FFCP PHASE1:Mm9::chr13:30878378..30878387,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=7|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:30878378..30878387,+|id=chr13:30878378..30878387,+|ontology_enrichment_celltype=CL:0000624!2.15e-50!8;CL:0000791!9.68e-45!9;CL:0000789!9.68e-45!9;CL:0002420!9.68e-45!9;CL:0002419!9.68e-45!9;CL:0000790!9.68e-45!9;CL:0000838!2.58e-42!12;CL:0000542!5.26e-39!13;CL:0000051!5.26e-39!13;CL:0000893!1.47e-38!6;CL:0002489!1.47e-38!6;CL:0000898!1.47e-38!6;CL:0000809!1.47e-38!6;CL:0000810!1.47e-38!6;CL:0000895!1.47e-38!6;CL:0000808!1.47e-38!6;CL:0000894!1.47e-38!6;CL:0000806!1.47e-38!6;CL:0000807!1.47e-38!6;CL:0000805!1.47e-38!6;CL:0002425!1.47e-38!6;CL:0002436!1.47e-38!6;CL:0002427!1.47e-38!6;CL:0002428!1.47e-38!6;CL:0002429!1.47e-38!6;CL:0002433!1.47e-38!6;CL:0002431!1.47e-38!6;CL:0002432!1.47e-38!6;CL:0000084!1.65e-36!11;CL:0000827!1.65e-36!11;CL:0000738!1.19e-29!17;CL:0002087!1.19e-29!17;CL:0002031!6.67e-20!25;CL:0000988!7.09e-19!32;CL:0002032!7.09e-19!32;CL:0000037!7.09e-19!32;CL:0000566!7.09e-19!32;CL:0000837!7.09e-19!32;CL:0000219!5.12e-13!54;CL:0002320!8.30e-13!46;CL:0000134!8.30e-13!46;CL:0000034!1.03e-09!97;CL:0000144!7.51e-09!121;CL:0000012!7.51e-09!121;CL:0000063!1.40e-08!66;CL:0000945!8.50e-08!1;CL:0000236!8.50e-08!1;CL:0000826!8.50e-08!1;CL:0000815!2.37e-07!1;CL:0000792!2.37e-07!1|ontology_enrichment_celltype_v019_2=CL:0000893,6.34e-47,6;CL:0002489,6.34e-47,6;CL:0000898,6.34e-47,6;CL:0000809,6.34e-47,6;CL:0000810,6.34e-47,6;CL:0000895,6.34e-47,6;CL:0000808,6.34e-47,6;CL:0000894,6.34e-47,6;CL:0000806,6.34e-47,6;CL:0000807,6.34e-47,6;CL:0000805,6.34e-47,6;CL:0002425,6.34e-47,6;CL:0002436,6.34e-47,6;CL:0002427,6.34e-47,6;CL:0002428,6.34e-47,6;CL:0002429,6.34e-47,6;CL:0002433,6.34e-47,6;CL:0002431,6.34e-47,6;CL:0002432,6.34e-47,6;CL:0000838,1.18e-36,12;CL:0000624,1.94e-35,8;CL:0000542,6.63e-34,13;CL:0000051,6.63e-34,13;CL:0000791,1.33e-31,9;CL:0000789,1.33e-31,9;CL:0002420,1.33e-31,9;CL:0002419,1.33e-31,9;CL:0000790,1.33e-31,9;CL:0000738,3.95e-26,17;CL:0002087,3.95e-26,17;CL:0000084,5.07e-26,11;CL:0000827,5.07e-26,11;CL:0000945,2.59e-18,1;CL:0000236,2.59e-18,1;CL:0000826,2.59e-18,1;CL:0002031,5.10e-18,25;CL:0000988,3.12e-14,32;CL:0002032,3.12e-14,32;CL:0000037,3.12e-14,32;CL:0000837,3.12e-14,32;CL:0002320,4.29e-10,46;CL:0000134,4.29e-10,46;CL:0000219,1.10e-08,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!8.30e-13!46;UBERON:0002370!7.15e-10!23;UBERON:0000974!7.15e-10!23;UBERON:0004807!7.15e-10!23;UBERON:0005058!7.15e-10!23;UBERON:0003351!7.15e-10!23;UBERON:0009113!7.15e-10!23;UBERON:0003295!7.15e-10!23;UBERON:0009722!7.15e-10!23;UBERON:0005562!7.15e-10!23;UBERON:0007690!7.15e-10!23;UBERON:0006562!1.91e-09!24;UBERON:0003408!1.91e-09!24;UBERON:0001557!1.91e-09!24;UBERON:0001042!1.91e-09!24;UBERON:0008814!1.91e-09!24;UBERON:0009145!1.91e-09!24;UBERON:0000072!2.35e-08!27;UBERON:0004177!9.39e-08!29|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.48e-13,23;UBERON:0000974,7.48e-13,23;UBERON:0004807,7.48e-13,23;UBERON:0005058,7.48e-13,23;UBERON:0003351,7.48e-13,23;UBERON:0009113,7.48e-13,23;UBERON:0003295,7.48e-13,23;UBERON:0009722,7.48e-13,23;UBERON:0005562,7.48e-13,23;UBERON:0007690,7.48e-13,23;UBERON:0006562,2.40e-12,24;UBERON:0003408,2.40e-12,24;UBERON:0001557,2.40e-12,24;UBERON:0001042,2.40e-12,24;UBERON:0008814,2.40e-12,24;UBERON:0009145,2.40e-12,24;UBERON:0000072,4.75e-11,27;UBERON:0004177,2.47e-10,29;UBERON:0005057,2.47e-10,29;UBERON:0002384,4.29e-10,46;UBERON:0000077,1.14e-08,35;UBERON:0007811,1.91e-08,36;UBERON:0000065,1.74e-07,41;UBERON:0001004,2.54e-07,42;UBERON:0000153,3.65e-07,43;UBERON:0002390,7.19e-07,45;UBERON:0003061,7.19e-07,45|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,3.37892933164,2.57470978954193,1.54096171402954,1.83475965689274,0.342401459862411,0.174840804837995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00669563634642,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.849892149969277,0.139951452323658,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr13:30878378..30878387,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:30878378..30878387,+ | |||
|id=chr13:30878378..30878387,+ | |||
|ontology_enrichment_celltype=CL:0000624!2.15e-50!8;CL:0000791!9.68e-45!9;CL:0000789!9.68e-45!9;CL:0002420!9.68e-45!9;CL:0002419!9.68e-45!9;CL:0000790!9.68e-45!9;CL:0000838!2.58e-42!12;CL:0000542!5.26e-39!13;CL:0000051!5.26e-39!13;CL:0000893!1.47e-38!6;CL:0002489!1.47e-38!6;CL:0000898!1.47e-38!6;CL:0000809!1.47e-38!6;CL:0000810!1.47e-38!6;CL:0000895!1.47e-38!6;CL:0000808!1.47e-38!6;CL:0000894!1.47e-38!6;CL:0000806!1.47e-38!6;CL:0000807!1.47e-38!6;CL:0000805!1.47e-38!6;CL:0002425!1.47e-38!6;CL:0002436!1.47e-38!6;CL:0002427!1.47e-38!6;CL:0002428!1.47e-38!6;CL:0002429!1.47e-38!6;CL:0002433!1.47e-38!6;CL:0002431!1.47e-38!6;CL:0002432!1.47e-38!6;CL:0000084!1.65e-36!11;CL:0000827!1.65e-36!11;CL:0000738!1.19e-29!17;CL:0002087!1.19e-29!17;CL:0002031!6.67e-20!25;CL:0000988!7.09e-19!32;CL:0002032!7.09e-19!32;CL:0000037!7.09e-19!32;CL:0000566!7.09e-19!32;CL:0000837!7.09e-19!32;CL:0000219!5.12e-13!54;CL:0002320!8.30e-13!46;CL:0000134!8.30e-13!46;CL:0000034!1.03e-09!97;CL:0000144!7.51e-09!121;CL:0000012!7.51e-09!121;CL:0000063!1.40e-08!66;CL:0000945!8.50e-08!1;CL:0000236!8.50e-08!1;CL:0000826!8.50e-08!1;CL:0000815!2.37e-07!1;CL:0000792!2.37e-07!1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000893,6.34e-47,6;CL:0002489,6.34e-47,6;CL:0000898,6.34e-47,6;CL:0000809,6.34e-47,6;CL:0000810,6.34e-47,6;CL:0000895,6.34e-47,6;CL:0000808,6.34e-47,6;CL:0000894,6.34e-47,6;CL:0000806,6.34e-47,6;CL:0000807,6.34e-47,6;CL:0000805,6.34e-47,6;CL:0002425,6.34e-47,6;CL:0002436,6.34e-47,6;CL:0002427,6.34e-47,6;CL:0002428,6.34e-47,6;CL:0002429,6.34e-47,6;CL:0002433,6.34e-47,6;CL:0002431,6.34e-47,6;CL:0002432,6.34e-47,6;CL:0000838,1.18e-36,12;CL:0000624,1.94e-35,8;CL:0000542,6.63e-34,13;CL:0000051,6.63e-34,13;CL:0000791,1.33e-31,9;CL:0000789,1.33e-31,9;CL:0002420,1.33e-31,9;CL:0002419,1.33e-31,9;CL:0000790,1.33e-31,9;CL:0000738,3.95e-26,17;CL:0002087,3.95e-26,17;CL:0000084,5.07e-26,11;CL:0000827,5.07e-26,11;CL:0000945,2.59e-18,1;CL:0000236,2.59e-18,1;CL:0000826,2.59e-18,1;CL:0002031,5.10e-18,25;CL:0000988,3.12e-14,32;CL:0002032,3.12e-14,32;CL:0000037,3.12e-14,32;CL:0000837,3.12e-14,32;CL:0002320,4.29e-10,46;CL:0000134,4.29e-10,46;CL:0000219,1.10e-08,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!8.30e-13!46;UBERON:0002370!7.15e-10!23;UBERON:0000974!7.15e-10!23;UBERON:0004807!7.15e-10!23;UBERON:0005058!7.15e-10!23;UBERON:0003351!7.15e-10!23;UBERON:0009113!7.15e-10!23;UBERON:0003295!7.15e-10!23;UBERON:0009722!7.15e-10!23;UBERON:0005562!7.15e-10!23;UBERON:0007690!7.15e-10!23;UBERON:0006562!1.91e-09!24;UBERON:0003408!1.91e-09!24;UBERON:0001557!1.91e-09!24;UBERON:0001042!1.91e-09!24;UBERON:0008814!1.91e-09!24;UBERON:0009145!1.91e-09!24;UBERON:0000072!2.35e-08!27;UBERON:0004177!9.39e-08!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.48e-13,23;UBERON:0000974,7.48e-13,23;UBERON:0004807,7.48e-13,23;UBERON:0005058,7.48e-13,23;UBERON:0003351,7.48e-13,23;UBERON:0009113,7.48e-13,23;UBERON:0003295,7.48e-13,23;UBERON:0009722,7.48e-13,23;UBERON:0005562,7.48e-13,23;UBERON:0007690,7.48e-13,23;UBERON:0006562,2.40e-12,24;UBERON:0003408,2.40e-12,24;UBERON:0001557,2.40e-12,24;UBERON:0001042,2.40e-12,24;UBERON:0008814,2.40e-12,24;UBERON:0009145,2.40e-12,24;UBERON:0000072,4.75e-11,27;UBERON:0004177,2.47e-10,29;UBERON:0005057,2.47e-10,29;UBERON:0002384,4.29e-10,46;UBERON:0000077,1.14e-08,35;UBERON:0007811,1.91e-08,36;UBERON:0000065,1.74e-07,41;UBERON:0001004,2.54e-07,42;UBERON:0000153,3.65e-07,43;UBERON:0002390,7.19e-07,45;UBERON:0003061,7.19e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,3.37892933164,2.57470978954193,1.54096171402954,1.83475965689274,0.342401459862411,0.174840804837995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00669563634642,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.849892149969277,0.139951452323658,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:30878378..30878387,+ | |||
}} |
Revision as of 00:21, 13 September 2013
Short description: | p@chr13:30878378..30878387, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:30878378..30878387, + |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 7.48e-13 | 23 |
neck | 7.48e-13 | 23 |
respiratory system epithelium | 7.48e-13 | 23 |
hemolymphoid system gland | 7.48e-13 | 23 |
pharyngeal epithelium | 7.48e-13 | 23 |
thymic region | 7.48e-13 | 23 |
pharyngeal gland | 7.48e-13 | 23 |
entire pharyngeal arch endoderm | 7.48e-13 | 23 |
thymus primordium | 7.48e-13 | 23 |
early pharyngeal endoderm | 7.48e-13 | 23 |
pharynx | 2.40e-12 | 24 |
gland of gut | 2.40e-12 | 24 |
upper respiratory tract | 2.40e-12 | 24 |
chordate pharynx | 2.40e-12 | 24 |
pharyngeal arch system | 2.40e-12 | 24 |
pharyngeal region of foregut | 2.40e-12 | 24 |
segment of respiratory tract | 4.75e-11 | 27 |
hemopoietic organ | 2.47e-10 | 29 |
immune organ | 2.47e-10 | 29 |
connective tissue | 4.29e-10 | 46 |
mixed endoderm/mesoderm-derived structure | 1.14e-08 | 35 |
craniocervical region | 1.91e-08 | 36 |
respiratory tract | 1.74e-07 | 41 |
respiratory system | 2.54e-07 | 42 |
anterior region of body | 3.65e-07 | 43 |
hematopoietic system | 7.19e-07 | 45 |
blood island | 7.19e-07 | 45 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.