FFCP PHASE1:Mm9::chr14:16271472..16271477,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=218763|HGNC=|MCL_coexpression_id=10|UniProt=Q8VCH9,Q543Z7|association_with_transcript=23bp_to_ENSMUST00000055211,NM_146052,uc007sgu.2_5end|description=CAGE_peak_11_at_Lrrc3b_5end|id=chr14:16271472..16271477,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!6.45e-11!18;UBERON:0000948!6.45e-11!18;UBERON:0005498!6.45e-11!18;UBERON:0004140!6.45e-11!18;UBERON:0009881!6.45e-11!18;UBERON:0004141!6.45e-11!18;UBERON:0003084!6.45e-11!18;UBERON:0007005!6.45e-11!18;UBERON:0004139!6.45e-11!18;UBERON:0004291!6.45e-11!18;UBERON:0003103!4.99e-08!43;UBERON:0004535!7.53e-08!23;UBERON:0001009!7.53e-08!23|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.01e-24,18;UBERON:0000948,1.01e-24,18;UBERON:0005498,1.01e-24,18;UBERON:0004140,1.01e-24,18;UBERON:0009881,1.01e-24,18;UBERON:0004141,1.01e-24,18;UBERON:0003084,1.01e-24,18;UBERON:0007005,1.01e-24,18;UBERON:0004139,1.01e-24,18;UBERON:0004291,1.01e-24,18;UBERON:0004535,1.61e-19,23;UBERON:0001009,1.61e-19,23;UBERON:0004872,8.03e-14,33;UBERON:0003103,9.33e-11,43;UBERON:0003914,6.83e-10,47|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0.527545150920775,0.0914876436024097,0,0,0,0.45839474333043,0.589257170947335,0.142371680799103,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,0,0,0.376963056338593,0,0,0,0.324482526135515,0,0,0,0,0,0.229902104433473,0,0,0.0680364991513279,0,0.0937017245597288,0.776110112217047,0,0,0,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0,0,0,0.23674473558521,0.393528463494808,0.308534225774757,0.232533944750408,0.268273401399619,0.233530684734339,0.329119699826961,1.14917224855367,2.75633952455909,2.63159977365598,1.53685080703735,2.01309628140558,0,0,0.330418782983798,0,0,0,0,0,0.444756087689741,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0,0,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0.238043640886014,0,0,0,0,0.327726629431476,0,0,0,0,0,0,0,0,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228778173206523,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0.299033092087958,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0.39736270956253,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0.243106717068294,0,0,0.222246727801615,0,0,0,0,0,0,0.192075457214608,0,0,0.231768651889711,0.192909220463705,0,0,0.342869252385415,0,0,0,0,0.169229215783353,0.182927972872773,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0.231867835620421|short_description=p11@Lrrc3b}} | ||
|EntrezGene=218763 | |||
|HGNC= | |||
|MCL_coexpression_id=10 | |||
|UniProt=Q8VCH9,Q543Z7 | |||
|association_with_transcript=23bp_to_ENSMUST00000055211,NM_146052,uc007sgu.2_5end | |||
|description=CAGE_peak_11_at_Lrrc3b_5end | |||
|id=chr14:16271472..16271477,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!6.45e-11!18;UBERON:0000948!6.45e-11!18;UBERON:0005498!6.45e-11!18;UBERON:0004140!6.45e-11!18;UBERON:0009881!6.45e-11!18;UBERON:0004141!6.45e-11!18;UBERON:0003084!6.45e-11!18;UBERON:0007005!6.45e-11!18;UBERON:0004139!6.45e-11!18;UBERON:0004291!6.45e-11!18;UBERON:0003103!4.99e-08!43;UBERON:0004535!7.53e-08!23;UBERON:0001009!7.53e-08!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.01e-24,18;UBERON:0000948,1.01e-24,18;UBERON:0005498,1.01e-24,18;UBERON:0004140,1.01e-24,18;UBERON:0009881,1.01e-24,18;UBERON:0004141,1.01e-24,18;UBERON:0003084,1.01e-24,18;UBERON:0007005,1.01e-24,18;UBERON:0004139,1.01e-24,18;UBERON:0004291,1.01e-24,18;UBERON:0004535,1.61e-19,23;UBERON:0001009,1.61e-19,23;UBERON:0004872,8.03e-14,33;UBERON:0003103,9.33e-11,43;UBERON:0003914,6.83e-10,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0.527545150920775,0.0914876436024097,0,0,0,0.45839474333043,0.589257170947335,0.142371680799103,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,0,0,0.376963056338593,0,0,0,0.324482526135515,0,0,0,0,0,0.229902104433473,0,0,0.0680364991513279,0,0.0937017245597288,0.776110112217047,0,0,0,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0,0,0,0.23674473558521,0.393528463494808,0.308534225774757,0.232533944750408,0.268273401399619,0.233530684734339,0.329119699826961,1.14917224855367,2.75633952455909,2.63159977365598,1.53685080703735,2.01309628140558,0,0,0.330418782983798,0,0,0,0,0,0.444756087689741,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0,0,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0.238043640886014,0,0,0,0,0.327726629431476,0,0,0,0,0,0,0,0,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228778173206523,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0.299033092087958,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0.39736270956253,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0.243106717068294,0,0,0.222246727801615,0,0,0,0,0,0,0.192075457214608,0,0,0.231768651889711,0.192909220463705,0,0,0.342869252385415,0,0,0,0,0.169229215783353,0.182927972872773,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0.231867835620421 | |||
|short_description=p11@Lrrc3b | |||
}} |
Revision as of 01:42, 13 September 2013
Short description: | p11@Lrrc3b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Lrrc3b_5end |
Coexpression cluster: | MCL_coexpression_mm9:10 |
Association with transcript: | 23bp_to_ENSMUST00000055211, NM_146052, uc007sgu.2_5end |
EntrezGene: | Lrrc3b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.01e-24 | 18 |
heart | 1.01e-24 | 18 |
primitive heart tube | 1.01e-24 | 18 |
primary heart field | 1.01e-24 | 18 |
anterior lateral plate mesoderm | 1.01e-24 | 18 |
heart tube | 1.01e-24 | 18 |
heart primordium | 1.01e-24 | 18 |
cardiac mesoderm | 1.01e-24 | 18 |
cardiogenic plate | 1.01e-24 | 18 |
heart rudiment | 1.01e-24 | 18 |
cardiovascular system | 1.61e-19 | 23 |
circulatory system | 1.61e-19 | 23 |
splanchnic layer of lateral plate mesoderm | 8.03e-14 | 33 |
compound organ | 9.33e-11 | 43 |
epithelial tube | 6.83e-10 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.