FFCP PHASE1:Mm9::chr15:102300965..102300977,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=18521|HGNC=|MCL_coexpression_id=52|UniProt=Q61990,Q3TT81,Q3TF69|association_with_transcript=-85bp_to_ENSMUST00000077037,ENSMUST00000078404,ENSMUST00000108838,NM_001103165,NM_001103166,NM_001174073,NM_011042,uc007xvv.2,uc007xvx.2,uc007xvy.2,uc007xvz.2,uc007xwb.3,uc009vat.1_5end|description=CAGE_peak_1_at_Pcbp2_5end|id=chr15:102300965..102300977,+|ontology_enrichment_celltype=CL:0000034!4.94e-11!97;CL:0000144!1.16e-10!121;CL:0000012!1.16e-10!121;CL:0002319!1.70e-10!43;CL:0000221!1.70e-10!44;CL:0000133!1.70e-10!44;CL:0002371!4.93e-10!118;CL:0000723!9.50e-10!91;CL:0000048!9.50e-10!91;CL:0000548!3.05e-09!115;CL:0000004!3.05e-09!115;CL:0000255!3.05e-09!115;CL:0000055!6.09e-09!50;CL:0002321!1.43e-08!70;CL:0000220!1.43e-08!70;CL:0000540!2.73e-07!33;CL:0000047!2.73e-07!33;CL:0000031!2.73e-07!33;CL:0000404!2.73e-07!33;CL:0000117!6.19e-07!23;CL:0000337!6.19e-07!23|ontology_enrichment_celltype_v019_2=CL:0000034,4.94e-11,97;CL:0002319,1.70e-10,43;CL:0000221,1.70e-10,44;CL:0000133,1.70e-10,44;CL:0000723,9.50e-10,91;CL:0000048,9.50e-10,91;CL:0002321,1.43e-08,70;CL:0000540,2.73e-07,33;CL:0000047,2.73e-07,33;CL:0000031,2.73e-07,33;CL:0000404,2.73e-07,33;CL:0000117,6.19e-07,23;CL:0000337,6.19e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=289.869413259677,158.43483506827,150.604748237936,511.46698131985,474.348256259191,253.665579858865,215.858079910266,176.382459821193,316.352258674795,151.907877582974,251.861631259718,161.219533329575,257.485897816533,203.339856026588,357.09366466639,246.412400413418,375.664728554815,253.000656617307,189.355032809525,163.81440559404,355.055736380716,298.468599309861,289.931765944218,240.788596304077,174.580462892116,200.406955476142,185.658420344561,155.785701231898,206.365433529622,165.835825382034,91.7964314112962,645.191164234985,604.608686195632,301.115193929334,477.760579068608,331.471882844834,370.975720328725,347.79978514237,375.822300715948,513.576792838296,329.997864785399,343.571878934098,526.293222685771,264.886905020615,272.602568049275,441.980579205329,808.210258711524,401.384312896402,510.111316309444,323.725781958682,406.940527664929,744.638283410553,358.886994357498,447.548441620999,418.100686133225,252.6287661873,307.736914494225,255.257685677334,462.293113064181,285.655128806898,659.818491049933,509.961020764044,908.859281625584,715.420275238712,657.596131107038,704.085793911585,672.901848224337,900.991925979045,518.240682317771,570.265083513061,570.611620146299,447.61509256076,339.695815983582,432.147539630358,789.862526661286,792.366594057838,251.064208678606,421.751277695375,436.856980580756,385.107960172166,601.531256685843,543.312645490701,364.612996695804,206.533877881627,364.576619195469,355.02744549577,342.261520641043,382.491662833517,276.627784246121,352.541327898154,198.847039249351,215.966393122328,469.180220258348,410.714128836379,246.265262212667,389.783391774682,201.537742889064,745.121370311268,403.447665148255,537.076153255717,319.432876053511,739.160509906471,2117.43154196223,2879.82014777099,183.58440277751,202.941252245554,199.176631335825,235.789711619859,568.109716721895,263.039470422869,317.825118635561,176.28551194273,252.062738500872,194.130761031778,285.035026096948,336.409464989541,306.027370055155,383.622093908526,309.613693182456,341.813353938876,410.544382817872,233.709872011177,212.486607788659,283.997373101201,264.740637412207,230.933177908567,307.565424606697,380.33833144982,349.570194678001,215.998102021754,166.53021942598,268.90031352153,269.775344938413,175.676519185937,250.38459369427,188.686588947802,282.604234684628,268.967870459021,231.241323966812,394.157596075366,326.732432279349,316.805099909326,382.451963706562,303.067388667623,294.393931827796,192.170580427275,317.555144532921,193.251417942045,479.854352268507,413.007679086517,319.175339233403,387.976446396807,263.588792265867,276.163968052078,240.14775318807,244.016011119473,255.605600182017,350.250501583127,457.503234026904,410.7304069379,301.835039195671,312.587738696322,332.389608761635,308.723079611677,335.685237642935,260.670552065207,387.923338423849,401.439247058329,427.032810525482,264.309617167343,213.697381962876,253.510778195526,158.515183240139,212.717173735189,198.093131547408,210.337027703257,259.378744642281,286.135513129955,272.369095933494,213.193264767883,316.111882623095,360.81182555116,285.533408296813,213.052701246066,187.438979310082,196.156455076297,267.923332581087,235.16654995264,214.265531743913,140.215827750059,217.867154273692,203.522381265963,341.402221715547,329.035716316019,481.262031324053,250.898435905427,269.400004675832,382.240218402236,266.225821293123,293.596584331429,248.685984900738,237.78633487731,351.592815725359,409.271044321579,304.469883430351,384.96393640287,412.617486904215,309.430295962351,192.497143946753,348.687718590382,317.785044479069,205.371937064685,1499.50239408031,267.197200425985,218.426371180192,191.454789483911,213.124127264032,300.079870288014,323.318082791558,300.343887656218,317.944669038392,223.384532880148,345.464045480675,300.506225850617,351.352413947756,502.274009585974,151.329738341943,311.157888956529,260.549091986334,233.669086784642,210.675677876393,273.097422601894,579.038530326805,238.230689512595,158.839860185149,248.067134927954,205.183654004398,208.050743701161,506.231111323174,309.276885825357,311.091104344429,269.793172308977,326.797294360656,460.970811250473,429.555843630856,512.368520727787,314.537915201393,319.143396839153,275.515581228727,400.687681577993,354.850213020672,346.337599132811,293.685187714498,339.838453323423,423.456991304481,234.526094525712,265.440083015051,227.646331265369,266.952911164219,321.884599897292,251.192300959511,255.927745552164,240.992227788072,331.522559074671,309.930709210496,358.91169050369,224.009260585993,283.416162005282,291.833190613894,363.729948448612,310.168068640336,270.228758667137,283.682511518057,386.366020426426,324.316300544048,242.971385280802,301.682848539188,487.238877442074,258.020153860057,279.731345816787,227.881804701988,160.037377251435,176.34590616106,341.182555699338,343.279599522886,350.651288669515,229.270824883703,188.368457004691,249.740354046313,185.996654816903,362.054055886912,371.851008823959,347.296534170517,276.854479224383,346.862416961715,331.00409248251,268.177261260533,257.596780689825,215.305487853731,171.412584255107,171.00999989572,155.22127359653,278.024117710896,230.516885155249,1551.84666019758,349.569684650822,243.554897952848,321.427814332711,270.718990009324,213.391586494853,341.157492743207,390.352745762162,201.120222608513,676.193954191991,603.422863110228,232.268173661711,311.791381116273,325.696445169667,238.144868518298,397.976344468811,380.276113051341,261.905884504012,270.862592838175,344.699460122976,220.466291652915,244.604325141975,239.064181454613,305.280173524765,211.079685339914,333.973855065206,474.383982360376,285.648919444571,449.595002623002,297.705164403605,317.746430938851,252.199786616024,257.885160032116,364.642919633709,269.951380770958,188.273021731435,208.53396689194,156.901955479787,177.436372620596,199.423988910881,245.708190084377,252.630195008788,212.070647404608,232.474379976567,456.97569141313,507.559638966111,320.979178817772,379.00337190947,257.404963707162,411.074084894232,214.912585784162,194.703129090755,177.468322904274,233.239526457985,192.897747216472,230.312762832399,229.889900838561,203.856085257104,234.738761621591,340.073695576115,398.410312598413,306.532751316827,361.3993350045,248.030180426459,242.065692184103,283.428862436462,278.016597478576,262.495628437985,235.461669799157,239.967027980795,243.842987839406,272.01408162673,259.114249217904,215.478632316572,252.811223622615,306.348940188002,237.35400503842,245.729830120942,331.027744443639,269.795424172982,256.622974464613,276.53904656016,484.915921794518,293.165996009836,216.100822798233|short_description=p1@Pcbp2}} | ||
|EntrezGene=18521 | |||
|HGNC= | |||
|MCL_coexpression_id=52 | |||
|UniProt=Q61990,Q3TT81,Q3TF69 | |||
|association_with_transcript=-85bp_to_ENSMUST00000077037,ENSMUST00000078404,ENSMUST00000108838,NM_001103165,NM_001103166,NM_001174073,NM_011042,uc007xvv.2,uc007xvx.2,uc007xvy.2,uc007xvz.2,uc007xwb.3,uc009vat.1_5end | |||
|description=CAGE_peak_1_at_Pcbp2_5end | |||
|id=chr15:102300965..102300977,+ | |||
|ontology_enrichment_celltype=CL:0000034!4.94e-11!97;CL:0000144!1.16e-10!121;CL:0000012!1.16e-10!121;CL:0002319!1.70e-10!43;CL:0000221!1.70e-10!44;CL:0000133!1.70e-10!44;CL:0002371!4.93e-10!118;CL:0000723!9.50e-10!91;CL:0000048!9.50e-10!91;CL:0000548!3.05e-09!115;CL:0000004!3.05e-09!115;CL:0000255!3.05e-09!115;CL:0000055!6.09e-09!50;CL:0002321!1.43e-08!70;CL:0000220!1.43e-08!70;CL:0000540!2.73e-07!33;CL:0000047!2.73e-07!33;CL:0000031!2.73e-07!33;CL:0000404!2.73e-07!33;CL:0000117!6.19e-07!23;CL:0000337!6.19e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,4.94e-11,97;CL:0002319,1.70e-10,43;CL:0000221,1.70e-10,44;CL:0000133,1.70e-10,44;CL:0000723,9.50e-10,91;CL:0000048,9.50e-10,91;CL:0002321,1.43e-08,70;CL:0000540,2.73e-07,33;CL:0000047,2.73e-07,33;CL:0000031,2.73e-07,33;CL:0000404,2.73e-07,33;CL:0000117,6.19e-07,23;CL:0000337,6.19e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=289.869413259677,158.43483506827,150.604748237936,511.46698131985,474.348256259191,253.665579858865,215.858079910266,176.382459821193,316.352258674795,151.907877582974,251.861631259718,161.219533329575,257.485897816533,203.339856026588,357.09366466639,246.412400413418,375.664728554815,253.000656617307,189.355032809525,163.81440559404,355.055736380716,298.468599309861,289.931765944218,240.788596304077,174.580462892116,200.406955476142,185.658420344561,155.785701231898,206.365433529622,165.835825382034,91.7964314112962,645.191164234985,604.608686195632,301.115193929334,477.760579068608,331.471882844834,370.975720328725,347.79978514237,375.822300715948,513.576792838296,329.997864785399,343.571878934098,526.293222685771,264.886905020615,272.602568049275,441.980579205329,808.210258711524,401.384312896402,510.111316309444,323.725781958682,406.940527664929,744.638283410553,358.886994357498,447.548441620999,418.100686133225,252.6287661873,307.736914494225,255.257685677334,462.293113064181,285.655128806898,659.818491049933,509.961020764044,908.859281625584,715.420275238712,657.596131107038,704.085793911585,672.901848224337,900.991925979045,518.240682317771,570.265083513061,570.611620146299,447.61509256076,339.695815983582,432.147539630358,789.862526661286,792.366594057838,251.064208678606,421.751277695375,436.856980580756,385.107960172166,601.531256685843,543.312645490701,364.612996695804,206.533877881627,364.576619195469,355.02744549577,342.261520641043,382.491662833517,276.627784246121,352.541327898154,198.847039249351,215.966393122328,469.180220258348,410.714128836379,246.265262212667,389.783391774682,201.537742889064,745.121370311268,403.447665148255,537.076153255717,319.432876053511,739.160509906471,2117.43154196223,2879.82014777099,183.58440277751,202.941252245554,199.176631335825,235.789711619859,568.109716721895,263.039470422869,317.825118635561,176.28551194273,252.062738500872,194.130761031778,285.035026096948,336.409464989541,306.027370055155,383.622093908526,309.613693182456,341.813353938876,410.544382817872,233.709872011177,212.486607788659,283.997373101201,264.740637412207,230.933177908567,307.565424606697,380.33833144982,349.570194678001,215.998102021754,166.53021942598,268.90031352153,269.775344938413,175.676519185937,250.38459369427,188.686588947802,282.604234684628,268.967870459021,231.241323966812,394.157596075366,326.732432279349,316.805099909326,382.451963706562,303.067388667623,294.393931827796,192.170580427275,317.555144532921,193.251417942045,479.854352268507,413.007679086517,319.175339233403,387.976446396807,263.588792265867,276.163968052078,240.14775318807,244.016011119473,255.605600182017,350.250501583127,457.503234026904,410.7304069379,301.835039195671,312.587738696322,332.389608761635,308.723079611677,335.685237642935,260.670552065207,387.923338423849,401.439247058329,427.032810525482,264.309617167343,213.697381962876,253.510778195526,158.515183240139,212.717173735189,198.093131547408,210.337027703257,259.378744642281,286.135513129955,272.369095933494,213.193264767883,316.111882623095,360.81182555116,285.533408296813,213.052701246066,187.438979310082,196.156455076297,267.923332581087,235.16654995264,214.265531743913,140.215827750059,217.867154273692,203.522381265963,341.402221715547,329.035716316019,481.262031324053,250.898435905427,269.400004675832,382.240218402236,266.225821293123,293.596584331429,248.685984900738,237.78633487731,351.592815725359,409.271044321579,304.469883430351,384.96393640287,412.617486904215,309.430295962351,192.497143946753,348.687718590382,317.785044479069,205.371937064685,1499.50239408031,267.197200425985,218.426371180192,191.454789483911,213.124127264032,300.079870288014,323.318082791558,300.343887656218,317.944669038392,223.384532880148,345.464045480675,300.506225850617,351.352413947756,502.274009585974,151.329738341943,311.157888956529,260.549091986334,233.669086784642,210.675677876393,273.097422601894,579.038530326805,238.230689512595,158.839860185149,248.067134927954,205.183654004398,208.050743701161,506.231111323174,309.276885825357,311.091104344429,269.793172308977,326.797294360656,460.970811250473,429.555843630856,512.368520727787,314.537915201393,319.143396839153,275.515581228727,400.687681577993,354.850213020672,346.337599132811,293.685187714498,339.838453323423,423.456991304481,234.526094525712,265.440083015051,227.646331265369,266.952911164219,321.884599897292,251.192300959511,255.927745552164,240.992227788072,331.522559074671,309.930709210496,358.91169050369,224.009260585993,283.416162005282,291.833190613894,363.729948448612,310.168068640336,270.228758667137,283.682511518057,386.366020426426,324.316300544048,242.971385280802,301.682848539188,487.238877442074,258.020153860057,279.731345816787,227.881804701988,160.037377251435,176.34590616106,341.182555699338,343.279599522886,350.651288669515,229.270824883703,188.368457004691,249.740354046313,185.996654816903,362.054055886912,371.851008823959,347.296534170517,276.854479224383,346.862416961715,331.00409248251,268.177261260533,257.596780689825,215.305487853731,171.412584255107,171.00999989572,155.22127359653,278.024117710896,230.516885155249,1551.84666019758,349.569684650822,243.554897952848,321.427814332711,270.718990009324,213.391586494853,341.157492743207,390.352745762162,201.120222608513,676.193954191991,603.422863110228,232.268173661711,311.791381116273,325.696445169667,238.144868518298,397.976344468811,380.276113051341,261.905884504012,270.862592838175,344.699460122976,220.466291652915,244.604325141975,239.064181454613,305.280173524765,211.079685339914,333.973855065206,474.383982360376,285.648919444571,449.595002623002,297.705164403605,317.746430938851,252.199786616024,257.885160032116,364.642919633709,269.951380770958,188.273021731435,208.53396689194,156.901955479787,177.436372620596,199.423988910881,245.708190084377,252.630195008788,212.070647404608,232.474379976567,456.97569141313,507.559638966111,320.979178817772,379.00337190947,257.404963707162,411.074084894232,214.912585784162,194.703129090755,177.468322904274,233.239526457985,192.897747216472,230.312762832399,229.889900838561,203.856085257104,234.738761621591,340.073695576115,398.410312598413,306.532751316827,361.3993350045,248.030180426459,242.065692184103,283.428862436462,278.016597478576,262.495628437985,235.461669799157,239.967027980795,243.842987839406,272.01408162673,259.114249217904,215.478632316572,252.811223622615,306.348940188002,237.35400503842,245.729830120942,331.027744443639,269.795424172982,256.622974464613,276.53904656016,484.915921794518,293.165996009836,216.100822798233 | |||
|short_description=p1@Pcbp2 | |||
}} |
Revision as of 10:07, 13 September 2013
Short description: | p1@Pcbp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pcbp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:52 |
Association with transcript: | -85bp_to_ENSMUST00000077037, ENSMUST00000078404, ENSMUST00000108838, NM_001103165, NM_001103166, NM_001174073, NM_011042, uc007xvv.2, uc007xvx.2, uc007xvy.2, uc007xvz.2, uc007xwb.3, uc009vat.1_5end |
EntrezGene: | Pcbp2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 4.94e-11 | 97 |
neural cell | 1.70e-10 | 43 |
ectodermal cell | 1.70e-10 | 44 |
neurectodermal cell | 1.70e-10 | 44 |
somatic stem cell | 9.50e-10 | 91 |
multi fate stem cell | 9.50e-10 | 91 |
embryonic cell | 1.43e-08 | 70 |
neuron | 2.73e-07 | 33 |
neuronal stem cell | 2.73e-07 | 33 |
neuroblast | 2.73e-07 | 33 |
electrically signaling cell | 2.73e-07 | 33 |
CNS neuron (sensu Vertebrata) | 6.19e-07 | 23 |
neuroblast (sensu Vertebrata) | 6.19e-07 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.