FFCP PHASE1:Hg19::chr4:164253724..164253729,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4886|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7956|TSSclassifier=S|UniProt=D6R9D0,B4DKL9,D6REY0,P25929|association_with_transcript=18bp_to_ENST00000504391,ENST00000509586,ENST00000512819,uc003iqm.1,uc011cjj.1_5end|coexpression_cluster_id=C217|description=CAGE_peak_6_at_NPY1R_5end|id=chr4:164253724..164253729,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000222;2.59e-10;1!CL:0002174;6.05e-10;1!CL:0000501;6.05e-10;1|ontology_enrichment_celltype_v019_2=CL:0002174,7.55e-10,1;CL:0000501,7.55e-10,1|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:171;1.98e-08;10|ontology_enrichment_disease_v019_2=DOID:171,2.46e-08,10|ontology_enrichment_uberon=UBERON:0007023!4.03e-36!115;UBERON:0001049!5.08e-36!57;UBERON:0005068!5.08e-36!57;UBERON:0006241!5.08e-36!57;UBERON:0007135!5.08e-36!57;UBERON:0002346!2.98e-30!90;UBERON:0001017!6.62e-29!82;UBERON:0005743!2.14e-28!86;UBERON:0002616!2.58e-28!59;UBERON:0001893!6.92e-28!34;UBERON:0001869!1.02e-27!32;UBERON:0002020!1.11e-27!34;UBERON:0003528!1.11e-27!34;UBERON:0003080!1.55e-27!42;UBERON:0000073!1.68e-27!94;UBERON:0001016!1.68e-27!94;UBERON:0003075!6.28e-27!86;UBERON:0007284!6.28e-27!86;UBERON:0002791!2.29e-26!33;UBERON:0002780!4.49e-26!41;UBERON:0001890!4.49e-26!41;UBERON:0006240!4.49e-26!41;UBERON:0000955!6.04e-24!69;UBERON:0006238!6.04e-24!69;UBERON:0003056!1.89e-20!61;UBERON:0002619!2.63e-20!22;UBERON:0000956!1.88e-19!25;UBERON:0000203!1.88e-19!25;UBERON:0001950!4.53e-17!20;UBERON:0000924!1.18e-15!173;UBERON:0006601!1.18e-15!173;UBERON:0000153!1.17e-13!129;UBERON:0007811!1.17e-13!129;UBERON:0004121!1.44e-13!169;UBERON:0000033!3.75e-13!123;UBERON:0000200!4.52e-11!6;UBERON:0002308!9.59e-10!9;UBERON:0000125!9.59e-10!9;UBERON:0003076!1.67e-09!15;UBERON:0003057!1.67e-09!15;UBERON:0000369!3.89e-09!4;UBERON:0002435!3.89e-09!4;UBERON:0000204!3.89e-09!4;UBERON:0010082!3.89e-09!4;UBERON:0001871!7.27e-08!7;UBERON:0000064!1.11e-07!219;UBERON:0002420!1.64e-07!9;UBERON:0007245!1.64e-07!9;UBERON:0010009!1.64e-07!9;UBERON:0010011!1.64e-07!9;UBERON:0000454!1.64e-07!9;UBERON:0002298!2.55e-07!8;UBERON:0005383!2.93e-07!3;UBERON:0005382!2.93e-07!3;UBERON:0009663!3.27e-07!7;UBERON:0000025!5.84e-07!194;UBERON:0000349!7.94e-07!5|ontology_enrichment_uberon_v019=UBERON:0000369;3.53e-20;4!UBERON:0002435;3.53e-20;4!UBERON:0000204;3.53e-20;4!UBERON:0002791;2.30e-19;32!UBERON:0001869;1.99e-18;32!UBERON:0002702;3.75e-18;2!UBERON:0003528;8.94e-17;34!UBERON:0002020;8.94e-17;34!UBERON:0001893;9.24e-15;34!UBERON:0002619;4.04e-13;22!UBERON:0005383;1.15e-12;3!UBERON:0005382;1.15e-12;3!UBERON:0001870;2.00e-12;3!UBERON:0002780;4.97e-12;41!UBERON:0001890;4.97e-12;41!UBERON:0009663;8.75e-12;7!UBERON:0000956;1.48e-11;25!UBERON:0000203;1.48e-11;25!UBERON:0001874;2.59e-10;1!UBERON:0001950;4.14e-10;20!UBERON:0001882;6.05e-10;1!UBERON:0002022;6.05e-10;1!UBERON:0000029;6.05e-10;1!UBERON:0005403;6.05e-10;1!UBERON:0002346;9.01e-10;4!UBERON:0000923;9.01e-10;4!UBERON:0010316;9.01e-10;4!UBERON:0005291;9.01e-10;4!UBERON:0002420;2.79e-09;9!UBERON:0000125;2.79e-09;9!UBERON:0007245;2.79e-09;9!UBERON:0002308;2.79e-09;9!UBERON:0010009;2.79e-09;9!UBERON:0010011;2.79e-09;9!UBERON:0000454;2.79e-09;9!UBERON:0000073;4.87e-09;53!UBERON:0002616;4.87e-09;53!UBERON:0002050;5.49e-08;5!UBERON:0005423;5.49e-08;5!UBERON:0000349;5.49e-08;5|ontology_enrichment_uberon_v019_2=UBERON:0000369,2.72e-20,4;UBERON:0002435,2.72e-20,4;UBERON:0000204,2.72e-20,4;UBERON:0010082,2.72e-20,4;UBERON:0002791,6.79e-20,32;UBERON:0001869,6.79e-20,32;UBERON:0003528,1.09e-18,34;UBERON:0002020,1.09e-18,34;UBERON:0001893,1.09e-18,34;UBERON:0002702,3.77e-18,2;UBERON:0002780,2.29e-15,41;UBERON:0001890,2.29e-15,41;UBERON:0003080,2.29e-15,41;UBERON:0006240,2.29e-15,41;UBERON:0002619,5.03e-13,22;UBERON:0005383,9.38e-13,3;UBERON:0005382,9.38e-13,3;UBERON:0001870,2.00e-12,3;UBERON:0009663,7.56e-12,7;UBERON:0000073,1.14e-11,53;UBERON:0002616,1.14e-11,53;UBERON:0000956,1.80e-11,25;UBERON:0000203,1.80e-11,25;UBERON:0001049,5.46e-11,56;UBERON:0005068,5.46e-11,56;UBERON:0006241,5.46e-11,56;UBERON:0007135,5.46e-11,56;UBERON:0001874,2.59e-10,1;UBERON:0002346,2.97e-10,86;UBERON:0000029,4.85e-10,1;UBERON:0001950,5.10e-10,20;UBERON:0003056,5.32e-10,61;UBERON:0001882,5.79e-10,1;UBERON:0005403,5.79e-10,1;UBERON:0002022,9.82e-10,1;UBERON:0002420,2.49e-09,9;UBERON:0000125,2.49e-09,9;UBERON:0007245,2.49e-09,9;UBERON:0002308,2.49e-09,9;UBERON:0010009,2.49e-09,9;UBERON:0010011,2.49e-09,9;UBERON:0000454,2.49e-09,9;UBERON:0000955,1.03e-08,68;UBERON:0006238,1.03e-08,68;UBERON:0000349,5.31e-08,5;UBERON:0001016,7.89e-08,89;UBERON:0001017,3.79e-07,81;UBERON:0003075,3.79e-07,82;UBERON:0007284,3.79e-07,82|phase1_expression=0.181678379270557,0,0.140954404095971,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4886 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7956 | |||
|TSSclassifier=S | |||
|UniProt=D6R9D0,B4DKL9,D6REY0,P25929 | |||
|association_with_transcript=18bp_to_ENST00000504391,ENST00000509586,ENST00000512819,uc003iqm.1,uc011cjj.1_5end | |||
|coexpression_cluster_id=C217 | |||
|description=CAGE_peak_6_at_NPY1R_5end | |||
|id=chr4:164253724..164253729,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000222;2.59e-10;1!CL:0002174;6.05e-10;1!CL:0000501;6.05e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002174,7.55e-10,1;CL:0000501,7.55e-10,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;1.98e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.46e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.03e-36!115;UBERON:0001049!5.08e-36!57;UBERON:0005068!5.08e-36!57;UBERON:0006241!5.08e-36!57;UBERON:0007135!5.08e-36!57;UBERON:0002346!2.98e-30!90;UBERON:0001017!6.62e-29!82;UBERON:0005743!2.14e-28!86;UBERON:0002616!2.58e-28!59;UBERON:0001893!6.92e-28!34;UBERON:0001869!1.02e-27!32;UBERON:0002020!1.11e-27!34;UBERON:0003528!1.11e-27!34;UBERON:0003080!1.55e-27!42;UBERON:0000073!1.68e-27!94;UBERON:0001016!1.68e-27!94;UBERON:0003075!6.28e-27!86;UBERON:0007284!6.28e-27!86;UBERON:0002791!2.29e-26!33;UBERON:0002780!4.49e-26!41;UBERON:0001890!4.49e-26!41;UBERON:0006240!4.49e-26!41;UBERON:0000955!6.04e-24!69;UBERON:0006238!6.04e-24!69;UBERON:0003056!1.89e-20!61;UBERON:0002619!2.63e-20!22;UBERON:0000956!1.88e-19!25;UBERON:0000203!1.88e-19!25;UBERON:0001950!4.53e-17!20;UBERON:0000924!1.18e-15!173;UBERON:0006601!1.18e-15!173;UBERON:0000153!1.17e-13!129;UBERON:0007811!1.17e-13!129;UBERON:0004121!1.44e-13!169;UBERON:0000033!3.75e-13!123;UBERON:0000200!4.52e-11!6;UBERON:0002308!9.59e-10!9;UBERON:0000125!9.59e-10!9;UBERON:0003076!1.67e-09!15;UBERON:0003057!1.67e-09!15;UBERON:0000369!3.89e-09!4;UBERON:0002435!3.89e-09!4;UBERON:0000204!3.89e-09!4;UBERON:0010082!3.89e-09!4;UBERON:0001871!7.27e-08!7;UBERON:0000064!1.11e-07!219;UBERON:0002420!1.64e-07!9;UBERON:0007245!1.64e-07!9;UBERON:0010009!1.64e-07!9;UBERON:0010011!1.64e-07!9;UBERON:0000454!1.64e-07!9;UBERON:0002298!2.55e-07!8;UBERON:0005383!2.93e-07!3;UBERON:0005382!2.93e-07!3;UBERON:0009663!3.27e-07!7;UBERON:0000025!5.84e-07!194;UBERON:0000349!7.94e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000369;3.53e-20;4!UBERON:0002435;3.53e-20;4!UBERON:0000204;3.53e-20;4!UBERON:0002791;2.30e-19;32!UBERON:0001869;1.99e-18;32!UBERON:0002702;3.75e-18;2!UBERON:0003528;8.94e-17;34!UBERON:0002020;8.94e-17;34!UBERON:0001893;9.24e-15;34!UBERON:0002619;4.04e-13;22!UBERON:0005383;1.15e-12;3!UBERON:0005382;1.15e-12;3!UBERON:0001870;2.00e-12;3!UBERON:0002780;4.97e-12;41!UBERON:0001890;4.97e-12;41!UBERON:0009663;8.75e-12;7!UBERON:0000956;1.48e-11;25!UBERON:0000203;1.48e-11;25!UBERON:0001874;2.59e-10;1!UBERON:0001950;4.14e-10;20!UBERON:0001882;6.05e-10;1!UBERON:0002022;6.05e-10;1!UBERON:0000029;6.05e-10;1!UBERON:0005403;6.05e-10;1!UBERON:0002346;9.01e-10;4!UBERON:0000923;9.01e-10;4!UBERON:0010316;9.01e-10;4!UBERON:0005291;9.01e-10;4!UBERON:0002420;2.79e-09;9!UBERON:0000125;2.79e-09;9!UBERON:0007245;2.79e-09;9!UBERON:0002308;2.79e-09;9!UBERON:0010009;2.79e-09;9!UBERON:0010011;2.79e-09;9!UBERON:0000454;2.79e-09;9!UBERON:0000073;4.87e-09;53!UBERON:0002616;4.87e-09;53!UBERON:0002050;5.49e-08;5!UBERON:0005423;5.49e-08;5!UBERON:0000349;5.49e-08;5 | |||
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|phase1_expression=0.181678379270557,0,0.140954404095971,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0.397589304964456,0.116193942869518,0,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0.37428108081644,1.61158997199083,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0.74214478529481,0,0,0,0.724999575434793,0,0,0,0,6.70690610781485,0.173624994933292,0.885741385813839,1.5677537021303,0,0.110579259931225,0,0.438770794307945,0,0,0.230850775511391,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0.468528891450678,0,0,0,0,0,0.91821828489147,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0.823040347426423,0,0,0.213452994739353,0.19980960958213,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0.136905378891993,0,1.28929632425987,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18091875923721,0.544813624446302,0.160753148465019,0.412618309791701,0,0,0,1.09349201984444,0,0.788057072991982,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439656701034247,1.32506888912221,0.129282956361551,0.26446520348538,0,0,0.106787412567695,0,0,1.48849806543585,0,0,0,1.63205341010842,2.0055191521816,4.59518365145192,0,0,1.77213635993397,0.366078794705889,1.001527445652,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429642228169954,0,0,0,0,0,2.52369796457302,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,3.05518553917245,1.2754495206101,0.495743057036009,1.11728983594649,0,0,0,0,0,1.41304295212211,0,0.478901577171454,0,1.00828678488687,0.138314504928436,0.484426936895553,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0.540300676947157,0,1.44680757550829,0.443910671357348,0,0,0,0,0,0,0,0,0,0,0,0,0.475788130837822,0.197318320688547,0,0.889851215136553,0,2.19961825882403,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0.588925401344836,0.297046400327086,0.4226557275834,0,0.845855261818682,0.902410431630081,0,0,0,0,0,0,0,0,0.271965960763659,1.30905207102113,0.5290268405154,0,0,0,0,0,0,0,0,0.275684698604535,0,0.0757786982182394,0,0,0.310298987585686,0.213233981900981,0,0,0.0620747142958579,0,0.0636471582781649,0,0,0.342233301085281,0,0.143444410785353,0,0,0,0,0,0,0.855690109280065,0,0,0,0 | |||
|short_description=p6@NPY1R | |||
}} |
Revision as of 03:09, 13 September 2013
Short description: | p6@NPY1R |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_NPY1R_5end |
Coexpression cluster: | C217_carcinoid_neuroectodermal_mature_mesodermal_colon_acute_occipital |
Association with transcript: | 18bp_to_ENST00000504391, ENST00000509586, ENST00000512819, uc003iqm.1, uc011cjj.1_5end |
EntrezGene: | NPY1R |
HGNC: | 7956 |
UniProt: | D6R9D0B4DKL9D6REY0P25929 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
follicular cell of ovary | 7.55e-10 | 1 |
granulosa cell | 7.55e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.46e-08 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.