ah, p2@Hist1h2ai, p2@Hist1h2an, p2@Hist1h2ao, p2@Hist1h2ap |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Hist1h2ab_5end, CAGE_peak_2_at_Hist1h2ac_5end, CAGE_peak_2_at_Hist1h2ad_5end, CAGE_peak_2_at_Hist1h2ae_5end, CAGE_peak_2_at_Hist1h2ag_5end, CAGE_peak_2_at_Hist1h2ah_5end, CAGE_peak_2_at_Hist1h2ai_5end, CAGE_peak_2_at_Hist1h2an_5end, CAGE_peak_2_at_Hist1h2ao_5end, CAGE_peak_2_at_Hist1h2ap_5end |
| Coexpression cluster: | MCL_coexpression_mm9:154 |
| Association with transcript: | 49bp_to_ENSMUST00000102969, NM_178187, uc007pud.1_5end |
| EntrezGene: | 319164,319165,319166,319167,319168,319170,319171,319172,319191,665433 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
