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FFCP PHASE1:Mm9::chr14:56223010..56223067,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=16391|HGNC=|MCL_coexpression_id=542|UniProt=Q61179,Q3UKQ7|association_with_transcript=188bp_to_ENSMUST00000130697,NM_008394,uc007tzl.2_5end|description=CAGE_peak_1_at_Irf9_5end|id=chr14:56223010..56223067,+|ontology_enrichment_celltype=CL:0000219!3.75e-10!54;CL:0002320!2.76e-09!46;CL:0000134!2.76e-09!46;CL:0002031!1.04e-07!25;CL:0000063!1.53e-07!66;CL:0000988!6.21e-07!32;CL:0002032!6.21e-07!32;CL:0000037!6.21e-07!32;CL:0000566!6.21e-07!32;CL:0000837!6.21e-07!32|ontology_enrichment_celltype_v019_2=CL:0000219,3.74e-10,54;CL:0002320,2.75e-09,46;CL:0000134,2.75e-09,46;CL:0002031,1.04e-07,25;CL:0000988,6.20e-07,32;CL:0002032,6.20e-07,32;CL:0000037,6.20e-07,32;CL:0000837,6.20e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!2.17e-13!70;UBERON:0002193!1.19e-09!48;UBERON:0002390!2.02e-09!45;UBERON:0003061!2.02e-09!45;UBERON:0002384!2.76e-09!46;UBERON:0000926!7.44e-09!193;UBERON:0004120!7.44e-09!193;UBERON:0006603!7.44e-09!193;UBERON:0005057!2.50e-08!51;UBERON:0000490!3.72e-08!66;UBERON:0003081!5.10e-08!88;UBERON:0005256!3.11e-07!47;UBERON:0003104!3.57e-07!131;UBERON:0009142!3.57e-07!131;UBERON:0004119!4.48e-07!130;UBERON:0000925!4.48e-07!130;UBERON:0006595!4.48e-07!130;UBERON:0002204!4.60e-07!32|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.19e-09,48;UBERON:0002405,1.19e-09,48;UBERON:0002390,2.01e-09,45;UBERON:0003061,2.01e-09,45;UBERON:0002384,2.75e-09,46;UBERON:0004119,3.62e-08,118;UBERON:0000925,3.62e-08,118;UBERON:0006595,3.62e-08,118;UBERON:0000490,3.71e-08,66;UBERON:0005256,8.46e-08,45;UBERON:0000926,9.87e-08,120;UBERON:0004120,9.87e-08,120;UBERON:0006603,9.87e-08,120;UBERON:0004921,1.09e-07,114;UBERON:0003081,1.24e-07,87;UBERON:0001007,1.25e-07,116;UBERON:0001555,1.25e-07,116;UBERON:0007026,1.25e-07,116;UBERON:0002204,4.59e-07,32|phase1_expression=5.76535849577258,9.07336059862339,3.63999391511629,13.9133537201142,11.520601788766,4.8684988854448,7.47560449905682,51.0037127594226,12.3894075493467,8.19225842126977,3.25314139628459,3.5099749957948,44.3409890521823,38.4649770643589,27.9812199925157,49.4039652431175,45.4715220783295,54.8904167723334,43.053932152202,30.9804445812562,8.50432901510698,15.8865521921416,21.9407822876706,6.87967418011649,5.96464130774642,6.89078356938024,6.03066794622705,5.38678081714723,14.6318032981408,10.5852654499171,3.76941868114018,5.71527606113668,3.07532393792285,15.8481681015439,6.93243887403059,6.81562045969819,8.5751129630195,56.9203017802195,57.8188154947612,57.5876118371178,57.0584543390084,45.0810020072574,48.0655249500842,7.93149953246137,10.0363161907319,6.24058957349717,15.6478268869608,1.96222640742402,14.0599156950062,8.74934545834275,8.81914456239784,5.75010257459886,24.9996083026027,20.3101399763176,23.8626597391149,13.8920095459411,12.3209379173665,25.7836046138721,0.202316460859598,0,0,12.1984031544888,24.9002542911119,17.5480444869873,16.8107281636386,15.6305625288142,7.49000276296012,5.76327457982332,0.311068836925433,0.675029691658453,0.420649922702764,2.28520787523043,1.98781686856452,0.61245399607477,0.479227355091182,0,0,3.31987079021488,2.4577045320999,0.791317726381163,0.731901148819277,1.04182674111352,1.67509799400829,2.25105044012672,3.36156145108982,1.76777151284201,1.85083185038834,1.3047961207771,23.5508461266202,21.0844652697932,60.291813649949,23.2314446784974,8.15965600449301,7.55584468292944,12.3457519315057,7.16843019355737,5.89866564553358,7.6693645160126,5.97507810586598,4.24007489412408,2.95771181531029,21.815501160434,17.8363667794652,7.11066703153331,2.59789249213457,1.77351905832569,2.02209778005913,10.5049169341535,41.9479371508418,15.5864246018066,2.94925055502431,3.65358573974569,4.61230994512117,17.182381022999,11.4061045921634,14.702991185572,20.2699873542187,14.749134405831,7.07688441559899,4.85300549842228,10.8212344045593,13.091631834651,5.59175283654366,1.17112318804619,2.93225389538837,14.0501380364725,14.0183695671927,7.19883277192089,12.4528822531603,2.54644086988199,4.57500602818627,1.88481528169297,1.39059456153821,1.53429274398198,1.66230435647648,1.1356888414743,10.3876151127323,14.8044295026011,22.9977710174644,6.52369753248069,1.17108398666433,1.60931473103431,1.62055916824814,2.41127708537144,4.49040894398764,2.0498195245576,2.52994656311268,5.69147415625834,0,2.08016688184601,2.63926686245923,2.84954452155847,4.44875598760957,3.83077383174383,4.93877127379064,3.38358253591438,4.21327912387941,6.94839349209731,9.09323198065896,1.24275463521301,2.34526059981096,3.06105504483725,2.13070262026689,2.95146347621106,3.23960937063494,2.32533944750408,7.77992864058896,8.29033930806903,4.44311594766397,6.07419617092652,6.48550476366846,8.04099930839328,13.3925570327541,11.0049263383505,1.47202963994889,2.6755199218614,14.2080076683033,10.0491215332147,1.91959425481711,0.464473343720877,2.44848176511977,4.43703754171354,5.33707305227689,11.4135375667535,12.3377556001573,12.1877226495768,13.3207660664143,19.4977342600328,14.4273424468149,8.9881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|EntrezGene=16391
|HGNC=
|MCL_coexpression_id=542
|UniProt=Q61179,Q3UKQ7
|association_with_transcript=188bp_to_ENSMUST00000130697,NM_008394,uc007tzl.2_5end
|description=CAGE_peak_1_at_Irf9_5end
|id=chr14:56223010..56223067,+
|ontology_enrichment_celltype=CL:0000219!3.75e-10!54;CL:0002320!2.76e-09!46;CL:0000134!2.76e-09!46;CL:0002031!1.04e-07!25;CL:0000063!1.53e-07!66;CL:0000988!6.21e-07!32;CL:0002032!6.21e-07!32;CL:0000037!6.21e-07!32;CL:0000566!6.21e-07!32;CL:0000837!6.21e-07!32
|ontology_enrichment_celltype_v019_2=CL:0000219,3.74e-10,54;CL:0002320,2.75e-09,46;CL:0000134,2.75e-09,46;CL:0002031,1.04e-07,25;CL:0000988,6.20e-07,32;CL:0002032,6.20e-07,32;CL:0000037,6.20e-07,32;CL:0000837,6.20e-07,32
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002405!2.17e-13!70;UBERON:0002193!1.19e-09!48;UBERON:0002390!2.02e-09!45;UBERON:0003061!2.02e-09!45;UBERON:0002384!2.76e-09!46;UBERON:0000926!7.44e-09!193;UBERON:0004120!7.44e-09!193;UBERON:0006603!7.44e-09!193;UBERON:0005057!2.50e-08!51;UBERON:0000490!3.72e-08!66;UBERON:0003081!5.10e-08!88;UBERON:0005256!3.11e-07!47;UBERON:0003104!3.57e-07!131;UBERON:0009142!3.57e-07!131;UBERON:0004119!4.48e-07!130;UBERON:0000925!4.48e-07!130;UBERON:0006595!4.48e-07!130;UBERON:0002204!4.60e-07!32
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.19e-09,48;UBERON:0002405,1.19e-09,48;UBERON:0002390,2.01e-09,45;UBERON:0003061,2.01e-09,45;UBERON:0002384,2.75e-09,46;UBERON:0004119,3.62e-08,118;UBERON:0000925,3.62e-08,118;UBERON:0006595,3.62e-08,118;UBERON:0000490,3.71e-08,66;UBERON:0005256,8.46e-08,45;UBERON:0000926,9.87e-08,120;UBERON:0004120,9.87e-08,120;UBERON:0006603,9.87e-08,120;UBERON:0004921,1.09e-07,114;UBERON:0003081,1.24e-07,87;UBERON:0001007,1.25e-07,116;UBERON:0001555,1.25e-07,116;UBERON:0007026,1.25e-07,116;UBERON:0002204,4.59e-07,32
|phase1_expression=5.76535849577258,9.07336059862339,3.63999391511629,13.9133537201142,11.520601788766,4.8684988854448,7.47560449905682,51.0037127594226,12.3894075493467,8.19225842126977,3.25314139628459,3.5099749957948,44.3409890521823,38.4649770643589,27.9812199925157,49.4039652431175,45.4715220783295,54.8904167723334,43.053932152202,30.9804445812562,8.50432901510698,15.8865521921416,21.9407822876706,6.87967418011649,5.96464130774642,6.89078356938024,6.03066794622705,5.38678081714723,14.6318032981408,10.5852654499171,3.76941868114018,5.71527606113668,3.07532393792285,15.8481681015439,6.93243887403059,6.81562045969819,8.5751129630195,56.9203017802195,57.8188154947612,57.5876118371178,57.0584543390084,45.0810020072574,48.0655249500842,7.93149953246137,10.0363161907319,6.24058957349717,15.6478268869608,1.96222640742402,14.0599156950062,8.74934545834275,8.81914456239784,5.75010257459886,24.9996083026027,20.3101399763176,23.8626597391149,13.8920095459411,12.3209379173665,25.7836046138721,0.202316460859598,0,0,12.1984031544888,24.9002542911119,17.5480444869873,16.8107281636386,15.6305625288142,7.49000276296012,5.76327457982332,0.311068836925433,0.675029691658453,0.420649922702764,2.28520787523043,1.98781686856452,0.61245399607477,0.479227355091182,0,0,3.31987079021488,2.4577045320999,0.791317726381163,0.731901148819277,1.04182674111352,1.67509799400829,2.25105044012672,3.36156145108982,1.76777151284201,1.85083185038834,1.3047961207771,23.5508461266202,21.0844652697932,60.291813649949,23.2314446784974,8.15965600449301,7.55584468292944,12.3457519315057,7.16843019355737,5.89866564553358,7.6693645160126,5.97507810586598,4.24007489412408,2.95771181531029,21.815501160434,17.8363667794652,7.11066703153331,2.59789249213457,1.77351905832569,2.02209778005913,10.5049169341535,41.9479371508418,15.5864246018066,2.94925055502431,3.65358573974569,4.61230994512117,17.182381022999,11.4061045921634,14.702991185572,20.2699873542187,14.749134405831,7.07688441559899,4.85300549842228,10.8212344045593,13.091631834651,5.59175283654366,1.17112318804619,2.93225389538837,14.0501380364725,14.0183695671927,7.19883277192089,12.4528822531603,2.54644086988199,4.57500602818627,1.88481528169297,1.39059456153821,1.53429274398198,1.66230435647648,1.1356888414743,10.3876151127323,14.8044295026011,22.9977710174644,6.52369753248069,1.17108398666433,1.60931473103431,1.62055916824814,2.41127708537144,4.49040894398764,2.0498195245576,2.52994656311268,5.69147415625834,0,2.08016688184601,2.63926686245923,2.84954452155847,4.44875598760957,3.83077383174383,4.93877127379064,3.38358253591438,4.21327912387941,6.94839349209731,9.09323198065896,1.24275463521301,2.34526059981096,3.06105504483725,2.13070262026689,2.95146347621106,3.23960937063494,2.32533944750408,7.77992864058896,8.29033930806903,4.44311594766397,6.07419617092652,6.48550476366846,8.04099930839328,13.3925570327541,11.0049263383505,1.47202963994889,2.6755199218614,14.2080076683033,10.0491215332147,1.91959425481711,0.464473343720877,2.44848176511977,4.43703754171354,5.33707305227689,11.4135375667535,12.3377556001573,12.1877226495768,13.3207660664143,19.4977342600328,14.4273424468149,8.98819408654222,8.21324589523838,10.7536287557358,1.51734320762465,2.51346727741403,3.38123207019241,1.62921062276251,8.72786192254316,7.50453272826409,5.88099795255593,5.31396532726568,9.57692239832386,7.40382983530803,13.0439155918346,7.17433954579204,5.50365186316968,11.0182435068578,8.72298521970563,10.6117950291063,8.14802725700543,28.1942214701794,14.4300351829781,8.51140380883053,14.3768206527355,13.7692150637346,8.7370548472077,9.09283960609602,10.9432422248366,8.20153986317724,20.8771104888263,1.51593129416388,1.30371981153621,1.86719594352707,2.58159273117352,4.85768146581266,14.5206620940468,16.7814937157707,9.61574379047765,13.730810758224,9.56728611944923,19.8274610806043,18.6499780415167,17.2132379711999,46.7452980211744,38.6173035511284,21.1458637398186,16.5562047782839,2.72936002979246,1.75817529888305,0.983609672260053,3.53459298086122,1.57754109708128,2.34263246577983,1.72338718186239,4.54040716109849,2.22798674082394,1.98153571552183,2.83367491172426,2.92255857911312,3.95287777946523,1.60660658210904,9.65192579416227,8.90328018336276,7.4928001302645,14.8473110675282,6.63725691699814,2.42780636154981,1.209294227859,2.07465587731488,5.02013217897314,6.14870295887855,13.6966995379157,9.08834323693764,6.06045543254026,4.74055136903724,6.32511651449993,5.15677716240934,9.53230896110606,1.62054984628179,3.75140182969988,3.42939256050548,4.61084607469911,4.28085162244969,4.60737257685939,13.700922710157,11.0295702789944,22.2423674407011,6.83638033970382,11.5420377059036,6.13564821444441,4.40284351975538,3.22305328808468,3.93938159388147,15.7399651780119,2.41052892613663,22.7258271461144,8.04908785056568,27.9643736328265,21.4740040985348,22.9646302571322,29.7411625168479,24.8168507791029,24.0716497996692,23.0793956253388,7.63736494412091,0.949007980743406,1.42323626988794,2.91614420218863,2.50905955217362,4.58561383866973,6.06889558731693,8.26534557253359,9.6849698534091,8.03612834409116,18.0188400795208,0.56369293868419,2.39226473670366,2.31641886639937,3.11121901350476,5.03723311563151,9.2925869019928,7.3935060346825,5.4685841634459,5.13810787685983,1.93267296660805,2.59227005632079,9.48033361884535,5.27085559754427,6.7789231728786,9.74406172333463,8.41425469637163,10.3314304486258,9.97622231015741,10.1905773750458,7.87538309595551,6.62999217898499,8.06609481094724,11.402572046551,7.40831180630537,10.4020442941596,6.34845074122592,3.10780334723691,0.538283139656854,3.35769232728157,10.0458588896739,15.5776454624481,21.9781949120718,5.14484109789758,10.0314420807073,1.12950368523413,0.920650473014354,1.14579102687879,1.20297227640581,2.05524755931193,0,2.02506750069542,1.80128481289688,2.26571204492102,2.5888015587591,0.62272408550506,2.39414924040619,2.90247129782028,3.64660075602441,2.51535795153579,4.77993121970037,3.77819437262746,5.35691148821125,1.92551525755089,8.33900798820532,6.59046179714623,6.97917463128482,5.89941497060259,5.8262888688431,8.38557846751954,5.23923060411381,6.60540657885676,5.20854895252004,2.88460130562315,7.50714492685426,7.20025430009372,5.32427418478012,6.19934093863034,7.26732083161643,6.39943786824248,3.72304274723377,4.93905526756486,8.94437018888666,5.56796866768033,6.17256498823512,4.1522256343461,5.61475549540712,5.32000356120596,4.49316839439301,4.24394544158511,4.24677982494508,10.292990771598,8.37997110788363,6.88637995447836,5.7353768971074,10.6659204385394
|short_description=p1@Irf9
}}

Revision as of 02:33, 13 September 2013

Short description:p1@Irf9
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Irf9_5end
Coexpression cluster:MCL_coexpression_mm9:542
Association with transcript: 188bp_to_ENSMUST00000130697, NM_008394, uc007tzl.2_5end
EntrezGene:Irf9
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Irf9

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.77
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I59.07
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.64
CD326+ enterocyte, pool1.CNhs13542.11848-124I313.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I411.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.87
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I87.48
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E951.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E712.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F28.19
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.25
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.51
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E444.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E838.46
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A127.98
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A349.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A545.47
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A254.89
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A443.05
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A630.98
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H215.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I921.94
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D16.88
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.96
GP2+ M cell, pool1.CNhs13228.11845-124H96.89
GP2+ M cell, pool2.CNhs13231.11846-124I16.03
GP2+ M cell, pool3.CNhs13240.11847-124I25.39
Ileum epithelium, pool1.CNhs13199.10252-104B914.63
Ileum epithelium, pool2.CNhs13232.10253-104C110.59
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.72
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F56.93
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F66.82
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F78.58
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G856.92
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H157.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H357.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G957.06
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H245.08
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H448.07
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D87.93
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D910.04
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B36.24
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B715.65
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.96
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B814.06
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C38.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C48.82
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A225.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I920.31
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A123.86
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C113.89
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E112.32
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C525.78
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C612.20
Mouse Meningeal cells, donor3.CNhs12109.11639-122D124.90
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C717.55
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E716.81
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D215.63
Mouse Microglia, donor1.CNhs12629.11718-123C87.49
Mouse Microglia, donor2.CNhs12634.11736-123E85.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.32
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.36
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D923.55
Mouse Schwann, donor2.CNhs12573.11746-123F921.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G360.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F723.23
Mouse hepatocyte, donor1.CNhs13078.11714-123C48.16
Mouse hepatocyte, donor3.CNhs12615.11637-122C87.56
Mouse hepatocyte, donor6.CNhs13090.11822-124F412.35
Mouse hepatocyte, donor8.CNhs13091.11824-124F67.17
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I77.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.24
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.96
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H121.82
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I817.84
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.60
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B610.50
accessory axillary lymph node, adult.CNhs10475.1063-29H941.95
adrenal gland, adult.CNhs10508.49-24D715.59
adrenal gland, embryo E14.CNhs11038.406-44C52.95
adrenal gland, embryo E16.CNhs11004.1254-43D63.65
adrenal gland, embryo E17.CNhs11043.1263-45I14.61
adrenal gland, embryo E18.CNhs11026.1262-18F517.18
adrenal gland, neonate N00.CNhs11191.1311-23C111.41
adrenal gland, neonate N25.CNhs11223.1377-27I314.70
amnion, adult pregnant day17.5.CNhs10488.583-22A820.27
aorta, adult.CNhs10498.46-23H114.75
bone (os femoris), adult.CNhs10483.56-12G27.08
bone (os femoris), neonate N02.CNhs11227.1985-43F54.85
bone (os femoris), neonate N16.CNhs11225.1525-43A610.82
bone (os femoris), neonate N20.CNhs11195.1350-25C313.09
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I22.93
colon, adult.CNhs10468.36-18H714.05
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C714.02
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D17.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D412.45
corpora quadrigemina, adult.CNhs10501.16-22A42.55
corpus striatum, adult.CNhs10487.19-21D84.58
corpus striatum, neonate N00.CNhs11226.630-43F11.88
cortex, adult.CNhs10473.12-14D51.39
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B110.39
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A214.80
epididymis, adult.CNhs10490.58-23B223.00
eyeball, adult.CNhs10484.31-12G46.52
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D42.41
eyeball, neonate N00.CNhs11207.633-15C64.49
eyeball, neonate N01.CNhs11140.1532-43E72.05
eyeball, neonate N02.CNhs11205.1551-44G82.53
eyeball, neonate N16.CNhs11188.777-19A25.69
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H22.08
forelimb, embryo E13.CNhs10589.384-1E22.64
forelimb, embryo E14.CNhs10577.413-26A82.85
forelimb, embryo E15.CNhs11007.437-20E74.45
forelimb, embryo E17.CNhs10598.1517-43C43.83
forelimb, embryo E18.CNhs11008.1520-43B54.94
gonad, embryo E13.CNhs11044.1564-45I63.38
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.21
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D26.95
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D59.09
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F52.35
heart, embryo E13.CNhs11013.376-3I93.06
heart, embryo E14.CNhs10597.403-26D42.13
heart, embryo E15.CNhs11017.431-16C82.95
heart, embryo E16.CNhs11021.457-17C63.24
heart, embryo E17.CNhs11025.479-18E52.33
heart, embryo E18.CNhs11030.1283-20G37.78
heart, neonate N00.CNhs11213.639-21E38.29
heart, neonate N03.CNhs11221.1349-25I24.44
heart, neonate N10.CNhs11118.749-24G16.07
heart, neonate N16.CNhs11209.782-15G16.49
heart, neonate N20.CNhs11127.821-26I68.04
heart, neonate N25.CNhs11196.1351-25D313.39
heart, neonate N30.CNhs11202.1390-42D211.00
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G12.68
intestinal mucosa, adult.CNhs10506.860-29I314.21
intestine, adult.CNhs10496.178-9A310.05
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D82.45
intestine, embryo E16.CNhs10585.463-22H44.44
intestine, embryo E17.CNhs10582.482-18D35.34
intestine, embryo E18.CNhs10526.1289-20F711.41
intestine, neonate N00.CNhs11126.644-26D112.34
intestine, neonate N01.CNhs11192.1322-23E912.19
intestine, neonate N06.CNhs11102.688-20B813.32
intestine, neonate N07.CNhs11095.720-20F219.50
intestine, neonate N10.CNhs11098.755-23A514.43
intestine, neonate N20.CNhs11187.827-18D18.99
intestine, neonate N25.CNhs11121.1352-25E38.21
intestine, neonate N30.CNhs11131.1384-42G110.75
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F82.51
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C78.73
kidney, neonate N00.CNhs11214.646-21G77.50
kidney, neonate N10.CNhs11206.758-6D55.88
kidney, neonate N20.CNhs11113.832-19I15.31
kidney, neonate N25.CNhs11122.1353-25F39.58
kidney, neonate N30.CNhs11203.1385-42H17.40
liver, adult pregnant day01.CNhs10466.508-5B213.04
liver, embryo E12.CNhs10601.355-15F87.17
liver, embryo E13.CNhs10524.378-3H65.50
liver, embryo E14.CNhs10594.409-16E111.02
liver, embryo E15.CNhs10520.433-16D78.72
liver, embryo E16.CNhs10523.462-17F510.61
liver, embryo E17.CNhs10510.481-18A38.15
liver, embryo E18.CNhs10579.499-43G428.19
liver, neonate N00.CNhs11117.641-24F414.43
liver, neonate N03.CNhs11123.1345-25G28.51
liver, neonate N06.CNhs11101.684-20A814.38
liver, neonate N07.CNhs11103.716-20H213.77
liver, neonate N10.CNhs11115.751-24B98.74
liver, neonate N20.CNhs11220.823-25A39.09
liver, neonate N25.CNhs11198.1368-26H110.94
liver, neonate N30.CNhs11106.1382-42D18.20
lung, adult.CNhs10474.28-22B120.88
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F81.30
lung, embryo E15.CNhs11020.432-17C51.87
lung, embryo E16.CNhs10998.458-17B62.58
lung, embryo E17.CNhs10605.480-44A64.86
lung, embryo E18.CNhs10583.1287-20I614.52
lung, neonate N00.CNhs11224.640-42C616.78
lung, neonate N06.CNhs11212.683-20E59.62
lung, neonate N07.CNhs11111.715-19A313.73
lung, neonate N10.CNhs11219.750-23E69.57
lung, neonate N20.CNhs11109.822-18A419.83
lung, neonate N25.CNhs11119.1359-25C718.65
lung, neonate N30.CNhs11133.1394-42H217.21
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A146.75
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A138.62
mammary gland, adult lactating day02.CNhs10480.595-22B621.15
mammary gland, adult pregnant day19.CNhs10476.588-5H216.56
medulla oblongata, adult.CNhs10477.17-12C22.73
medulla oblongata, neonate N30.CNhs11200.1396-42A31.76
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.53
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.54
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.95
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I79.65
ovary, embryo E18.CNhs11040.505-44H78.90
ovary, neonate N00.CNhs11217.1299-22I47.49
oviduct, adult pregnant day01.CNhs10500.988-6G614.85
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F42.43
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E52.07
pancreas, embryo E17.CNhs10599.1558-45G35.02
pancreas, embryo E18.CNhs10580.1535-43I76.15
pancreas, neonate N00.CNhs11105.645-26G913.70
pancreas, neonate N01.CNhs11138.1531-43D79.09
pancreas, neonate N02.CNhs11139.1539-43D86.06
pancreas, neonate N16.CNhs11136.787-43B64.74
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G89.53
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C73.75
pituitary gland, embryo E14.CNhs11037.398-44A53.43
pituitary gland, embryo E15.CNhs10592.427-16B94.61
pituitary gland, embryo E16.CNhs11036.449-43F64.28
pituitary gland, embryo E17.CNhs11039.1265-44F54.61
pituitary gland, neonate N00.CNhs11190.1308-22E913.70
placenta, adult pregnant day10.CNhs10472.539-13I711.03
placenta, adult pregnant day17.CNhs10464.577-18G322.24
prostate, adult.CNhs10470.859-1F86.84
skin, adult.CNhs10492.30-1C311.54
skin, neonate N00.CNhs11124.650-25G46.14
skin, neonate N03.CNhs11215.662-22H34.40
skin, neonate N06.CNhs11097.693-20I53.22
skin, neonate N10.CNhs11108.762-6C43.94
small intestine, neonate N16.CNhs11114.790-21I115.74
spinal cord, adult.CNhs10505.24-13C92.41
spleen, adult.CNhs10465.25-2G222.73
spleen, embryo E16.CNhs11035.461-43C18.05
spleen, embryo E18.CNhs11011.1271-21F227.96
spleen, neonate N10.CNhs11116.752-24D121.47
spleen, neonate N20.CNhs11112.824-19H122.96
spleen, neonate N25.CNhs11099.1354-25G329.74
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C624.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C924.07
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D323.08
stomach, adult.CNhs10503.33-1H67.64
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D42.92
stomach, embryo E17.CNhs11006.1035-18D52.51
stomach, embryo E18.CNhs10999.1286-20C64.59
stomach, neonate N03.CNhs11193.1340-24B86.07
stomach, neonate N07.CNhs11210.718-18A98.27
stomach, neonate N25.CNhs11104.1355-25E49.68
stomach, neonate N30.CNhs11134.1386-42I18.04
submandibular gland, adult.CNhs10469.59-29C118.02
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F52.39
testis, embryo E15.CNhs11034.443-27C52.32
testis, embryo E16.CNhs11033.470-26G53.11
testis, embryo E17.CNhs11029.486-18I55.04
testis, embryo E18.CNhs11027.503-18G59.29
testis, neonate N00.CNhs11189.1300-22B77.39
testis, neonate N07.CNhs11222.726-26I45.47
testis, neonate N10.CNhs11204.763-44D95.14
testis, neonate N20.CNhs11110.839-18H31.93
testis, neonate N30.CNhs11130.1391-42E22.59
thymus, adult.CNhs10471.38-12B59.48
thymus, embryo E14.CNhs11041.402-44I45.27
thymus, embryo E15.CNhs11005.430-45I26.78
thymus, embryo E16.CNhs11002.456-26C59.74
thymus, embryo E17.CNhs10581.478-18C18.41
thymus, embryo E18.CNhs10595.1273-19G410.33
thymus, neonate N02.CNhs11181.1541-43F89.98
thymus, neonate N03.CNhs11137.2104-43C710.19
thymus, neonate N06.CNhs11197.681-26C47.88
thymus, neonate N07.CNhs11211.713-19D36.63
thymus, neonate N10.CNhs11194.748-24E48.07
thymus, neonate N20.CNhs11186.820-7A211.40
thymus, neonate N25.CNhs11125.1362-25G77.41
thymus, neonate N30.CNhs11132.1393-42G210.40
tongue, adult.CNhs10499.32-1B46.35
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.36
urinary bladder, adult.CNhs10481.879-12E410.05
uterus, adult pregnant day19.CNhs10497.590-15F515.58
uterus, adult.CNhs10509.92-27E521.98
vagina, adult.CNhs10502.89-27D55.14
vesicular gland, adult.CNhs10491.51-27F810.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H22.90
whole body, embryo E14.5.CNhs10578.420-27D23.65
whole body, embryo E14.CNhs10519.395-14B12.52
whole body, embryo E16.CNhs10514.453-14F24.78
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.34
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.98
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.90
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G58.39
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.61
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.21
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G57.51
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.20
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.20
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.27
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.40
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.72
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G58.94
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.57
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.15
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.49
whole body, embryo E17.5.CNhs10513.490-9F94.24
whole body, embryo E17.CNhs10517.475-3I54.25
whole body, embryo E18.CNhs10516.493-3B310.29
whole body, neonate N00.CNhs10525.657-19C28.38
whole body, neonate N01.CNhs10576.659-23C66.89
whole body, neonate N06.CNhs10515.692-21D15.74
whole body, neonate N10.CNhs10518.761-6B410.67





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hemolymphoid system1.19e-0948
immune system1.19e-0948
hematopoietic system2.01e-0945
blood island2.01e-0945
connective tissue2.75e-0946
endoderm-derived structure3.62e-08118
endoderm3.62e-08118
presumptive endoderm3.62e-08118
unilaminar epithelium3.71e-0866
trunk mesenchyme8.46e-0845
mesoderm9.87e-08120
mesoderm-derived structure9.87e-08120
presumptive mesoderm9.87e-08120
subdivision of digestive tract1.09e-07114
lateral plate mesoderm1.24e-0787
digestive system1.25e-07116
digestive tract1.25e-07116
primitive gut1.25e-07116
musculoskeletal system4.59e-0732







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