FFCP PHASE1:Hg19::chr4:149363544..149363583,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4306|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7979|TSSclassifier=S|UniProt=B0ZBF8|association_with_transcript=-21bp_to_ENST00000342437_5end|description=CAGE_peak_3_at_NR3C2_5end|id=chr4:149363544..149363583,-|ontology_enrichment_celltype=CL:0000791!3.93e-09!18;CL:0000789!3.93e-09!18;CL:0002420!3.93e-09!18;CL:0002419!3.93e-09!18;CL:0000790!3.93e-09!18;CL:0000625!1.34e-07!11;CL:0000084!8.31e-07!25;CL:0000827!8.31e-07!25|ontology_enrichment_celltype_v019=CL:0000791;5.85e-14;18!CL:0000789;5.85e-14;18!CL:0002419;5.85e-14;18!CL:0000625;8.16e-11;11!CL:0000084;9.74e-11;25|ontology_enrichment_celltype_v019_2=CL:0000791,2.14e-14,18;CL:0000789,2.14e-14,18;CL:0002420,2.14e-14,18;CL:0002419,2.14e-14,18;CL:0000790,2.14e-14,18;CL:0000625,2.29e-11,11;CL:0000084,5.58e-11,25;CL:0000827,5.58e-11,25;CL:0000838,1.76e-07,52;CL:0000542,3.33e-07,53;CL:0000051,3.33e-07,53|ontology_enrichment_development_v019=CL:0000790;5.85e-14;18!UBERON:0006601;1.83e-08;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.88e-45!115;UBERON:0001049!2.44e-17!57;UBERON:0005068!2.44e-17!57;UBERON:0006241!2.44e-17!57;UBERON:0007135!2.44e-17!57;UBERON:0003075!2.20e-13!86;UBERON:0007284!2.20e-13!86;UBERON:0000955!6.43e-13!69;UBERON:0006238!6.43e-13!69;UBERON:0002616!8.77e-13!59;UBERON:0002346!1.33e-12!90;UBERON:0003080!1.98e-12!42;UBERON:0001017!3.80e-12!82;UBERON:0002780!5.32e-12!41;UBERON:0001890!5.32e-12!41;UBERON:0006240!5.32e-12!41;UBERON:0005743!6.65e-12!86;UBERON:0001893!3.68e-10!34;UBERON:0000073!4.33e-10!94;UBERON:0001016!4.33e-10!94;UBERON:0002020!8.22e-10!34;UBERON:0003528!8.22e-10!34;UBERON:0002791!1.21e-09!33;UBERON:0001869!3.86e-09!32;UBERON:0003056!6.32e-09!61;UBERON:0001950!3.00e-08!20;UBERON:0002619!5.54e-08!22;UBERON:0000025!1.36e-07!194;UBERON:0004111!8.27e-07!241;UBERON:0000153!8.31e-07!129;UBERON:0007811!8.31e-07!129|ontology_enrichment_uberon_v019=UBERON:0007023;7.96e-17;114!UBERON:0002780;4.02e-14;41!UBERON:0001890;4.02e-14;41!UBERON:0001893;2.09e-13;34!UBERON:0000073;4.06e-13;53!UBERON:0002616;4.06e-13;53!UBERON:0002791;1.27e-12;32!UBERON:0003528;1.30e-12;34!UBERON:0002020;1.30e-12;34!UBERON:0001869;1.94e-12;32!UBERON:0001950;6.93e-11;20!UBERON:0002619;7.18e-11;22!UBERON:0000956;5.42e-09;25!UBERON:0000203;5.42e-09;25!UBERON:0001017;2.01e-08;75!UBERON:0002420;3.55e-08;9!UBERON:0000125;3.55e-08;9!UBERON:0007245;3.55e-08;9!UBERON:0002308;3.55e-08;9!UBERON:0010009;3.55e-08;9!UBERON:0010011;3.55e-08;9!UBERON:0000454;3.55e-08;9!UBERON:0000955;1.37e-07;68!UBERON:0009663;6.16e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.57e-67,114;UBERON:0001049,4.00e-25,56;UBERON:0005068,4.00e-25,56;UBERON:0006241,4.00e-25,56;UBERON:0007135,4.00e-25,56;UBERON:0000073,5.68e-23,53;UBERON:0002616,5.68e-23,53;UBERON:0002780,1.37e-19,41;UBERON:0001890,1.37e-19,41;UBERON:0003080,1.37e-19,41;UBERON:0006240,1.37e-19,41;UBERON:0003075,1.79e-18,82;UBERON:0007284,1.79e-18,82;UBERON:0002346,6.95e-17,86;UBERON:0000955,7.65e-17,68;UBERON:0006238,7.65e-17,68;UBERON:0001017,1.38e-16,81;UBERON:0001893,3.65e-16,34;UBERON:0003528,1.39e-15,34;UBERON:0002020,1.39e-15,34;UBERON:0001869,1.73e-14,32;UBERON:0002791,2.50e-14,32;UBERON:0001016,3.25e-14,89;UBERON:0003056,3.00e-13,61;UBERON:0010371,3.54e-12,104;UBERON:0010314,1.85e-11,132;UBERON:0002619,2.38e-11,22;UBERON:0001950,2.76e-11,20;UBERON:0000956,2.13e-09,25;UBERON:0000203,2.13e-09,25;UBERON:0011216,6.73e-09,223;UBERON:0000025,1.52e-08,192;UBERON:0002420,1.78e-08,9;UBERON:0007245,1.78e-08,9;UBERON:0010009,1.78e-08,9;UBERON:0010011,1.78e-08,9;UBERON:0000454,1.78e-08,9;UBERON:0000125,2.36e-08,9;UBERON:0002308,2.36e-08,9;UBERON:0004111,3.43e-08,240;UBERON:0009663,4.50e-07,7;UBERON:0003076,8.94e-07,15;UBERON:0003057,8.94e-07,15|phase1_expression=0.181678379270557,0.214100523890983,0.422863212287913,1.0007329835313,0.446961094427288,0,0,0,0,0.737201809504527,0.697801167972428,1.74753097704138,0.527533956456907,0.495065411840187,0,0,0,0,0,0.123121058076788,0.204000691244253,0.313454721478088,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0.767658796194425,0.464448369948228,0,0,0,0.232401601740905,0.710846162437108,0.293600439334847,2.76997704265939,0.601633342410425,1.73608696572681,1.34349284543955,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0.211255286311942,0.212604299965044,0.209658645508376,0.112328631146495,0.150176892841506,0.16072558669708,0,0.19891667719909,0,0,1.09227722252426,0.889509253863555,2.13365111283254,0.400395987036012,0.574752439954483,0,0.954053754535364,3.98449078376614,1.17447437874188,2.29363936875137,0,0,0,5.70458333330116,1.17903228824749,3.08402248499264,0.668745981562712,1.62961133316795,3.31413464014313,1.94826728407911,0.557052284425868,1.76763544484902,1.10766947291811,0.541607727530031,0.25618263945135,0.130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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4306 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7979 | |||
|TSSclassifier=S | |||
|UniProt=B0ZBF8 | |||
|association_with_transcript=-21bp_to_ENST00000342437_5end | |||
|description=CAGE_peak_3_at_NR3C2_5end | |||
|id=chr4:149363544..149363583,- | |||
|ontology_enrichment_celltype=CL:0000791!3.93e-09!18;CL:0000789!3.93e-09!18;CL:0002420!3.93e-09!18;CL:0002419!3.93e-09!18;CL:0000790!3.93e-09!18;CL:0000625!1.34e-07!11;CL:0000084!8.31e-07!25;CL:0000827!8.31e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000791;5.85e-14;18!CL:0000789;5.85e-14;18!CL:0002419;5.85e-14;18!CL:0000625;8.16e-11;11!CL:0000084;9.74e-11;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.14e-14,18;CL:0000789,2.14e-14,18;CL:0002420,2.14e-14,18;CL:0002419,2.14e-14,18;CL:0000790,2.14e-14,18;CL:0000625,2.29e-11,11;CL:0000084,5.58e-11,25;CL:0000827,5.58e-11,25;CL:0000838,1.76e-07,52;CL:0000542,3.33e-07,53;CL:0000051,3.33e-07,53 | |||
|ontology_enrichment_development_v019=CL:0000790;5.85e-14;18!UBERON:0006601;1.83e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|phase1_expression=0.181678379270557,0.214100523890983,0.422863212287913,1.0007329835313,0.446961094427288,0,0,0,0,0.737201809504527,0.697801167972428,1.74753097704138,0.527533956456907,0.495065411840187,0,0,0,0,0,0.123121058076788,0.204000691244253,0.313454721478088,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0.767658796194425,0.464448369948228,0,0,0,0.232401601740905,0.710846162437108,0.293600439334847,2.76997704265939,0.601633342410425,1.73608696572681,1.34349284543955,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0.211255286311942,0.212604299965044,0.209658645508376,0.112328631146495,0.150176892841506,0.16072558669708,0,0.19891667719909,0,0,1.09227722252426,0.889509253863555,2.13365111283254,0.400395987036012,0.574752439954483,0,0.954053754535364,3.98449078376614,1.17447437874188,2.29363936875137,0,0,0,5.70458333330116,1.17903228824749,3.08402248499264,0.668745981562712,1.62961133316795,3.31413464014313,1.94826728407911,0.557052284425868,1.76763544484902,1.10766947291811,0.541607727530031,0.25618263945135,0.130059347559878,0.164437904603676,0,0.579606171470105,3.70716407905151,3.74557159325598,4.18142095219907,0.453237370790265,2.29932296161153,2.06176467289578,2.02415753615602,2.54852331459277,1.95325036156926,1.90090408889675,3.01150238155546,3.96758494578697,3.74792179657038,2.60454977248419,2.46338399076314,4.03213486449465,2.94184215361858,4.92402973201517,0,0.670700859703636,0,0,0,0.144846518960824,0,0,1.03988298880475,0.443458794925128,0.351339142772504,3.27447688744282,0,0.741568885568859,0,0,0.398873881556595,0.238490624305342,0,0,1.19257444420023,1.72046919021225,1.04142150482278,1.13061588384802,0,1.37559020970034,0.835979866147242,2.06733407335463,2.13459757612026,2.00832367658802,0.805658634218294,0.760272105718513,0.732186172644509,1.47065232138347,1.62028389576352,1.96459402224975,1.79623498100936,1.80178368773316,0,0,0.549605231791222,0,0,0,0.993943903390637,0.25326102332916,1.85372853138506,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0.408308342509787,0,0.206651562351531,0,0.247266929278557,0,0,0,0.125118519871964,0,0.438977620880838,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.132529768321485,0.232387885739037,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,1.96565443335525,2.36315962672562,0,0.614942192715568,0.343135620597051,0.329250856225877,0,0,0.277765335475589,0,0,0,1.62302566965108,0,0.288732895522148,0,0.190254152234598,0,0,0.492434012174795,0.234004265139238,0.594524649154913,0,0,0,0,0.290633938513962,0,0.985326475791887,0.968532774145487,6.42717158176393,9.94427678577034,6.05963680446624,0,0,0,0,0,0,0,0,0,0.07333828582095,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,1.74306691720059,0.199945982364114,1.2162378064119,0,0,0,0,0,0,0.821905290201534,0,0,3.15249216323084,3.23441362289276,2.05348858047597,0,0,0,0,0,0,0,0.414415513436035,0.24538298343828,0.500170521059677,0,0,0,0.315404830067869,0.468565659970853,0,0,0,0,0,0.0868836144680828,0,0,3.92859249633486,1.94142780736755,2.13455115606889,1.21251028578504,0,0,0.496215615637554,0.61384789315225,0,0.896974044789907,0,0.160853921143607,0,0.154209693802656,0,0.492762936082855,0,0.232420756919918,0,0,0,0,0,0.131124414959424,0.451199612907412,0.385076685522074,0.784349769176855,0,0,0,0.510281115829547,0.431831832204279,0,0.270946437543853,0,0.254876273045038,0.831076008928724,0.895499018888713,0,0,0.512900250232778,0,0,1.854738209659,0.366277859273374,0,0,0,0,0.290012154876366,0.308097234229289,0,0.413509717453592,0.214840489736547,0.725083469571143,0.170453254832202,0.356128142586949,0.165284915360978,0.384380134730212,0.638063562472921,0.30347334256665,0,0,0,0,0,0,0.37064843820784,0,0,0,0,0,0,0,0,0.359744915166629,0.274537029736055,0.353437207037059,0,0,0,0,0,0,0.136499911407986,0.424216295861138,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0,0,0,0.35667105148125,0.354761064070598,0,0,0,0.349934720244983,0,0,0,1.97701981631236,0,0,0,0,0.507447609232169,0,1.13929437434833,1.19115887728894,3.29089818468955,0,0,2.37937552888281,0,0.962479855263359,0.245040215981032,0.371606350251437,0.432807638929335,0,0.159426272728822,0,0,0,1.29848776109822,0,0.684704037099577,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0.935702702041099,1.46508179271894,0,1.67165076416218,0,1.19372242368845,1.48482340416319,1.22864280839693,1.9882952955326,2.39138007897872,0.890469640183247,0.16480387422676,0,3.18796781201712,4.42054264849836,1.25966373927138,0.20453736500431,0,0,0.629078458031288,0.537063524026827,0,2.86065876347107,0,0,4.84666373047609,2.41197055220813,0,0.520855522170466,0.437299999980979,2.17499872630438,0,0,0.709163045303809,1.03423011972439,0.874813840149763,0,2.65722415744152,1.20596438625408,3.05163472634166,3.09621927807429,0.886642856860642,2.19385397153973,0.10893846351899,0.975966209950223,5.925169904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| |||
|short_description=p3@NR3C2 | |||
}} |
Revision as of 02:42, 13 September 2013
Short description: | p3@NR3C2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_NR3C2_5end |
Coexpression cluster: | NA |
Association with transcript: | -21bp_to_ENST00000342437_5end |
EntrezGene: | NR3C2 |
HGNC: | 7979 |
UniProt: | B0ZBF8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.14e-14 | 18 |
alpha-beta T cell | 2.14e-14 | 18 |
immature T cell | 2.14e-14 | 18 |
mature T cell | 2.14e-14 | 18 |
immature alpha-beta T cell | 2.14e-14 | 18 |
CD8-positive, alpha-beta T cell | 2.29e-11 | 11 |
T cell | 5.58e-11 | 25 |
pro-T cell | 5.58e-11 | 25 |
lymphoid lineage restricted progenitor cell | 1.76e-07 | 52 |
lymphocyte | 3.33e-07 | 53 |
common lymphoid progenitor | 3.33e-07 | 53 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.