FFCP PHASE1:Mm9::chr13:25361789..25361894,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=22360|HGNC=|MCL_coexpression_id=1|UniProt=P97799|association_with_transcript=0bp_to_NM_009513,uc007pwx.2_5end|description=CAGE_peak_1_at_Nrsn1_5end|id=chr13:25361789..25361894,-|ontology_enrichment_celltype=CL:0000540!1.81e-14!33;CL:0000047!1.81e-14!33;CL:0000031!1.81e-14!33;CL:0000404!1.81e-14!33;CL:0000221!1.21e-13!44;CL:0000133!1.21e-13!44;CL:0002319!3.07e-13!43;CL:0000117!2.20e-12!23;CL:0000337!2.20e-12!23;CL:0000393!1.38e-09!39;CL:0000211!1.38e-09!39;CL:0000055!1.00e-08!50|ontology_enrichment_celltype_v019_2=CL:0000540,1.52e-16,33;CL:0000047,1.52e-16,33;CL:0000031,1.52e-16,33;CL:0000404,1.52e-16,33;CL:0000117,9.98e-15,23;CL:0000337,9.98e-15,23;CL:0000221,1.60e-14,44;CL:0000133,1.60e-14,44;CL:0002319,4.79e-14,43;CL:0000393,4.74e-12,39;CL:0000211,4.74e-12,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.73e-32!102;UBERON:0000924!1.73e-32!102;UBERON:0006601!1.73e-32!102;UBERON:0000073!3.70e-32!75;UBERON:0001016!3.70e-32!75;UBERON:0001017!8.14e-32!73;UBERON:0005743!8.14e-32!73;UBERON:0002346!8.57e-32!71;UBERON:0003075!8.57e-32!71;UBERON:0007284!8.57e-32!71;UBERON:0000033!1.77e-29!63;UBERON:0001049!9.12e-27!52;UBERON:0005068!9.12e-27!52;UBERON:0006241!9.12e-27!52;UBERON:0007135!9.12e-27!52;UBERON:0000955!4.80e-26!50;UBERON:0006238!4.80e-26!50;UBERON:0002616!2.84e-25!49;UBERON:0003056!1.20e-22!49;UBERON:0003080!2.91e-20!40;UBERON:0002780!1.39e-19!39;UBERON:0001890!1.39e-19!39;UBERON:0006240!1.39e-19!39;UBERON:0002020!2.81e-19!34;UBERON:0002791!1.91e-16!29;UBERON:0003528!1.91e-16!29;UBERON:0001893!1.91e-16!29;UBERON:0007811!7.09e-15!86;UBERON:0000153!6.21e-13!94;UBERON:0000956!1.09e-11!21;UBERON:0001869!1.09e-11!21;UBERON:0000203!1.09e-11!21;UBERON:0002619!1.39e-10!17;UBERON:0002021!1.84e-08!10;UBERON:0000411!1.84e-08!10;UBERON:0001950!1.84e-08!10;UBERON:0003076!5.24e-07!12;UBERON:0003057!5.24e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.42e-36,75;UBERON:0001017,3.79e-36,73;UBERON:0002346,4.13e-35,64;UBERON:0003075,4.13e-35,64;UBERON:0007284,4.13e-35,64;UBERON:0004121,1.63e-33,95;UBERON:0000924,1.63e-33,95;UBERON:0006601,1.63e-33,95;UBERON:0000073,2.11e-33,54;UBERON:0001049,1.91e-31,52;UBERON:0005068,1.91e-31,52;UBERON:0006241,1.91e-31,52;UBERON:0007135,1.91e-31,52;UBERON:0010371,2.89e-30,73;UBERON:0000955,7.40e-28,47;UBERON:0006238,7.40e-28,47;UBERON:0002616,6.08e-27,46;UBERON:0003056,1.53e-26,49;UBERON:0003080,2.55e-24,40;UBERON:0010314,9.92e-24,92;UBERON:0002780,1.71e-23,39;UBERON:0001890,1.71e-23,39;UBERON:0006240,1.71e-23,39;UBERON:0002020,4.03e-23,34;UBERON:0003528,1.13e-19,29;UBERON:0002791,1.13e-19,29;UBERON:0001893,1.13e-19,29;UBERON:0000956,6.99e-14,21;UBERON:0001869,6.99e-14,21;UBERON:0000203,6.99e-14,21;UBERON:0002619,1.54e-12,17;UBERON:0002021,5.89e-10,10;UBERON:0000411,5.89e-10,10;UBERON:0001950,5.89e-10,10;UBERON:0003076,1.83e-07,12;UBERON:0003057,1.83e-07,12;UBERON:0002420,5.40e-07,8;UBERON:0007245,5.40e-07,8;UBERON:0010009,5.40e-07,8;UBERON:0010011,5.40e-07,8;UBERON:0000454,5.40e-07,8|phase1_expression=11.5307169915452,0,0,0,0,0,0.467225281191051,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,36.0583550240536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.25913075478431,0.65407546914134,1.75748946187577,2.91644848611425,0.55994568650145,0,0,0.725362142011344,0,0,0,0,16.7922662513466,12.6957835025288,12.0427966666174,1.0165335962074,1.77858959222228,0,0,0,0,0.384218305321555,2.69592992002042,2.29510095163874,2.73422449756797,31.992910253226,32.6885440608388,5.87955836231779,6.3258010872036,2.75765635983006,188.298156508955,227.411149129719,171.424891113968,19.6510568717989,24.0612502674337,22.3992749339407,148.246172469733,195.841388291025,195.734555402094,26.8112012781038,20.3591503542717,14.1663578827228,1.81742863999642,2.04043212288321,0.289864488701678,0,0,0,0,0,7.02222100658759,0,0,0.35333957451034,4.22530259330042,0,0,0,0,0,0,4.90990682791958,0,1.92974780784272,2.25530924795977,3.34912026143355,2.53677046981664,3.61734337326294,1.76383060703557,0.879666139307728,0,0.144599356919912,0,0,0,0.484875253135222,0,26.0574909340277,27.8564120061895,0.255457055208591,0,0,0,156.830799456849,151.890200135784,18.7224984648168,224.581021688421,258.528327360964,158.957854088063,144.881447919508,0.305518091550949,0,0.252722758433675,6.94458124425364,0.520481771850815,1.60931473103431,1.80062129805349,2.26057226753573,3.94611695077702,4.61209393025459,5.62210347358373,14.2286853906459,0.215567992932842,0.567318240503458,0,0.219195732427575,0.278047249225598,0,0.411564272815887,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0.164167464079095,0.324275238183423,0,0,0,139.211945949452,12.9659811597898,0.330418782983798,0.793351699990633,0.213288250535234,1.39342003116263,1.28867461322093,1.61346819698674,0.667134131534611,2.28270751335071,0.474529061544512,1.97638745668813,2.01068167040216,2.78539060857611,0.974820435595601,0.898819408654221,0.6484141496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| ||
|EntrezGene=22360 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=P97799 | |||
|association_with_transcript=0bp_to_NM_009513,uc007pwx.2_5end | |||
|description=CAGE_peak_1_at_Nrsn1_5end | |||
|id=chr13:25361789..25361894,- | |||
|ontology_enrichment_celltype=CL:0000540!1.81e-14!33;CL:0000047!1.81e-14!33;CL:0000031!1.81e-14!33;CL:0000404!1.81e-14!33;CL:0000221!1.21e-13!44;CL:0000133!1.21e-13!44;CL:0002319!3.07e-13!43;CL:0000117!2.20e-12!23;CL:0000337!2.20e-12!23;CL:0000393!1.38e-09!39;CL:0000211!1.38e-09!39;CL:0000055!1.00e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.52e-16,33;CL:0000047,1.52e-16,33;CL:0000031,1.52e-16,33;CL:0000404,1.52e-16,33;CL:0000117,9.98e-15,23;CL:0000337,9.98e-15,23;CL:0000221,1.60e-14,44;CL:0000133,1.60e-14,44;CL:0002319,4.79e-14,43;CL:0000393,4.74e-12,39;CL:0000211,4.74e-12,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.73e-32!102;UBERON:0000924!1.73e-32!102;UBERON:0006601!1.73e-32!102;UBERON:0000073!3.70e-32!75;UBERON:0001016!3.70e-32!75;UBERON:0001017!8.14e-32!73;UBERON:0005743!8.14e-32!73;UBERON:0002346!8.57e-32!71;UBERON:0003075!8.57e-32!71;UBERON:0007284!8.57e-32!71;UBERON:0000033!1.77e-29!63;UBERON:0001049!9.12e-27!52;UBERON:0005068!9.12e-27!52;UBERON:0006241!9.12e-27!52;UBERON:0007135!9.12e-27!52;UBERON:0000955!4.80e-26!50;UBERON:0006238!4.80e-26!50;UBERON:0002616!2.84e-25!49;UBERON:0003056!1.20e-22!49;UBERON:0003080!2.91e-20!40;UBERON:0002780!1.39e-19!39;UBERON:0001890!1.39e-19!39;UBERON:0006240!1.39e-19!39;UBERON:0002020!2.81e-19!34;UBERON:0002791!1.91e-16!29;UBERON:0003528!1.91e-16!29;UBERON:0001893!1.91e-16!29;UBERON:0007811!7.09e-15!86;UBERON:0000153!6.21e-13!94;UBERON:0000956!1.09e-11!21;UBERON:0001869!1.09e-11!21;UBERON:0000203!1.09e-11!21;UBERON:0002619!1.39e-10!17;UBERON:0002021!1.84e-08!10;UBERON:0000411!1.84e-08!10;UBERON:0001950!1.84e-08!10;UBERON:0003076!5.24e-07!12;UBERON:0003057!5.24e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.42e-36,75;UBERON:0001017,3.79e-36,73;UBERON:0002346,4.13e-35,64;UBERON:0003075,4.13e-35,64;UBERON:0007284,4.13e-35,64;UBERON:0004121,1.63e-33,95;UBERON:0000924,1.63e-33,95;UBERON:0006601,1.63e-33,95;UBERON:0000073,2.11e-33,54;UBERON:0001049,1.91e-31,52;UBERON:0005068,1.91e-31,52;UBERON:0006241,1.91e-31,52;UBERON:0007135,1.91e-31,52;UBERON:0010371,2.89e-30,73;UBERON:0000955,7.40e-28,47;UBERON:0006238,7.40e-28,47;UBERON:0002616,6.08e-27,46;UBERON:0003056,1.53e-26,49;UBERON:0003080,2.55e-24,40;UBERON:0010314,9.92e-24,92;UBERON:0002780,1.71e-23,39;UBERON:0001890,1.71e-23,39;UBERON:0006240,1.71e-23,39;UBERON:0002020,4.03e-23,34;UBERON:0003528,1.13e-19,29;UBERON:0002791,1.13e-19,29;UBERON:0001893,1.13e-19,29;UBERON:0000956,6.99e-14,21;UBERON:0001869,6.99e-14,21;UBERON:0000203,6.99e-14,21;UBERON:0002619,1.54e-12,17;UBERON:0002021,5.89e-10,10;UBERON:0000411,5.89e-10,10;UBERON:0001950,5.89e-10,10;UBERON:0003076,1.83e-07,12;UBERON:0003057,1.83e-07,12;UBERON:0002420,5.40e-07,8;UBERON:0007245,5.40e-07,8;UBERON:0010009,5.40e-07,8;UBERON:0010011,5.40e-07,8;UBERON:0000454,5.40e-07,8 | |||
|phase1_expression=11.5307169915452,0,0,0,0,0,0.467225281191051,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,36.0583550240536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.25913075478431,0.65407546914134,1.75748946187577,2.91644848611425,0.55994568650145,0,0,0.725362142011344,0,0,0,0,16.7922662513466,12.6957835025288,12.0427966666174,1.0165335962074,1.77858959222228,0,0,0,0,0.384218305321555,2.69592992002042,2.29510095163874,2.73422449756797,31.992910253226,32.6885440608388,5.87955836231779,6.3258010872036,2.75765635983006,188.298156508955,227.411149129719,171.424891113968,19.6510568717989,24.0612502674337,22.3992749339407,148.246172469733,195.841388291025,195.734555402094,26.8112012781038,20.3591503542717,14.1663578827228,1.81742863999642,2.04043212288321,0.289864488701678,0,0,0,0,0,7.02222100658759,0,0,0.35333957451034,4.22530259330042,0,0,0,0,0,0,4.90990682791958,0,1.92974780784272,2.25530924795977,3.34912026143355,2.53677046981664,3.61734337326294,1.76383060703557,0.879666139307728,0,0.144599356919912,0,0,0,0.484875253135222,0,26.0574909340277,27.8564120061895,0.255457055208591,0,0,0,156.830799456849,151.890200135784,18.7224984648168,224.581021688421,258.528327360964,158.957854088063,144.881447919508,0.305518091550949,0,0.252722758433675,6.94458124425364,0.520481771850815,1.60931473103431,1.80062129805349,2.26057226753573,3.94611695077702,4.61209393025459,5.62210347358373,14.2286853906459,0.215567992932842,0.567318240503458,0,0.219195732427575,0.278047249225598,0,0.411564272815887,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0.164167464079095,0.324275238183423,0,0,0,139.211945949452,12.9659811597898,0.330418782983798,0.793351699990633,0.213288250535234,1.39342003116263,1.28867461322093,1.61346819698674,0.667134131534611,2.28270751335071,0.474529061544512,1.97638745668813,2.01068167040216,2.78539060857611,0.974820435595601,0.898819408654221,0.648414149624083,0.796565093017469,0.189667900953082,0.571242563048644,0,0,0.193952487167626,0.140271639780637,0.126473074248515,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0.184753190166605,0.757965647081939,0,0.169745085775188,0.234690248288502,0.335012514883631,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,148.990947508671,134.441804521257,0,0.252470927204373,2.83957397474631,1.95219372148319,4.30846795465598,1.67278158566786,0.668396022247182,1.69845918473299,3.23848561339915,5.84511715822624,3.55759000151871,223.960957546,0.141940085208269,0,0.325773918707152,0,1.32745138339963,0.485561272309963,0.302323556964751,0.188605079755898,0.590603785761546,0.614870295887855,1.03371317267288,2.18120237686503,0.712994756769443,0.632073515871632,0,0,44.2571487479924,1.08036656418786,1.16422815404479,1.50035924522115,3.72414490648775,3.38900753443934,4.11372551505302,4.56697423671899,0,0,0.661585194164886,0,0.645857706783622,0.0603129249281559,0.238744688006273,0,1.7488850197791,125.532929461115,0,0.206386867963223,0,0,0,0.228778173206523,0,0,0,0.954670618015114,0.949007980743406,1.01659733563424,1.29606408986162,1.67270636811575,2.18362563746178,2.69728692769641,3.30613822901344,1.04702376793612,1.16653475962614,1.24267862617385,0,0.149516546043979,0,0,0.387479470433193,0.506868376472335,0,0,0.104859344425711,0,0.288030006257865,0,0.202725215290164,0.102710957164827,0.25984164595559,0.179026695667481,0.198681354781265,0,0,0.100966449948148,0,0,0,0,0,0.680191150845634,0,0,0,0.965947970160952,0,0,0,0,193.145130175037,196.098550752057,177.597609166213,155.18342365635,335.005352167844,327.84095146713,330.761025113585,318.377090679524,334.872240239327,356.219094485252,1.55681021376265,2.79317411380722,2.56100408631201,3.40349403895612,1.46729213839588,2.75765262675021,1.55572709461131,3.5025959730612,1.60459604795908,2.52697211763797,1.52087579934144,2.82939512079114,4.02658482120494,3.52138338226781,3.33125719942557,3.33405583898152,3.36064545240081,2.31491064556446,4.53294490883637,2.35518272215036,2.40008476669791,4.08194354166476,2.38436189947321,3.77900683244054,2.82328141245992,3.29996970777538,4.75612729469209,2.10455769150274,3.39510284614654,1.68342681497322,3.32178050747688,3.15214343601803,3.6830793885272,2.63392630016142,2.70069255373598,4.24677982494508,2.10538447600868,1.93383948643468,0.765153328275374,1.54413993383661,0.463735671240843 | |||
|short_description=p1@Nrsn1 | |||
}} |
Revision as of 00:15, 13 September 2013
Short description: | p1@Nrsn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nrsn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_NM_009513, uc007pwx.2_5end |
EntrezGene: | Nrsn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.52e-16 | 33 |
neuronal stem cell | 1.52e-16 | 33 |
neuroblast | 1.52e-16 | 33 |
electrically signaling cell | 1.52e-16 | 33 |
CNS neuron (sensu Vertebrata) | 9.98e-15 | 23 |
neuroblast (sensu Vertebrata) | 9.98e-15 | 23 |
ectodermal cell | 1.60e-14 | 44 |
neurectodermal cell | 1.60e-14 | 44 |
neural cell | 4.79e-14 | 43 |
electrically responsive cell | 4.74e-12 | 39 |
electrically active cell | 4.74e-12 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.